RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 FSD2A1L4K1 749 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 H7C1D1 291 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 IGSF3O75054 1194 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 ZIC2O95409 532 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-216ENST00000470998 CSF1RP07333 972 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 KCNJ4P48050 445 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 SMCPP49901 116 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-216ENST00000470998 GMPSP49915 693 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-216ENST00000470998 MCCD1P59942 119 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-216ENST00000470998 MAP2K1Q02750 393 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-216ENST00000470998 IFIT5Q13325 482 aaKnown RBP6.71□□□□□ -1.34
HDAC8-216ENST00000470998 EPHA10Q5JZY3 1008 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 CCDC158Q5M9N0 1113 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 CDC37L1Q7L3B6 337 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 SYAP1Q96A49 352 aaPredicted RBP6.71□□□□□ -1.34
HDAC8-216ENST00000470998 AIDAQ96BJ3 306 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 HHIPL1Q96JK4 782 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 CDC5LQ99459 802 aaKnown RBP6.71□□□□□ -1.34
HDAC8-216ENST00000470998 DSCC1Q9BVC3 393 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 ZC3H12CQ9C0D7 883 aaKnown RBP6.71□□□□□ -1.34
HDAC8-216ENST00000470998 SIL1Q9H173 461 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 PRDM10Q9NQV6 1147 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 AAASQ9NRG9 546 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 CEP126Q9P2H0 1117 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 PALD1Q9ULE6 856 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 KIF3AQ9Y496 699 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 RBM8AQ9Y5S9 174 aaKnown RBP6.71□□□□□ -1.34
HDAC8-216ENST00000470998 ADAMTSL1Q8N6G6 1762 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 COL4A5P29400 1685 aa6.71□□□□□ -1.34
HDAC8-216ENST00000470998 CACNA1SQ13698 1873 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 ANKRD36CQ5JPF3 1778 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 RAD17O75943 681 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 UPP2O95045 317 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 NR3C2P08235 984 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 ATP2B4P23634 1241 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 CTCFP49711 727 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-216ENST00000470998 VEGFBP49765 207 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 GPSM2P81274 684 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 TFCP2Q12800 502 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 TTF1Q15361 905 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-216ENST00000470998 MCMDC2Q4G0Z9 681 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 TAF7LQ5H9L4 462 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 COL13A1Q5TAT6 717 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-216ENST00000470998 CREB3L3Q68CJ9 461 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 ZSCAN25Q6NSZ9 544 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 TMED8Q6PL24 325 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-216ENST00000470998 BLOC1S2Q6QNY1 142 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 RUFY3Q7L099 469 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 ATG9AQ7Z3C6 839 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 ANKRD18AQ8IVF6 992 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 TMEM87AQ8NBN3 555 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 RGS22Q8NE09 1264 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 TBC1D16Q8TBP0 767 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 OCSTAMPQ9BR26 566 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 CCDC8Q9H0W5 538 aaPredicted RBP6.7□□□□□ -1.34
HDAC8-216ENST00000470998 BCL11AQ9H165 835 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 PAG1Q9NWQ8 432 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 CTNNA3Q9UI47 895 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 CNOT7Q9UIV1 285 aaKnown RBP6.7□□□□□ -1.34
HDAC8-216ENST00000470998 GGA1Q9UJY5 639 aa6.7□□□□□ -1.34
HDAC8-216ENST00000470998 ABT1Q9ULW3 272 aaKnown RBP6.7□□□□□ -1.34
HDAC8-216ENST00000470998 A0A1B0GUL7 405 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 ANKRD18BA2A2Z9 1011 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 YDJCA8MPS7 323 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 ECE2O60344 883 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 TAF5LO75529 589 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 VIL1P09327 827 aaKnown RBP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 NCLP19338 710 aaKnown RBP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 CASTP20810 708 aaKnown RBP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 MAP2K2P36507 400 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 GRM5P41594 1212 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 MMP14P50281 582 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 CTSWP56202 376 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 ZNF445P59923 1031 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 NMIQ13287 307 aaPredicted RBP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 PODNQ7Z5L7 613 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 SLC51AQ86UW1 340 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 TNS4Q8IZW8 715 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 FBXL16Q8N461 479 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 AGBL3Q8NEM8 1001 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 ANP32BQ92688 251 aaKnown RBP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 JAKMIP1Q96N16 626 aaKnown RBP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 UPF3BQ9BZI7 483 aaKnown RBP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 BOLA2Q9H3K6 86 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 PDRG1Q9NUG6 133 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 BSDC1Q9NW68 430 aaPredicted RBP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 TLR7Q9NYK1 1049 aaKnown RBP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 ANKIB1Q9P2G1 1089 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 POLLQ9UGP5 575 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 SMC3Q9UQE7 1217 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 CHMP3Q9Y3E7 222 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 DDX49Q9Y6V7 483 aaKnown RBP6.69□□□□□ -1.34
HDAC8-216ENST00000470998 XDHP47989 1333 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 MROH5Q6ZUA9 1318 aa6.69□□□□□ -1.34
HDAC8-216ENST00000470998 A0A0D9SFI3 127 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 PSMD14O00487 310 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 SLC27A2O14975 620 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 FOXN1O15353 648 aa6.68□□□□□ -1.34
HDAC8-216ENST00000470998 UFL1O94874 794 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms