RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 GCC1Q96CN9 775 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 IDI2Q9BXS1 227 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
SMC4-213ENST00000472282 IFIT2P09913 472 aaKnown RBP11.13□□□□□ -0.63
SMC4-213ENST00000472282 PPIL2Q13356 520 aa11.13□□□□□ -0.63
SMC4-213ENST00000472282 PICALMQ13492 652 aa11.13□□□□□ -0.63
SMC4-213ENST00000472282 CCDC158Q5M9N0 1113 aa11.13□□□□□ -0.63
SMC4-213ENST00000472282 TTC39AQ5SRH9 613 aa11.13□□□□□ -0.63
SMC4-213ENST00000472282 OTUD7BQ6GQQ9 843 aa11.13□□□□□ -0.63
SMC4-213ENST00000472282 ERICH6Q7L0X2 663 aa11.13□□□□□ -0.63
SMC4-213ENST00000472282 NSUN4Q96CB9 384 aaKnown RBP11.13□□□□□ -0.63
SMC4-213ENST00000472282 SNRKQ9NRH2 765 aa11.13□□□□□ -0.63
SMC4-213ENST00000472282 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.13□□□□□ -0.63
SMC4-213ENST00000472282 GPR75-ASB3A0A0A6YYF3 556 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 FAM196BA6NMK8 535 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 PHF20L1A8MW92 1017 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 ENTPD3O75355 529 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 UQCRFS1P1P0C7P4 283 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 MLLT3P42568 568 aaPredicted RBP11.12□□□□□ -0.63
SMC4-213ENST00000472282 SP3Q02447 781 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 PPATQ06203 517 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 MOGSQ13724 837 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 NOL9Q5SY16 702 aaKnown RBP11.12□□□□□ -0.63
SMC4-213ENST00000472282 ANKRD45Q5TZF3 282 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 SMC5Q8IY18 1101 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 KCNV2Q8TDN2 545 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 HOOK2Q96ED9 719 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 ARHGAP39Q9C0H5 1083 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 PTPN22Q9Y2R2 807 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 LOC285556D6RIA3 1793 aa11.12□□□□□ -0.63
SMC4-213ENST00000472282 CETPP11597 493 aa11.11□□□□□ -0.63
SMC4-213ENST00000472282 DNAJB2P25686 324 aa11.11□□□□□ -0.63
SMC4-213ENST00000472282 SNAPC2Q13487 334 aa11.11□□□□□ -0.63
SMC4-213ENST00000472282 SPTY2D1Q68D10 685 aaPredicted RBP11.11□□□□□ -0.63
SMC4-213ENST00000472282 B4GALNT3Q6L9W6 998 aa11.11□□□□□ -0.63
SMC4-213ENST00000472282 CCDC84Q86UT8 332 aaPredicted RBP11.11□□□□□ -0.63
SMC4-213ENST00000472282 ZFYVE28Q9HCC9 887 aa11.11□□□□□ -0.63
SMC4-213ENST00000472282 RAI14Q9P0K7 980 aa11.11□□□□□ -0.63
SMC4-213ENST00000472282 KCNH4Q9UQ05 1017 aa11.11□□□□□ -0.63
SMC4-213ENST00000472282 DOCK3Q8IZD9 2030 aa11.11□□□□□ -0.63
SMC4-213ENST00000472282 ADGRA2Q96PE1 1338 aa11.1□□□□□ -0.63
SMC4-213ENST00000472282 TNRC18O15417 2968 aaPredicted RBP11.1□□□□□ -0.63
SMC4-213ENST00000472282 CTGFP29279 349 aa11.1□□□□□ -0.63
SMC4-213ENST00000472282 COPS2P61201 443 aa11.1□□□□□ -0.63
SMC4-213ENST00000472282 MAP3K10Q02779 954 aa11.1□□□□□ -0.63
SMC4-213ENST00000472282 PTGDRQ13258 359 aa11.1□□□□□ -0.63
SMC4-213ENST00000472282 ADGRA1Q86SQ6 560 aa11.1□□□□□ -0.63
SMC4-213ENST00000472282 ZSCAN29Q8IWY8 852 aaPredicted RBP11.1□□□□□ -0.63
SMC4-213ENST00000472282 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
SMC4-213ENST00000472282 ZNF512BQ96KM6 892 aaPredicted RBP11.1□□□□□ -0.63
SMC4-213ENST00000472282 EFCC1Q9HA90 598 aa11.1□□□□□ -0.63
SMC4-213ENST00000472282 DDX60LQ5H9U9 1706 aaKnown RBP11.09□□□□□ -0.63
SMC4-213ENST00000472282 NAV1Q8NEY1 1877 aa11.09□□□□□ -0.63
SMC4-213ENST00000472282 TLR2O60603 784 aa11.09□□□□□ -0.63
SMC4-213ENST00000472282 CYP2E1P05181 493 aaPredicted RBP11.09□□□□□ -0.63
SMC4-213ENST00000472282 ZAP70P43403 619 aa11.09□□□□□ -0.63
SMC4-213ENST00000472282 RRP1BQ14684 758 aaKnown RBP11.09□□□□□ -0.63
SMC4-213ENST00000472282 GPAT2Q6NUI2 795 aa11.09□□□□□ -0.63
SMC4-213ENST00000472282 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
SMC4-213ENST00000472282 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
SMC4-213ENST00000472282 TMUB1Q9BVT8 246 aa11.09□□□□□ -0.63
SMC4-213ENST00000472282 LNPKQ9C0E8 428 aa11.09□□□□□ -0.63
SMC4-213ENST00000472282 PIH1D3Q9NQM4 214 aaKnown RBP11.09□□□□□ -0.63
SMC4-213ENST00000472282 CPA4Q9UI42 421 aa11.09□□□□□ -0.63
SMC4-213ENST00000472282 PTCH2Q9Y6C5 1203 aa11.09□□□□□ -0.63
SMC4-213ENST00000472282 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
SMC4-213ENST00000472282 COL2A1P02458 1487 aaPredicted RBP11.08□□□□□ -0.64
SMC4-213ENST00000472282 PDHXO00330 501 aa11.08□□□□□ -0.64
SMC4-213ENST00000472282 PTPRAP18433 802 aa11.08□□□□□ -0.64
SMC4-213ENST00000472282 TSHZ3Q63HK5 1081 aa11.08□□□□□ -0.64
SMC4-213ENST00000472282 C17orf99Q6UX52 265 aa11.08□□□□□ -0.64
SMC4-213ENST00000472282 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
SMC4-213ENST00000472282 GPATCH3Q96I76 525 aa11.08□□□□□ -0.64
SMC4-213ENST00000472282 OSBPL5Q9H0X9 879 aaPredicted RBP11.08□□□□□ -0.64
SMC4-213ENST00000472282 ZCCHC17Q9NP64 241 aaKnown RBP11.08□□□□□ -0.64
SMC4-213ENST00000472282 AATFQ9NY61 560 aaKnown RBP eCLIP11.08□□□□□ -0.644e-8■■■■■ 116
SMC4-213ENST00000472282 LRP2BPQ9P2M1 347 aa11.08□□□□□ -0.64
SMC4-213ENST00000472282 PCDHB3Q9Y5E6 796 aa11.08□□□□□ -0.64
SMC4-213ENST00000472282 ZHX2Q9Y6X8 837 aa11.08□□□□□ -0.64
SMC4-213ENST00000472282 SALL3Q9BXA9 1300 aa11.08□□□□□ -0.64
SMC4-213ENST00000472282 NRG2O14511 850 aaPredicted RBP11.07□□□□□ -0.64
SMC4-213ENST00000472282 LDHCP07864 332 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 CYP2C8P10632 490 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 GSTO1P78417 241 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 LACTBP83111 547 aaPredicted RBP11.07□□□□□ -0.64
SMC4-213ENST00000472282 NUCB1Q02818 461 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 CHD1LQ86WJ1 897 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 TEX11Q8IYF3 940 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMC4-213ENST00000472282 DNAJC2Q99543 621 aaKnown RBP11.07□□□□□ -0.64
SMC4-213ENST00000472282 BOLA2Q9H3K6 86 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 ANTXR1Q9H6X2 564 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 ECHDC1Q9NTX5 307 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 AFG3L2Q9Y4W6 797 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 MYH8P13535 1937 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 PLXNB2O15031 1838 aa11.07□□□□□ -0.64
SMC4-213ENST00000472282 KIAA0100Q14667 2235 aaKnown RBP11.07□□□□□ -0.64
SMC4-213ENST00000472282 BAZ2AQ9UIF9 1905 aaKnown RBP11.06□□□□□ -0.64
SMC4-213ENST00000472282 PDE4DIPQ5VU43 2346 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms