RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 COL22A1Q8NFW1 1626 aaPredicted RBP7.56□□□□□ -1.2
CHD6-206ENST00000470470 PRPF40AO75400 957 aaKnown RBP7.55□□□□□ -1.2
CHD6-206ENST00000470470 NMIQ13287 307 aaPredicted RBP7.55□□□□□ -1.2
CHD6-206ENST00000470470 DOC2BQ14184 412 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 KRT32Q14532 448 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 ANKRD1Q15327 319 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 CREB3L3Q68CJ9 461 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 UBE3BQ7Z3V4 1068 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 ZNF594Q96JF6 807 aaPredicted RBP7.55□□□□□ -1.2
CHD6-206ENST00000470470 PLA2G12BQ9BX93 195 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 ETNK1Q9HBU6 452 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 PDRG1Q9NUG6 133 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 RBM8AQ9Y5S9 174 aaKnown RBP7.55□□□□□ -1.2
CHD6-206ENST00000470470 PALLDQ8WX93 1383 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 ANKRD36CQ5JPF3 1778 aa7.55□□□□□ -1.2
CHD6-206ENST00000470470 SLC27A2O14975 620 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 TAF5LO75529 589 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 IL15P40933 162 aaPredicted RBP7.54□□□□□ -1.2
CHD6-206ENST00000470470 TFCP2Q12800 502 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 TCIRG1Q13488 830 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 ZSCAN23Q3MJ62 389 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 LMBR1LQ6UX01 489 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 ATG9AQ7Z3C6 839 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 GPT2Q8TD30 523 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 FSD1Q9BTV5 496 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 ZCCHC2Q9C0B9 1178 aaKnown RBP7.54□□□□□ -1.2
CHD6-206ENST00000470470 BOLA2Q9H3K6 86 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 DBNLQ9UJU6 430 aaKnown RBP7.54□□□□□ -1.2
CHD6-206ENST00000470470 NOVA2Q9UNW9 492 aaKnown RBP7.54□□□□□ -1.2
CHD6-206ENST00000470470 ATP6V1DQ9Y5K8 247 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 WNK3Q9BYP7 1800 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 DISP2A7MBM2 1401 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 MYH3P11055 1940 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 LAMA4Q16363 1823 aa7.54□□□□□ -1.2
CHD6-206ENST00000470470 EYA2O00167 538 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 PTCD1O75127 700 aaKnown RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 A1BGP04217 495 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 CSF1RP07333 972 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 SPATA31C1P0DKV0 1188 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 ZSCAN22P10073 491 aaPredicted RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 ATP4AP20648 1035 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 CASTP20810 708 aaKnown RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 PLA2G4AP47712 749 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 EVA1CP58658 441 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 CCDC173Q0VFZ6 552 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 ELOAQ14241 798 aaKnown RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 ADCK5Q3MIX3 580 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 FOXD4L6Q3SYB3 417 aaPredicted RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 PRPF40BQ6NWY9 871 aaKnown RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 FOXD4L3Q6VB84 417 aaPredicted RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 TTLL7Q6ZT98 887 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 KBTBD3Q8NAB2 608 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 TPCN2Q8NHX9 752 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 KLHDC4Q8TBB5 520 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 FAM200AQ8TCP9 573 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 SYAP1Q96A49 352 aaPredicted RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 FAM227BQ96M60 508 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 JAKMIP1Q96N16 626 aaKnown RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 PANK2Q9BZ23 570 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 SIL1Q9H173 461 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 HELLSQ9NRZ9 838 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 TLR7Q9NYK1 1049 aaKnown RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 SMC3Q9UQE7 1217 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 ABCC12Q96J65 1359 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 SH3TC1Q8TE82 1336 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 CDHR2Q9BYE9 1310 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 ZNF335Q9H4Z2 1342 aaPredicted RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 AHDC1Q5TGY3 1603 aaPredicted RBP7.53□□□□□ -1.2
CHD6-206ENST00000470470 MYH7P12883 1935 aa7.53□□□□□ -1.2
CHD6-206ENST00000470470 A0A0D9SFI3 127 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 ATXN7O15265 892 aaPredicted RBP7.52□□□□□ -1.2
CHD6-206ENST00000470470 STX6O43752 255 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 LETM1O95202 739 aaPredicted RBP7.52□□□□□ -1.2
CHD6-206ENST00000470470 PCCAP05165 728 aaPredicted RBP7.52□□□□□ -1.2
CHD6-206ENST00000470470 SYT1P21579 422 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 RPS6KB1P23443 525 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 GATA4P43694 442 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 CLDN10P78369 228 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 PTK7Q13308 1070 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 MCMDC2Q4G0Z9 681 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 CRTC2Q53ET0 693 aaPredicted RBP7.52□□□□□ -1.2
CHD6-206ENST00000470470 HS1BP3Q53T59 392 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 CCDC102BQ68D86 513 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 CAVIN1Q6NZI2 390 aaKnown RBP7.52□□□□□ -1.2
CHD6-206ENST00000470470 BLOC1S2Q6QNY1 142 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 LRSAM1Q6UWE0 723 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 ANKMY2Q8IV38 441 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 SIX5Q8N196 739 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 DBNDD2Q9BQY9 259 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 ZFP64Q9NPA5 681 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 TMOD3Q9NYL9 352 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 USTQ9Y2C2 406 aa7.52□□□□□ -1.2
CHD6-206ENST00000470470 NUP98P52948 1817 aa7.52□□□□□ -1.21
CHD6-206ENST00000470470 CICQ96RK0 1608 aaPredicted RBP7.52□□□□□ -1.21
CHD6-206ENST00000470470 ZNF609O15014 1411 aa7.52□□□□□ -1.21
CHD6-206ENST00000470470 BACH1O14867 736 aa7.52□□□□□ -1.21
CHD6-206ENST00000470470 STARD3NLO95772 234 aa7.52□□□□□ -1.21
CHD6-206ENST00000470470 F13A1P00488 732 aa7.52□□□□□ -1.21
CHD6-206ENST00000470470 HMGB1P09429 215 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms