RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 SWAP70Q9UH65 585 aa20.51■□□□□ 0.87
PKD1-208ENST00000472577 SGSM2O43147 1006 aa20.5■□□□□ 0.87
PKD1-208ENST00000472577 FGAP02671 866 aa20.5■□□□□ 0.87
PKD1-208ENST00000472577 CDK8P49336 464 aa20.5■□□□□ 0.87
PKD1-208ENST00000472577 MOGSQ13724 837 aa20.5■□□□□ 0.87
PKD1-208ENST00000472577 ARHGEF6Q15052 776 aa20.5■□□□□ 0.87
PKD1-208ENST00000472577 NBPF11Q86T75 865 aa20.5■□□□□ 0.87
PKD1-208ENST00000472577 STK11IPQ8N1F8 1099 aa20.5■□□□□ 0.87
PKD1-208ENST00000472577 CPA4Q9UI42 421 aa20.5■□□□□ 0.87
PKD1-208ENST00000472577 TAOK2Q9UL54 1235 aa20.5■□□□□ 0.87
PKD1-208ENST00000472577 PHIPQ8WWQ0 1821 aa20.5■□□□□ 0.87
PKD1-208ENST00000472577 PPATQ06203 517 aa20.49■□□□□ 0.87
PKD1-208ENST00000472577 PPARAQ07869 468 aa20.49■□□□□ 0.87
PKD1-208ENST00000472577 CERKLQ49MI3 558 aaPredicted RBP20.49■□□□□ 0.87
PKD1-208ENST00000472577 C17orf99Q6UX52 265 aa20.49■□□□□ 0.87
PKD1-208ENST00000472577 ZBTB21Q9ULJ3 1066 aa20.49■□□□□ 0.87
PKD1-208ENST00000472577 ZMYM6O95789 1325 aa20.49■□□□□ 0.87
PKD1-208ENST00000472577 MYH8P13535 1937 aa20.49■□□□□ 0.87
PKD1-208ENST00000472577 CDC45O75419 566 aa20.48■□□□□ 0.87
PKD1-208ENST00000472577 SHISA4Q96DD7 197 aa20.48■□□□□ 0.87
PKD1-208ENST00000472577 TRIM47Q96LD4 638 aa20.48■□□□□ 0.87
PKD1-208ENST00000472577 DSCC1Q9BVC3 393 aa20.48■□□□□ 0.87
PKD1-208ENST00000472577 KCNH4Q9UQ05 1017 aa20.48■□□□□ 0.87
PKD1-208ENST00000472577 ZHX2Q9Y6X8 837 aa20.48■□□□□ 0.87
PKD1-208ENST00000472577 PDHXO00330 501 aa20.47■□□□□ 0.87
PKD1-208ENST00000472577 GH2P01242 217 aa20.47■□□□□ 0.87
PKD1-208ENST00000472577 ASNSP08243 561 aa20.47■□□□□ 0.87
PKD1-208ENST00000472577 FXR1P51114 621 aaKnown RBP eCLIP20.47■□□□□ 0.87
PKD1-208ENST00000472577 KIF22Q14807 665 aa20.47■□□□□ 0.87
PKD1-208ENST00000472577 MTFR1Q15390 333 aa20.47■□□□□ 0.87
PKD1-208ENST00000472577 ABCB5Q2M3G0 1257 aa20.47■□□□□ 0.87
PKD1-208ENST00000472577 ANKRD23Q86SG2 305 aa20.47■□□□□ 0.87
PKD1-208ENST00000472577 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
PKD1-208ENST00000472577 AKR1B1P15121 316 aa20.46■□□□□ 0.87
PKD1-208ENST00000472577 PTH1RQ03431 593 aa20.46■□□□□ 0.87
PKD1-208ENST00000472577 CTDSPL2Q05D32 466 aa20.46■□□□□ 0.87
PKD1-208ENST00000472577 GINM1Q9NU53 330 aa20.46■□□□□ 0.87
PKD1-208ENST00000472577 ANAPC4Q9UJX5 808 aa20.46■□□□□ 0.87
PKD1-208ENST00000472577 COLQQ9Y215 455 aaPredicted RBP20.46■□□□□ 0.87
PKD1-208ENST00000472577 AFG3L2Q9Y4W6 797 aa20.46■□□□□ 0.87
PKD1-208ENST00000472577 TACC3Q9Y6A5 838 aa20.46■□□□□ 0.87
PKD1-208ENST00000472577 USP17L5A8MUK1 530 aa20.45■□□□□ 0.86
PKD1-208ENST00000472577 RASA1P20936 1047 aa20.45■□□□□ 0.86
PKD1-208ENST00000472577 OSBPP22059 807 aa20.45■□□□□ 0.86
PKD1-208ENST00000472577 GUCY1A2P33402 732 aa20.45■□□□□ 0.86
PKD1-208ENST00000472577 PSMC4P43686 418 aa20.45■□□□□ 0.86
PKD1-208ENST00000472577 GTF3C3Q9Y5Q9 886 aa20.45■□□□□ 0.86
PKD1-208ENST00000472577 CEP290O15078 2479 aa20.45■□□□□ 0.86
PKD1-208ENST00000472577 LAMA4Q16363 1823 aa20.44■□□□□ 0.86
PKD1-208ENST00000472577 MPHOSPH10O00566 681 aaKnown RBP20.44■□□□□ 0.86
PKD1-208ENST00000472577 PRDM1O75626 825 aa20.44■□□□□ 0.86
PKD1-208ENST00000472577 GNRH1P01148 92 aa20.44■□□□□ 0.86
PKD1-208ENST00000472577 HAND2P61296 217 aa20.44■□□□□ 0.86
PKD1-208ENST00000472577 NBPF3Q9H094 633 aa20.44■□□□□ 0.86
PKD1-208ENST00000472577 MKNK2Q9HBH9 465 aa20.44■□□□□ 0.86
PKD1-208ENST00000472577 CABP5Q9NP86 173 aa20.44■□□□□ 0.86
PKD1-208ENST00000472577 INCENPQ9NQS7 918 aa20.44■□□□□ 0.86
PKD1-208ENST00000472577 SRRDQ9UH36 339 aa20.44■□□□□ 0.86
PKD1-208ENST00000472577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.44■□□□□ 0.86
PKD1-208ENST00000472577 TRIM75PA6NK02 468 aa20.43■□□□□ 0.86
PKD1-208ENST00000472577 SLC3A2P08195 630 aaKnown RBP20.43■□□□□ 0.86
PKD1-208ENST00000472577 SPP2Q13103 211 aa20.43■□□□□ 0.86
PKD1-208ENST00000472577 SEPT2Q15019 361 aa20.43■□□□□ 0.86
PKD1-208ENST00000472577 RAB3GAP1Q15042 981 aa20.43■□□□□ 0.86
PKD1-208ENST00000472577 GPAT2Q6NUI2 795 aa20.43■□□□□ 0.86
PKD1-208ENST00000472577 CCDC17Q96LX7 622 aa20.43■□□□□ 0.86
PKD1-208ENST00000472577 MGAMO43451 1857 aa20.43■□□□□ 0.86
PKD1-208ENST00000472577 PTPRFP10586 1907 aa20.43■□□□□ 0.86
PKD1-208ENST00000472577 H0YGN5 161 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 CXCL11O14625 94 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 CYP2C8P10632 490 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 PRMT2P55345 433 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 PDE4BQ07343 736 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 CASC1Q6TDU7 716 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 TMEM179Q6ZVK1 233 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 TBC1D10CQ8IV04 446 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 ZNF280CQ8ND82 737 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 WDR18Q9BV38 432 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 TBC1D2Q9BYX2 928 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 LSG1Q9H089 658 aaKnown RBP20.42■□□□□ 0.86
PKD1-208ENST00000472577 AS3MTQ9HBK9 375 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 GREB1LQ9C091 1923 aaPredicted RBP20.42■□□□□ 0.86
PKD1-208ENST00000472577 MYPNQ86TC9 1320 aa20.42■□□□□ 0.86
PKD1-208ENST00000472577 ZNF213O14771 459 aa20.41■□□□□ 0.86
PKD1-208ENST00000472577 FGRP09769 529 aa20.41■□□□□ 0.86
PKD1-208ENST00000472577 CLEC10AQ8IUN9 316 aa20.41■□□□□ 0.86
PKD1-208ENST00000472577 MAP4K1Q92918 833 aa20.41■□□□□ 0.86
PKD1-208ENST00000472577 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.41■□□□□ 0.86
PKD1-208ENST00000472577 ZNF287Q9HBT7 754 aa20.41■□□□□ 0.86
PKD1-208ENST00000472577 CTNNA3Q9UI47 895 aa20.41■□□□□ 0.86
PKD1-208ENST00000472577 A0A0G2JLL6 359 aaPredicted RBP20.4■□□□□ 0.86
PKD1-208ENST00000472577 FMNL1O95466 1100 aaPredicted RBP20.4■□□□□ 0.86
PKD1-208ENST00000472577 BCRP11274 1271 aa20.4■□□□□ 0.86
PKD1-208ENST00000472577 GRK4P32298 578 aa20.4■□□□□ 0.86
PKD1-208ENST00000472577 PRKCZQ05513 592 aa20.4■□□□□ 0.86
PKD1-208ENST00000472577 KIAA1211Q6ZU35 1233 aa20.4■□□□□ 0.86
PKD1-208ENST00000472577 PRRT2Q7Z6L0 340 aaPredicted RBP20.4■□□□□ 0.86
PKD1-208ENST00000472577 ZNF444Q8N0Y2 327 aaPredicted RBP20.4■□□□□ 0.86
PKD1-208ENST00000472577 TRIOBPQ9H2D6 2365 aa20.39■□□□□ 0.86
PKD1-208ENST00000472577 ORC4O43929 436 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms