RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 DOCK1Q14185 1865 aa19.81■□□□□ 0.76
CCM2-205ENST00000472223 ST18O60284 1047 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 NEK4P51957 841 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 ANKRD1Q15327 319 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 LDLRAD1Q5T700 205 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 IFIT1BQ5T764 474 aaKnown RBP19.8■□□□□ 0.76
CCM2-205ENST00000472223 SYNE3Q6ZMZ3 975 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 NFXL1Q6ZNB6 911 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.8■□□□□ 0.76
CCM2-205ENST00000472223 CYB5R4Q7L1T6 521 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 DGKHQ86XP1 1220 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 ERO1BQ86YB8 467 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 IL17RAQ96F46 866 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 FEZ1Q99689 392 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 UPF3BQ9BZI7 483 aaKnown RBP19.8■□□□□ 0.76
CCM2-205ENST00000472223 ELP3Q9H9T3 547 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 MTMR4Q9NYA4 1195 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 PLIN4Q96Q06 1357 aa19.8■□□□□ 0.76
CCM2-205ENST00000472223 TNKSO95271 1327 aa19.79■□□□□ 0.76
CCM2-205ENST00000472223 PTPRAP18433 802 aa19.79■□□□□ 0.76
CCM2-205ENST00000472223 APLP1P51693 650 aa19.79■□□□□ 0.76
CCM2-205ENST00000472223 PPATQ06203 517 aa19.79■□□□□ 0.76
CCM2-205ENST00000472223 RRP1BQ14684 758 aaKnown RBP19.79■□□□□ 0.76
CCM2-205ENST00000472223 CEP95Q96GE4 821 aa19.79■□□□□ 0.76
CCM2-205ENST00000472223 KAT14Q9H8E8 782 aa19.79■□□□□ 0.76
CCM2-205ENST00000472223 NYAP2Q9P242 653 aa19.79■□□□□ 0.76
CCM2-205ENST00000472223 CLIP2Q9UDT6 1046 aa19.79■□□□□ 0.76
CCM2-205ENST00000472223 ZHX2Q9Y6X8 837 aa19.79■□□□□ 0.76
CCM2-205ENST00000472223 CCDC69A6NI79 296 aa19.78■□□□□ 0.76
CCM2-205ENST00000472223 EXOSC10Q01780 885 aaKnown RBP19.78■□□□□ 0.76
CCM2-205ENST00000472223 TOP1P11387 765 aaKnown RBP19.77■□□□□ 0.76
CCM2-205ENST00000472223 EEF2P13639 858 aaKnown RBP19.77■□□□□ 0.76
CCM2-205ENST00000472223 ZNF157P51786 506 aaPredicted RBP19.77■□□□□ 0.76
CCM2-205ENST00000472223 USP14P54578 494 aa19.77■□□□□ 0.76
CCM2-205ENST00000472223 Q6ZUG5 572 aa19.77■□□□□ 0.76
CCM2-205ENST00000472223 SAPCD2Q86UD0 394 aa19.77■□□□□ 0.76
CCM2-205ENST00000472223 ZNF280CQ8ND82 737 aa19.77■□□□□ 0.76
CCM2-205ENST00000472223 GOPCQ9HD26 462 aa19.77■□□□□ 0.76
CCM2-205ENST00000472223 SNCAIPQ9Y6H5 919 aa19.77■□□□□ 0.76
CCM2-205ENST00000472223 TLL2Q9Y6L7 1015 aa19.77■□□□□ 0.76
CCM2-205ENST00000472223 IGKV6D-41A0A0C4DH26 115 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 SPDYE5A6NIY4 337 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 USP17L10C9JJH3 530 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 RAD21O60216 631 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 NMT2O60551 498 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 CPA1P15085 419 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 LIFRP42702 1097 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 RGMBQ6NW40 437 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 PAXIP1Q6ZW49 1069 aaPredicted RBP19.76■□□□□ 0.75
CCM2-205ENST00000472223 CATIPQ7Z7H3 387 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 ENAHQ8N8S7 591 aaPredicted RBP19.76■□□□□ 0.75
CCM2-205ENST00000472223 CCDC102AQ96A19 550 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 OPTNQ96CV9 577 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 OTUD5Q96G74 571 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 CLMNQ96JQ2 1002 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 WDR18Q9BV38 432 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 IL17RBQ9NRM6 502 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 CREBZFQ9NS37 354 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 NAP1L2Q9ULW6 460 aaPredicted RBP19.76■□□□□ 0.75
CCM2-205ENST00000472223 SYNPO2Q9UMS6 1093 aa19.76■□□□□ 0.75
CCM2-205ENST00000472223 C19orf81C9J6K1 198 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 GUCY1A2P33402 732 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 ANTXR2P58335 489 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 SPP2Q13103 211 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 PPIL2Q13356 520 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 IGDCC4Q8TDY8 1250 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 ANKS1AQ92625 1134 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 HHIPL1Q96JK4 782 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 TCEANC2Q96MN5 208 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.75■□□□□ 0.75
CCM2-205ENST00000472223 LRRC2Q9BYS8 371 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 TMOD4Q9NZQ9 345 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 SLC12A7Q9Y666 1083 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 OTOFQ9HC10 1997 aa19.75■□□□□ 0.75
CCM2-205ENST00000472223 TRIM75PA6NK02 468 aa19.74■□□□□ 0.75
CCM2-205ENST00000472223 SH2B2O14492 632 aaPredicted RBP19.74■□□□□ 0.75
CCM2-205ENST00000472223 CXCL11O14625 94 aa19.74■□□□□ 0.75
CCM2-205ENST00000472223 JAG1P78504 1218 aa19.74■□□□□ 0.75
CCM2-205ENST00000472223 SHROOM1Q2M3G4 852 aaPredicted RBP19.74■□□□□ 0.75
CCM2-205ENST00000472223 MKL1Q969V6 931 aa19.74■□□□□ 0.75
CCM2-205ENST00000472223 TMEM47Q9BQJ4 181 aa19.74■□□□□ 0.75
CCM2-205ENST00000472223 ALDH8A1Q9H2A2 487 aaPredicted RBP19.74■□□□□ 0.75
CCM2-205ENST00000472223 MYH4Q9Y623 1939 aa19.74■□□□□ 0.75
CCM2-205ENST00000472223 CALM1P0DP23 149 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 CALM2P0DP24 149 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 CALM3P0DP25 149 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 ZBTB48P10074 688 aaPredicted RBP19.73■□□□□ 0.75
CCM2-205ENST00000472223 MCM2P49736 904 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 SEC23AQ15436 765 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 USP17L2Q6R6M4 530 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 FBXL16Q8N461 479 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 PNMA1Q8ND90 353 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 BRF1Q92994 677 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 KIF2CQ99661 725 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 LY9Q9HBG7 655 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 ISY1Q9ULR0 285 aaKnown RBP19.73■□□□□ 0.75
CCM2-205ENST00000472223 TMX2Q9Y320 296 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 AFG3L2Q9Y4W6 797 aa19.73■□□□□ 0.75
CCM2-205ENST00000472223 GREB1LQ9C091 1923 aaPredicted RBP19.72■□□□□ 0.75
CCM2-205ENST00000472223 BACE1P56817 501 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms