RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 UBOX5O94941 541 aa9.13□□□□□ -0.95
SMC5-202ENST00000471372 SLFN14P0C7P3 912 aa9.13□□□□□ -0.95
SMC5-202ENST00000471372 PMS1P54277 932 aaKnown RBP9.13□□□□□ -0.95
SMC5-202ENST00000471372 BRDTQ58F21 947 aaPredicted RBP9.13□□□□□ -0.95
SMC5-202ENST00000471372 RNF180Q86T96 592 aa9.13□□□□□ -0.95
SMC5-202ENST00000471372 FMNL3Q8IVF7 1028 aa9.13□□□□□ -0.95
SMC5-202ENST00000471372 ZNF417Q8TAU3 575 aa9.13□□□□□ -0.95
SMC5-202ENST00000471372 ZNF587Q96SQ5 575 aaPredicted RBP9.13□□□□□ -0.95
SMC5-202ENST00000471372 LGR4Q9BXB1 951 aa9.13□□□□□ -0.95
SMC5-202ENST00000471372 FBRSQ9HAH7 460 aa9.13□□□□□ -0.95
SMC5-202ENST00000471372 PICK1Q9NRD5 415 aa9.13□□□□□ -0.95
SMC5-202ENST00000471372 SUCOQ9UBS9 1254 aaKnown RBP9.13□□□□□ -0.95
SMC5-202ENST00000471372 THRAP3Q9Y2W1 955 aaKnown RBP9.13□□□□□ -0.95
SMC5-202ENST00000471372 IGF1RP08069 1367 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 RGS13O14921 159 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 PLD2O14939 933 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 EPHX1P07099 455 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 EPXP11678 715 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 NTF4P34130 210 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 CCNFP41002 786 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 YARSP54577 528 aaKnown RBP9.12□□□□□ -0.95
SMC5-202ENST00000471372 ERVK-24P63145 666 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 NFKB2Q00653 900 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 BBS9Q3SYG4 887 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 CT47A1Q5JQC4 288 aaPredicted RBP9.12□□□□□ -0.95
SMC5-202ENST00000471372 GOLGA6L1Q8N7Z2 621 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 DHRS1Q96LJ7 313 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 DPH2Q9BQC3 489 aaPredicted RBP9.12□□□□□ -0.95
SMC5-202ENST00000471372 KCNK4Q9NYG8 393 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 APEX2Q9UBZ4 518 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 PPP1R9AQ9ULJ8 1098 aa9.12□□□□□ -0.95
SMC5-202ENST00000471372 TRBV23-1A0A0A0MS06 115 aa9.11□□□□□ -0.95
SMC5-202ENST00000471372 TRAV20A0A0B4J274 112 aa9.11□□□□□ -0.95
SMC5-202ENST00000471372 ANKRD34BA5PLL1 514 aa9.11□□□□□ -0.95
SMC5-202ENST00000471372 GSG1L2A8MUP6 293 aa9.11□□□□□ -0.95
SMC5-202ENST00000471372 ZNF143P52747 638 aaPredicted RBP9.11□□□□□ -0.95
SMC5-202ENST00000471372 PPP2R2AP63151 447 aa9.11□□□□□ -0.95
SMC5-202ENST00000471372 ID3Q02535 119 aa9.11□□□□□ -0.95
SMC5-202ENST00000471372 FAM50AQ14320 339 aaKnown RBP9.11□□□□□ -0.95
SMC5-202ENST00000471372 NKG7Q16617 165 aa9.11□□□□□ -0.95
SMC5-202ENST00000471372 FOXD4L6Q3SYB3 417 aaPredicted RBP9.11□□□□□ -0.95
SMC5-202ENST00000471372 FNDC3BQ53EP0 1204 aaKnown RBP9.11□□□□□ -0.95
SMC5-202ENST00000471372 FOXD4L3Q6VB84 417 aaPredicted RBP9.11□□□□□ -0.95
SMC5-202ENST00000471372 C1orf229Q6ZS94 237 aaPredicted RBP9.11□□□□□ -0.95
SMC5-202ENST00000471372 RAVER1Q8IY67 606 aaKnown RBP9.11□□□□□ -0.95
SMC5-202ENST00000471372 CEP89Q96ST8 783 aa9.11□□□□□ -0.95
SMC5-202ENST00000471372 HAUS7Q99871 368 aa9.11□□□□□ -0.95
SMC5-202ENST00000471372 RAD18Q9NS91 495 aa9.11□□□□□ -0.95
SMC5-202ENST00000471372 FANCGO15287 622 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 TMPRSS2O15393 492 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 ITGAVP06756 1048 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 SDSP20132 328 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 SOX5P35711 763 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 EXOSC10Q01780 885 aaKnown RBP9.1□□□□□ -0.95
SMC5-202ENST00000471372 HSP90AA2PQ14568 343 aaPredicted RBP9.1□□□□□ -0.95
SMC5-202ENST00000471372 HP1BP3Q5SSJ5 553 aaPredicted RBP9.1□□□□□ -0.95
SMC5-202ENST00000471372 AXDND1Q5T1B0 1012 aaPredicted RBP9.1□□□□□ -0.95
SMC5-202ENST00000471372 SLC6A19Q695T7 634 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 MRPL41Q8IXM3 137 aaKnown RBP9.1□□□□□ -0.95
SMC5-202ENST00000471372 BAHD1Q8TBE0 780 aaPredicted RBP9.1□□□□□ -0.95
SMC5-202ENST00000471372 PPP1R14AQ96A00 147 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 FGD4Q96M96 766 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 APBA2Q99767 749 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 AARSD1Q9BTE6 412 aaKnown RBP9.1□□□□□ -0.95
SMC5-202ENST00000471372 RUSC1Q9BVN2 902 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 TARS2Q9BW92 718 aaKnown RBP9.1□□□□□ -0.95
SMC5-202ENST00000471372 LRP2BPQ9P2M1 347 aa9.1□□□□□ -0.95
SMC5-202ENST00000471372 GDF2Q9UK05 429 aaPredicted RBP9.1□□□□□ -0.95
SMC5-202ENST00000471372 CBFA2T2O43439 604 aa9.09□□□□□ -0.95
SMC5-202ENST00000471372 HEATR6Q6AI08 1181 aaKnown RBP9.09□□□□□ -0.95
SMC5-202ENST00000471372 CNNM4Q6P4Q7 775 aa9.09□□□□□ -0.95
SMC5-202ENST00000471372 UBE3DQ7Z6J8 389 aa9.09□□□□□ -0.95
SMC5-202ENST00000471372 HID1Q8IV36 788 aa9.09□□□□□ -0.95
SMC5-202ENST00000471372 IPO9Q96P70 1041 aaKnown RBP9.09□□□□□ -0.95
SMC5-202ENST00000471372 NAT2P11245 290 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 GBP1P32455 592 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 CD68P34810 354 aaPredicted RBP9.08□□□□□ -0.96
SMC5-202ENST00000471372 GRIA2P42262 883 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 AKAP4Q5JQC9 854 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 RNFT1Q5M7Z0 435 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 ZNF227Q86WZ6 799 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 SCUBE1Q8IWY4 988 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 DMRTC2Q8IXT2 367 aaPredicted RBP9.08□□□□□ -0.96
SMC5-202ENST00000471372 ZNF513Q8N8E2 541 aaPredicted RBP9.08□□□□□ -0.96
SMC5-202ENST00000471372 LRRN4CLQ8ND94 238 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 UBASH3BQ8TF42 649 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 ZNF512BQ96KM6 892 aaPredicted RBP9.08□□□□□ -0.96
SMC5-202ENST00000471372 CCDC74BQ96LY2 380 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 KLHL25Q9H0H3 589 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 DISC1Q9NRI5 854 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 CRIM1Q9NZV1 1036 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 EID1Q9Y6B2 187 aa9.08□□□□□ -0.96
SMC5-202ENST00000471372 SYNGAP1Q96PV0 1343 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 DEAF1O75398 565 aaPredicted RBP9.07□□□□□ -0.96
SMC5-202ENST00000471372 CLEC3AO75596 197 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 MAP4K4O95819 1239 aaPredicted RBP9.07□□□□□ -0.96
SMC5-202ENST00000471372 KRT76Q01546 638 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 DCAF15Q66K64 600 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 ILDR2Q71H61 639 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 LRRTM3Q86VH5 581 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms