RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 RAG1P15918 1043 aa8.43□□□□□ -1.06
HDAC9-221ENST00000471887 ITIH2P19823 946 aa8.43□□□□□ -1.06
HDAC9-221ENST00000471887 TNNI2P48788 182 aa8.43□□□□□ -1.06
HDAC9-221ENST00000471887 IFI16Q16666 785 aaKnown RBP8.43□□□□□ -1.06
HDAC9-221ENST00000471887 ARSHQ5FYA8 562 aa8.43□□□□□ -1.06
HDAC9-221ENST00000471887 PLD6Q8N2A8 252 aaKnown RBP8.43□□□□□ -1.06
HDAC9-221ENST00000471887 DNAJB8Q8NHS0 232 aa8.43□□□□□ -1.06
HDAC9-221ENST00000471887 PPP1R13LQ8WUF5 828 aa8.43□□□□□ -1.06
HDAC9-221ENST00000471887 TMEM40Q8WWA1 233 aa8.43□□□□□ -1.06
HDAC9-221ENST00000471887 GINM1Q9NU53 330 aa8.43□□□□□ -1.06
HDAC9-221ENST00000471887 EFR3BQ9Y2G0 817 aa8.43□□□□□ -1.06
HDAC9-221ENST00000471887 U3KQE9 123 aa8.43□□□□□ -1.06
HDAC9-221ENST00000471887 SOX9P48436 509 aa8.42□□□□□ -1.06
HDAC9-221ENST00000471887 CDCP2Q5VXM1 449 aa8.42□□□□□ -1.06
HDAC9-221ENST00000471887 FBXW10Q5XX13 1052 aa8.42□□□□□ -1.06
HDAC9-221ENST00000471887 C22orf34Q6ZV56 151 aa8.42□□□□□ -1.06
HDAC9-221ENST00000471887 NLRC3Q7RTR2 1065 aa8.42□□□□□ -1.06
HDAC9-221ENST00000471887 BAHD1Q8TBE0 780 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-221ENST00000471887 ATG4CQ96DT6 458 aa8.42□□□□□ -1.06
HDAC9-221ENST00000471887 KIF2CQ99661 725 aa8.42□□□□□ -1.06
HDAC9-221ENST00000471887 PPT2Q9UMR5 302 aa8.42□□□□□ -1.06
HDAC9-221ENST00000471887 CNTNAP4Q9C0A0 1308 aa8.41□□□□□ -1.06
HDAC9-221ENST00000471887 RGS13O14921 159 aa8.41□□□□□ -1.06
HDAC9-221ENST00000471887 PRNPP04156 253 aa8.41□□□□□ -1.06
HDAC9-221ENST00000471887 ZNF865P0CJ78 1059 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-221ENST00000471887 GBP1P32455 592 aa8.41□□□□□ -1.06
HDAC9-221ENST00000471887 KIR3DL1P43629 444 aa8.41□□□□□ -1.06
HDAC9-221ENST00000471887 CHMP4BP1P59074 171 aa8.41□□□□□ -1.06
HDAC9-221ENST00000471887 GNL2Q13823 731 aaKnown RBP8.41□□□□□ -1.06
HDAC9-221ENST00000471887 Q8N3U1 123 aa8.41□□□□□ -1.06
HDAC9-221ENST00000471887 MFSD4AQ8N468 514 aa8.41□□□□□ -1.06
HDAC9-221ENST00000471887 MISP3Q96FF7 219 aa8.41□□□□□ -1.06
HDAC9-221ENST00000471887 CNNM2Q9H8M5 875 aa8.41□□□□□ -1.06
HDAC9-221ENST00000471887 ANGEL1Q9UNK9 670 aaKnown RBP8.41□□□□□ -1.06
HDAC9-221ENST00000471887 TMEM265A0A087WTH1 108 aa8.4□□□□□ -1.06
HDAC9-221ENST00000471887 CBX7O95931 251 aa8.4□□□□□ -1.06
HDAC9-221ENST00000471887 VSIG10LQ86VR7 867 aa8.4□□□□□ -1.06
HDAC9-221ENST00000471887 STK11IPQ8N1F8 1099 aa8.4□□□□□ -1.06
HDAC9-221ENST00000471887 SEC16BQ96JE7 1060 aa8.4□□□□□ -1.06
HDAC9-221ENST00000471887 TNKS2Q9H2K2 1166 aa8.4□□□□□ -1.06
HDAC9-221ENST00000471887 ANTXR1Q9H6X2 564 aa8.4□□□□□ -1.06
HDAC9-221ENST00000471887 CAPN10Q9HC96 672 aa8.4□□□□□ -1.06
HDAC9-221ENST00000471887 CCDC39Q9UFE4 941 aa8.4□□□□□ -1.06
HDAC9-221ENST00000471887 PLAGL2Q9UPG8 496 aa8.4□□□□□ -1.06
HDAC9-221ENST00000471887 PRR33A8MZF0 331 aa8.39□□□□□ -1.07
HDAC9-221ENST00000471887 FAM155AB1AL88 458 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-221ENST00000471887 WNT11O96014 354 aa8.39□□□□□ -1.07
HDAC9-221ENST00000471887 NME1P15531 152 aaKnown RBP8.39□□□□□ -1.07
HDAC9-221ENST00000471887 NASPP49321 788 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-221ENST00000471887 NKPD1Q17RQ9 610 aa8.39□□□□□ -1.07
HDAC9-221ENST00000471887 VPS37DQ86XT2 251 aa8.39□□□□□ -1.07
HDAC9-221ENST00000471887 SPACA3Q8IXA5 215 aa8.39□□□□□ -1.07
HDAC9-221ENST00000471887 HRASLS5Q96KN8 279 aa8.39□□□□□ -1.07
HDAC9-221ENST00000471887 CRBNQ96SW2 442 aa8.39□□□□□ -1.07
HDAC9-221ENST00000471887 SNX11Q9Y5W9 270 aa8.39□□□□□ -1.07
HDAC9-221ENST00000471887 CAPN6Q9Y6Q1 641 aa8.39□□□□□ -1.07
HDAC9-221ENST00000471887 CCNFP41002 786 aa8.38□□□□□ -1.07
HDAC9-221ENST00000471887 CLCN7P51798 805 aa8.38□□□□□ -1.07
HDAC9-221ENST00000471887 PRKCQQ04759 706 aa8.38□□□□□ -1.07
HDAC9-221ENST00000471887 XP32Q5T750 250 aa8.38□□□□□ -1.07
HDAC9-221ENST00000471887 CCDC81Q6ZN84 652 aa8.38□□□□□ -1.07
HDAC9-221ENST00000471887 RBBP8NLQ8NC74 664 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-221ENST00000471887 RNF141Q8WVD5 230 aa8.38□□□□□ -1.07
HDAC9-221ENST00000471887 KREMEN1Q96MU8 473 aa8.38□□□□□ -1.07
HDAC9-221ENST00000471887 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.38□□□□□ -1.07
HDAC9-221ENST00000471887 VAV3Q9UKW4 847 aa8.38□□□□□ -1.07
HDAC9-221ENST00000471887 SLC5A6Q9Y289 635 aa8.38□□□□□ -1.07
HDAC9-221ENST00000471887 TNFRSF10CO14798 259 aa8.37□□□□□ -1.07
HDAC9-221ENST00000471887 UBOX5O94941 541 aa8.37□□□□□ -1.07
HDAC9-221ENST00000471887 POLR2BP30876 1174 aaKnown RBP8.37□□□□□ -1.07
HDAC9-221ENST00000471887 INTS3Q68E01 1043 aaKnown RBP8.37□□□□□ -1.07
HDAC9-221ENST00000471887 NBPF11Q86T75 865 aa8.37□□□□□ -1.07
HDAC9-221ENST00000471887 TM9SF2Q99805 663 aa8.37□□□□□ -1.07
HDAC9-221ENST00000471887 ASPNQ9BXN1 380 aa8.37□□□□□ -1.07
HDAC9-221ENST00000471887 SRRTQ9BXP5 876 aaKnown RBP8.37□□□□□ -1.07
HDAC9-221ENST00000471887 ATF4P18848 351 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-221ENST00000471887 EIF6P56537 245 aaKnown RBP8.36□□□□□ -1.07
HDAC9-221ENST00000471887 AOC3Q16853 763 aa8.36□□□□□ -1.07
HDAC9-221ENST00000471887 PIWIL2Q8TC59 973 aaKnown RBP8.36□□□□□ -1.07
HDAC9-221ENST00000471887 BCL7CQ8WUZ0 217 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-221ENST00000471887 CPLX3Q8WVH0 158 aa8.36□□□□□ -1.07
HDAC9-221ENST00000471887 ASB11Q8WXH4 323 aa8.36□□□□□ -1.07
HDAC9-221ENST00000471887 KCNH3Q9ULD8 1083 aa8.36□□□□□ -1.07
HDAC9-221ENST00000471887 STRIP2Q9ULQ0 834 aa8.36□□□□□ -1.07
HDAC9-221ENST00000471887 RNF4P78317 190 aa8.35□□□□□ -1.07
HDAC9-221ENST00000471887 TNK2Q07912 1038 aa8.35□□□□□ -1.07
HDAC9-221ENST00000471887 CDKAL1Q5VV42 579 aa8.35□□□□□ -1.07
HDAC9-221ENST00000471887 LSRQ86X29 649 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-221ENST00000471887 TAB3Q8N5C8 712 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-221ENST00000471887 FLCNQ8NFG4 579 aa8.35□□□□□ -1.07
HDAC9-221ENST00000471887 OR6P1Q8NGX9 317 aa8.35□□□□□ -1.07
HDAC9-221ENST00000471887 Q96M66 194 aa8.35□□□□□ -1.07
HDAC9-221ENST00000471887 FBXL18Q96ME1 805 aa8.35□□□□□ -1.07
HDAC9-221ENST00000471887 TINF2Q9BSI4 451 aa8.35□□□□□ -1.07
HDAC9-221ENST00000471887 COL17A1Q9UMD9 1497 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-221ENST00000471887 ADAMTS4O75173 837 aa8.34□□□□□ -1.07
HDAC9-221ENST00000471887 CLEC3AO75596 197 aa8.34□□□□□ -1.07
HDAC9-221ENST00000471887 GUCY2CP25092 1073 aa8.34□□□□□ -1.07
HDAC9-221ENST00000471887 BNIP3Q12983 259 aa8.34□□□□□ -1.07
HDAC9-221ENST00000471887 HSPA12BQ96MM6 686 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms