RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 FANCBQ8NB91 859 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 KRT23Q9C075 422 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 CCDC113Q9H0I3 377 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 C19orf44Q9H6X5 657 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 KAT14Q9H8E8 782 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 TRIM49BA6NDI0 452 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 SMIM23A6NLE4 172 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 EXOC5O00471 708 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 PLEKHA8P1O95397 391 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 FOXO4P98177 505 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
CHD3-208ENST00000470531 ZNF444Q8N0Y2 327 aaPredicted RBP12.07□□□□□ -0.48
CHD3-208ENST00000470531 SMARCC2Q8TAQ2 1214 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 KCNB2Q92953 911 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.07□□□□□ -0.48
CHD3-208ENST00000470531 LCMT1Q9UIC8 334 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 GDAQ9Y2T3 454 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 LUC7L2Q9Y383 392 aaKnown RBP12.07□□□□□ -0.48
CHD3-208ENST00000470531 WTIPA6NIX2 430 aaPredicted RBP12.07□□□□□ -0.48
CHD3-208ENST00000470531 PP2D1A8MPX8 630 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 FANCGO15287 622 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 LLGL1Q15334 1064 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 ILDR1Q86SU0 546 aaPredicted RBP12.07□□□□□ -0.48
CHD3-208ENST00000470531 RIN2Q8WYP3 895 aaPredicted RBP12.07□□□□□ -0.48
CHD3-208ENST00000470531 RNF41Q9H4P4 317 aaPredicted RBP12.07□□□□□ -0.48
CHD3-208ENST00000470531 NLRC4Q9NPP4 1024 aa12.07□□□□□ -0.48
CHD3-208ENST00000470531 TMCO5BA8MYB1 307 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 TBC1D8BQ0IIM8 1120 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 RILPL1Q5EBL4 403 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 KCTD16Q68DU8 428 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 MYCBPQ99417 103 aaPredicted RBP12.06□□□□□ -0.48
CHD3-208ENST00000470531 OVOS2A0A0J9YW53 1432 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 OVOS2Q6IE36 1432 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 EXOSC10Q01780 885 aaKnown RBP12.06□□□□□ -0.48
CHD3-208ENST00000470531 TTC38Q5R3I4 469 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
CHD3-208ENST00000470531 ENGASEQ8NFI3 743 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 NELFBQ8WX92 580 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 KANSL2Q9H9L4 492 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 DIP2CQ9Y2E4 1556 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 N4BP1O75113 896 aaKnown RBP12.06□□□□□ -0.48
CHD3-208ENST00000470531 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
CHD3-208ENST00000470531 RASGRF1Q13972 1273 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 FEZ2Q9UHY8 353 aaPredicted RBP12.05□□□□□ -0.48
CHD3-208ENST00000470531 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.05□□□□□ -0.48
CHD3-208ENST00000470531 ZMYM6O95789 1325 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 A0A1W2PQ27 194 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 A0A1W2PQ64 194 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 A0A1W2PQD8 194 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 HPDP32754 393 aaPredicted RBP12.05□□□□□ -0.48
CHD3-208ENST00000470531 TXKP42681 527 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 RFX5P48382 616 aaPredicted RBP12.05□□□□□ -0.48
CHD3-208ENST00000470531 SLC7A5Q01650 507 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 ZFYVE27Q5T4F4 411 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 MAATS1Q7Z4T9 603 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 VSTM4Q8IW00 320 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 HPS3Q969F9 1004 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 CCDC42Q96M95 316 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 GPR101Q96P66 508 aaPredicted RBP12.05□□□□□ -0.48
CHD3-208ENST00000470531 MRPL44Q9H9J2 332 aaKnown RBP12.05□□□□□ -0.48
CHD3-208ENST00000470531 NRKQ7Z2Y5 1582 aa12.05□□□□□ -0.48
CHD3-208ENST00000470531 PDE8BO95263 885 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 DEXIO95424 95 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 RBM5P52756 815 aaKnown RBP eCLIP12.04□□□□□ -0.48
CHD3-208ENST00000470531 INF2Q27J81 1249 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 TYW1BQ6NUM6 668 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 FAM43BQ6ZT52 329 aaPredicted RBP12.04□□□□□ -0.48
CHD3-208ENST00000470531 IQUBQ8NA54 791 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 MARCH10Q8NA82 808 aaPredicted RBP12.04□□□□□ -0.48
CHD3-208ENST00000470531 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
CHD3-208ENST00000470531 MED23Q9ULK4 1368 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 NEO1Q92859 1461 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 SOS2Q07890 1332 aaPredicted RBP12.04□□□□□ -0.48
CHD3-208ENST00000470531 BUB1O43683 1085 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 FOXP4Q8IVH2 680 aaPredicted RBP12.04□□□□□ -0.48
CHD3-208ENST00000470531 TXLNBQ8N3L3 684 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 NAPGQ99747 312 aaPredicted RBP12.04□□□□□ -0.48
CHD3-208ENST00000470531 L2HGDHQ9H9P8 463 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 ABCB6Q9NP58 842 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 XRN1Q8IZH2 1706 aaKnown RBP12.04□□□□□ -0.48
CHD3-208ENST00000470531 CTSWP56202 376 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 PUM3Q15397 648 aaKnown RBP12.04□□□□□ -0.48
CHD3-208ENST00000470531 CSGALNACT2Q8N6G5 542 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 MLKLQ8NB16 471 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 TRIM31Q9BZY9 425 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 GOPCQ9HD26 462 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 TCP11L1Q9NUJ3 509 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 UBN2Q6ZU65 1347 aa12.04□□□□□ -0.48
CHD3-208ENST00000470531 H7C1W4 665 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 SH2B2O14492 632 aaPredicted RBP12.03□□□□□ -0.48
CHD3-208ENST00000470531 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 ADD2P35612 726 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 NAPAP54920 295 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 PPARAQ07869 468 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 CCDC40Q4G0X9 1142 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 ATL3Q6DD88 541 aa12.03□□□□□ -0.48
CHD3-208ENST00000470531 TMEM87BQ96K49 555 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms