RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 SHROOM1Q2M3G4 852 aaPredicted RBP15.34■□□□□ 0.05
HIGD1A-205ENST00000470543 FOXP4Q8IVH2 680 aaPredicted RBP15.34■□□□□ 0.05
HIGD1A-205ENST00000470543 DNAJC18Q9H819 358 aa15.34■□□□□ 0.05
HIGD1A-205ENST00000470543 PALD1Q9ULE6 856 aa15.34■□□□□ 0.05
HIGD1A-205ENST00000470543 RLFQ13129 1914 aa15.34■□□□□ 0.05
HIGD1A-205ENST00000470543 GNAI3P08754 354 aa15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 USP14P54578 494 aa15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 JAG1P78504 1218 aa15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 TTC39AQ5SRH9 613 aa15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 ARRDC4Q8NCT1 418 aa15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 MYLIPQ8WY64 445 aa15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 SYMPKQ92797 1274 aaKnown RBP15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 PRDM6Q9NQX0 595 aa15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 EMILIN3Q9NT22 766 aa15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 FLRT1Q9NZU1 646 aa15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 NOB1Q9ULX3 412 aaKnown RBP15.33■□□□□ 0.04
HIGD1A-205ENST00000470543 GH2P01242 217 aa15.32■□□□□ 0.04
HIGD1A-205ENST00000470543 PTPREP23469 700 aa15.32■□□□□ 0.04
HIGD1A-205ENST00000470543 CYP2C19P33261 490 aa15.32■□□□□ 0.04
HIGD1A-205ENST00000470543 G3BP1Q13283 466 aaKnown RBP eCLIP15.32■□□□□ 0.04
HIGD1A-205ENST00000470543 SHHQ15465 462 aa15.32■□□□□ 0.04
HIGD1A-205ENST00000470543 GJC2Q5T442 439 aaPredicted RBP15.32■□□□□ 0.04
HIGD1A-205ENST00000470543 SEMA6BQ9H3T3 888 aa15.32■□□□□ 0.04
HIGD1A-205ENST00000470543 RAB3GAP1Q15042 981 aa15.31■□□□□ 0.04
HIGD1A-205ENST00000470543 C9orf50Q5SZB4 431 aa15.31■□□□□ 0.04
HIGD1A-205ENST00000470543 DPP9Q86TI2 863 aa15.31■□□□□ 0.04
HIGD1A-205ENST00000470543 SNRKQ9NRH2 765 aa15.31■□□□□ 0.04
HIGD1A-205ENST00000470543 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
HIGD1A-205ENST00000470543 DNAH12Q6ZR08 3092 aa15.31■□□□□ 0.04
HIGD1A-205ENST00000470543 MYO5AQ9Y4I1 1855 aaKnown RBP15.31■□□□□ 0.04
HIGD1A-205ENST00000470543 CNMDO75829 334 aa15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 VCAM1P19320 739 aa15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 LAMA2P24043 3122 aaKnown RBP15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 USP5P45974 858 aa15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 SMAD3P84022 425 aaKnown RBP15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 GRB14Q14449 540 aa15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 TRIM60Q495X7 471 aa15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 CCDC158Q5M9N0 1113 aa15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 BADQ92934 168 aa15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 C12orf42Q96LP6 360 aa15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 ZNF236Q9UL36 1845 aa15.3■□□□□ 0.04
HIGD1A-205ENST00000470543 HOXC6P09630 235 aa15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 CYBAP13498 195 aa15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 PPP4CP60510 307 aa15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 SLFN5Q08AF3 891 aa15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 OS9Q13438 667 aaPredicted RBP15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 ANO1Q5XXA6 986 aa15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 SLC39A5Q6ZMH5 540 aa15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 CATSPERGQ6ZRH7 1159 aa15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 METTL16Q86W50 562 aaKnown RBP15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 NPLOC4Q8TAT6 608 aa15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 RNPC3Q96LT9 517 aaKnown RBP15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.29■□□□□ 0.04
HIGD1A-205ENST00000470543 MTX1Q13505 466 aa15.28■□□□□ 0.04
HIGD1A-205ENST00000470543 ABCB5Q2M3G0 1257 aa15.28■□□□□ 0.04
HIGD1A-205ENST00000470543 ADGRA1Q86SQ6 560 aa15.28■□□□□ 0.04
HIGD1A-205ENST00000470543 RPAP3Q9H6T3 665 aaPredicted RBP15.28■□□□□ 0.04
HIGD1A-205ENST00000470543 SLC5A4Q9NY91 659 aa15.28■□□□□ 0.04
HIGD1A-205ENST00000470543 SERPINB13Q9UIV8 391 aa15.28■□□□□ 0.04
HIGD1A-205ENST00000470543 EYSQ5T1H1 3165 aa15.27■□□□□ 0.04
HIGD1A-205ENST00000470543 SPDYE16A6NNV3 312 aaPredicted RBP15.27■□□□□ 0.04
HIGD1A-205ENST00000470543 ADORA2AP29274 412 aa15.27■□□□□ 0.04
HIGD1A-205ENST00000470543 POTEEQ6S8J3 1075 aa15.27■□□□□ 0.04
HIGD1A-205ENST00000470543 TRPV1Q8NER1 839 aa15.27■□□□□ 0.04
HIGD1A-205ENST00000470543 TANGO6Q9C0B7 1094 aa15.27■□□□□ 0.04
HIGD1A-205ENST00000470543 KIAA1683Q9H0B3 1180 aa15.27■□□□□ 0.04
HIGD1A-205ENST00000470543 TTYH1Q9H313 450 aaPredicted RBP15.27■□□□□ 0.04
HIGD1A-205ENST00000470543 PDLIM7Q9NR12 457 aa15.27■□□□□ 0.04
HIGD1A-205ENST00000470543 BTBD7Q9P203 1132 aa15.27■□□□□ 0.04
HIGD1A-205ENST00000470543 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.03
HIGD1A-205ENST00000470543 TMEM265A0A087WTH1 108 aa15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 SEPT4O43236 478 aa15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 CT47B1P0C2W7 299 aaPredicted RBP15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 CYP7A1P22680 504 aa15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 DYNLL1P63167 89 aaKnown RBP15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 CERKLQ49MI3 558 aaPredicted RBP15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 OLFML2BQ68BL8 750 aa15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 LBX2Q6XYB7 198 aa15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 CERS3Q8IU89 383 aa15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 FERMT2Q96AC1 680 aa15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 VCANP13611 3396 aa15.26■□□□□ 0.03
HIGD1A-205ENST00000470543 IDH1O75874 414 aaKnown RBP15.25■□□□□ 0.03
HIGD1A-205ENST00000470543 GNAI2P04899 355 aa15.25■□□□□ 0.03
HIGD1A-205ENST00000470543 ADCYAP1R1P41586 468 aa15.25■□□□□ 0.03
HIGD1A-205ENST00000470543 PLS1Q14651 629 aa15.25■□□□□ 0.03
HIGD1A-205ENST00000470543 TJAP1Q5JTD0 557 aa15.25■□□□□ 0.03
HIGD1A-205ENST00000470543 TTC6Q86TZ1 520 aa15.25■□□□□ 0.03
HIGD1A-205ENST00000470543 MIGA1Q8NAN2 632 aa15.25■□□□□ 0.03
HIGD1A-205ENST00000470543 ACER1Q8TDN7 264 aa15.25■□□□□ 0.03
HIGD1A-205ENST00000470543 CDCA7LQ96GN5 454 aa15.25■□□□□ 0.03
HIGD1A-205ENST00000470543 A0A0G2JMZ2 1700 aa15.24■□□□□ 0.03
HIGD1A-205ENST00000470543 MYH8P13535 1937 aa15.24■□□□□ 0.03
HIGD1A-205ENST00000470543 MPHOSPH10O00566 681 aaKnown RBP15.24■□□□□ 0.03
HIGD1A-205ENST00000470543 STRNO43815 780 aa15.24■□□□□ 0.03
HIGD1A-205ENST00000470543 IGSF3O75054 1194 aa15.24■□□□□ 0.03
HIGD1A-205ENST00000470543 CYP2E1P05181 493 aaPredicted RBP15.24■□□□□ 0.03
HIGD1A-205ENST00000470543 ZAP70P43403 619 aa15.24■□□□□ 0.03
HIGD1A-205ENST00000470543 SNX17Q15036 470 aa15.24■□□□□ 0.03
HIGD1A-205ENST00000470543 TNNI3KQ59H18 835 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms