RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 VCAM1P19320 739 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 PDE3AQ14432 1141 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 TTF1Q15361 905 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 CCL14Q16627 93 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 SLFNL1Q499Z3 407 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 GPR142Q7Z601 462 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 CLASRPQ8N2M8 674 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 LCORLQ8N3X6 602 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 NUDT12Q9BQG2 462 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 PRO3102Q9H379 93 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 ZBTB40Q9NUA8 1239 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 DDX19BQ9UMR2 479 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 LAMA3Q16787 3333 aa11.93□□□□□ -0.5
NUDCD3-205ENST00000472246 TCRBV5S4A2TA0A5A2 114 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 USP17L15C9J2P7 530 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 USP17L13C9JLJ4 530 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 USP17L11C9JVI0 530 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 USP17L18D6R9N7 530 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 USP17L22D6RA61 530 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 USP17L17D6RBQ6 530 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 USP17L19D6RCP7 530 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 USP17L20D6RJB6 530 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 IFIT2P09913 472 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 CYP2D6P10635 497 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 MS4A1P11836 297 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 MAPK4P31152 587 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 GUCY1A2P33402 732 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 GABPAQ06546 454 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 USP17L24Q0WX57 530 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 SEPT2Q15019 361 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 MAP3K21Q5TCX8 1036 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 TMED8Q6PL24 325 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 NECAB2Q7Z6G3 386 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 CCAR1Q8IX12 1150 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 RPAP2Q8IXW5 612 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 SLC44A5Q8NCS7 719 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 GTF3C2Q8WUA4 911 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 USP6NLQ92738 828 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 CRNKL1Q9BZJ0 848 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 KIAA1683Q9H0B3 1180 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 CABP5Q9NP86 173 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 MCM9Q9NXL9 1143 aa11.92□□□□□ -0.5
NUDCD3-205ENST00000472246 MPHOSPH10O00566 681 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 HMMRO75330 724 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 CHGBP05060 677 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 XRCC5P13010 732 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 ZKSCAN1P17029 563 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 CAPN2P17655 700 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 USP14P54578 494 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 MORN1Q5T089 497 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 CATSPERGQ6ZRH7 1159 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 PLEKHH3Q7Z736 793 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 C7orf61Q8IZ16 206 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 ANKLE1Q8NAG6 615 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 BOLA2Q9H3K6 86 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 RPAP3Q9H6T3 665 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 ARMT1Q9H993 441 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 DCP1AQ9NPI6 582 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 RABGAP1Q9Y3P9 1069 aa11.91□□□□□ -0.5
NUDCD3-205ENST00000472246 MYH8P13535 1937 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 BAZ2AQ9UIF9 1905 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 A0A1W2PRG0 241 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 SPDYE16A6NNV3 312 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 SMIM22K7EJ46 135 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 PRKAB2O43741 272 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 RAB11FIP3O75154 756 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 CCND3P30281 292 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 RGS2P41220 211 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 CACNB2Q08289 660 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 WDR78Q5VTH9 848 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 DYNLL2Q96FJ2 89 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 APBA2Q99767 749 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 NBPF3Q9H094 633 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 PAG1Q9NWQ8 432 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 BTBD7Q9P203 1132 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 OGDHLQ9ULD0 1010 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 FRMPD3Q5JV73 1810 aa11.9□□□□□ -0.5
NUDCD3-205ENST00000472246 MYH7P12883 1935 aa11.9□□□□□ -0.51
NUDCD3-205ENST00000472246 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
NUDCD3-205ENST00000472246 MBD4O95243 580 aa11.89□□□□□ -0.51
NUDCD3-205ENST00000472246 ADD2P35612 726 aa11.89□□□□□ -0.51
NUDCD3-205ENST00000472246 MAP2K5Q13163 448 aa11.89□□□□□ -0.51
NUDCD3-205ENST00000472246 C20orf194Q5TEA3 1177 aa11.89□□□□□ -0.51
NUDCD3-205ENST00000472246 CLEC10AQ8IUN9 316 aa11.89□□□□□ -0.51
NUDCD3-205ENST00000472246 C11orf49Q9H6J7 331 aa11.89□□□□□ -0.51
NUDCD3-205ENST00000472246 STAP2Q9UGK3 403 aa11.89□□□□□ -0.51
NUDCD3-205ENST00000472246 RCAN3Q9UKA8 241 aa11.89□□□□□ -0.51
NUDCD3-205ENST00000472246 ZMYND8Q9ULU4 1186 aaPredicted RBP11.89□□□□□ -0.51
NUDCD3-205ENST00000472246 PFASO15067 1338 aa11.88□□□□□ -0.51
NUDCD3-205ENST00000472246 RLFQ13129 1914 aa11.88□□□□□ -0.51
NUDCD3-205ENST00000472246 CYP2D7A0A087X1C5 515 aa11.88□□□□□ -0.51
NUDCD3-205ENST00000472246 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
NUDCD3-205ENST00000472246 ATP5JP18859 108 aa11.88□□□□□ -0.51
NUDCD3-205ENST00000472246 CCNA1P78396 465 aa11.88□□□□□ -0.51
NUDCD3-205ENST00000472246 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
NUDCD3-205ENST00000472246 LBX2Q6XYB7 198 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms