RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 FOXP2O15409 715 aa12.61□□□□□ -0.39
LDHB-205ENST00000470280 AKR1B1P15121 316 aa12.61□□□□□ -0.39
LDHB-205ENST00000470280 CDK8P49336 464 aa12.61□□□□□ -0.39
LDHB-205ENST00000470280 SEPT2Q15019 361 aa12.61□□□□□ -0.39
LDHB-205ENST00000470280 CCDC129Q6ZRS4 1044 aa12.61□□□□□ -0.39
LDHB-205ENST00000470280 CLEC10AQ8IUN9 316 aa12.61□□□□□ -0.39
LDHB-205ENST00000470280 EVI5LQ96CN4 794 aa12.61□□□□□ -0.39
LDHB-205ENST00000470280 ASCC2Q9H1I8 757 aaPredicted RBP12.61□□□□□ -0.39
LDHB-205ENST00000470280 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
LDHB-205ENST00000470280 A0A1W2PRG0 241 aa12.6□□□□□ -0.39
LDHB-205ENST00000470280 MPHOSPH10O00566 681 aaKnown RBP12.6□□□□□ -0.39
LDHB-205ENST00000470280 PEX10O60683 326 aa12.6□□□□□ -0.39
LDHB-205ENST00000470280 PDE4AP27815 886 aa12.6□□□□□ -0.39
LDHB-205ENST00000470280 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
LDHB-205ENST00000470280 SBK1Q52WX2 424 aa12.6□□□□□ -0.39
LDHB-205ENST00000470280 C16orf86Q6ZW13 317 aa12.6□□□□□ -0.39
LDHB-205ENST00000470280 SIAH1Q8IUQ4 282 aa12.6□□□□□ -0.39
LDHB-205ENST00000470280 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
LDHB-205ENST00000470280 CABP5Q9NP86 173 aa12.6□□□□□ -0.39
LDHB-205ENST00000470280 SWAP70Q9UH65 585 aa12.6□□□□□ -0.39
LDHB-205ENST00000470280 HTTP42858 3142 aa12.6□□□□□ -0.39
LDHB-205ENST00000470280 C19orf81C9J6K1 198 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 PSMC4P43686 418 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 LRRFIP1Q32MZ4 808 aaKnown RBP12.59□□□□□ -0.39
LDHB-205ENST00000470280 GIMAP6Q6P9H5 292 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 USP17L2Q6R6M4 530 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 IFNL3Q8IZI9 196 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 STK11IPQ8N1F8 1099 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 SMCR8Q8TEV9 937 aaPredicted RBP12.59□□□□□ -0.39
LDHB-205ENST00000470280 DDRGK1Q96HY6 314 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 FAM227BQ96M60 508 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 KIAA1683Q9H0B3 1180 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 OSBPL3Q9H4L5 887 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 TMOD4Q9NZQ9 345 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 ARPP21Q9UBL0 812 aaPredicted RBP12.59□□□□□ -0.39
LDHB-205ENST00000470280 PTCH2Q9Y6C5 1203 aa12.59□□□□□ -0.39
LDHB-205ENST00000470280 A0A0D9SFI3 127 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 MINDY4BA8MYZ0 360 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 PATL2C9JE40 543 aaKnown RBP12.58□□□□□ -0.4
LDHB-205ENST00000470280 APPP05067 770 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 GNAT2P19087 354 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 HOXA7P31268 230 aaPredicted RBP12.58□□□□□ -0.4
LDHB-205ENST00000470280 SOX10P56693 466 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 KIF22Q14807 665 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 KIAA1755Q5JYT7 1200 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 VPS53Q5VIR6 699 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 C12orf42Q96LP6 360 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 P2RX7Q99572 595 aaKnown RBP12.58□□□□□ -0.4
LDHB-205ENST00000470280 FEZ1Q99689 392 aa12.58□□□□□ -0.4
LDHB-205ENST00000470280 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.58□□□□□ -0.4
LDHB-205ENST00000470280 ROBO3Q96MS0 1386 aa12.57□□□□□ -0.4
LDHB-205ENST00000470280 TRIM6-TRIM34B2RNG4 842 aa12.57□□□□□ -0.4
LDHB-205ENST00000470280 RASA1P20936 1047 aa12.57□□□□□ -0.4
LDHB-205ENST00000470280 OSBPP22059 807 aa12.57□□□□□ -0.4
LDHB-205ENST00000470280 TDO2P48775 406 aa12.57□□□□□ -0.4
LDHB-205ENST00000470280 NMIQ13287 307 aaPredicted RBP12.57□□□□□ -0.4
LDHB-205ENST00000470280 PABPC4Q13310 644 aaKnown RBP eCLIP12.57□□□□□ -0.4
LDHB-205ENST00000470280 TMEM179Q6ZVK1 233 aa12.57□□□□□ -0.4
LDHB-205ENST00000470280 AMOTL1Q8IY63 956 aa12.57□□□□□ -0.4
LDHB-205ENST00000470280 RILPL2Q969X0 211 aa12.57□□□□□ -0.4
LDHB-205ENST00000470280 PNMA3Q9UL41 463 aa12.57□□□□□ -0.4
LDHB-205ENST00000470280 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
LDHB-205ENST00000470280 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
LDHB-205ENST00000470280 VCAM1P19320 739 aa12.56□□□□□ -0.4
LDHB-205ENST00000470280 HERVK_113P62684 666 aa12.56□□□□□ -0.4
LDHB-205ENST00000470280 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
LDHB-205ENST00000470280 FAM110CQ1W6H9 321 aa12.56□□□□□ -0.4
LDHB-205ENST00000470280 LHX8Q68G74 356 aa12.56□□□□□ -0.4
LDHB-205ENST00000470280 ZNF589Q86UQ0 364 aaPredicted RBP12.56□□□□□ -0.4
LDHB-205ENST00000470280 CCDC17Q96LX7 622 aa12.56□□□□□ -0.4
LDHB-205ENST00000470280 TXNRD2Q9NNW7 524 aa12.56□□□□□ -0.4
LDHB-205ENST00000470280 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
LDHB-205ENST00000470280 SRRDQ9UH36 339 aa12.56□□□□□ -0.4
LDHB-205ENST00000470280 GABRQQ9UN88 632 aa12.56□□□□□ -0.4
LDHB-205ENST00000470280 TACC3Q9Y6A5 838 aa12.56□□□□□ -0.4
LDHB-205ENST00000470280 PRDM1O75626 825 aa12.55□□□□□ -0.4
LDHB-205ENST00000470280 SDSP20132 328 aa12.55□□□□□ -0.4
LDHB-205ENST00000470280 GCLCP48506 637 aaPredicted RBP12.55□□□□□ -0.4
LDHB-205ENST00000470280 FCGRTP55899 365 aa12.55□□□□□ -0.4
LDHB-205ENST00000470280 ICA1Q05084 483 aa12.55□□□□□ -0.4
LDHB-205ENST00000470280 PRKCZQ05513 592 aa12.55□□□□□ -0.4
LDHB-205ENST00000470280 ARHGEF6Q15052 776 aa12.55□□□□□ -0.4
LDHB-205ENST00000470280 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
LDHB-205ENST00000470280 RPAP3Q9H6T3 665 aaPredicted RBP12.55□□□□□ -0.4
LDHB-205ENST00000470280 RBPJLQ9UBG7 517 aa12.55□□□□□ -0.4
LDHB-205ENST00000470280 USP17L15C9J2P7 530 aa12.54□□□□□ -0.4
LDHB-205ENST00000470280 USP17L13C9JLJ4 530 aa12.54□□□□□ -0.4
LDHB-205ENST00000470280 USP17L11C9JVI0 530 aa12.54□□□□□ -0.4
LDHB-205ENST00000470280 USP17L18D6R9N7 530 aa12.54□□□□□ -0.4
LDHB-205ENST00000470280 USP17L22D6RA61 530 aa12.54□□□□□ -0.4
LDHB-205ENST00000470280 USP17L17D6RBQ6 530 aa12.54□□□□□ -0.4
LDHB-205ENST00000470280 USP17L19D6RCP7 530 aa12.54□□□□□ -0.4
LDHB-205ENST00000470280 USP17L20D6RJB6 530 aa12.54□□□□□ -0.4
LDHB-205ENST00000470280 CNMDO75829 334 aa12.54□□□□□ -0.4
LDHB-205ENST00000470280 GNRH1P01148 92 aa12.54□□□□□ -0.4
LDHB-205ENST00000470280 EEF2P13639 858 aaKnown RBP12.54□□□□□ -0.4
LDHB-205ENST00000470280 GSPT1P15170 499 aaKnown RBP12.54□□□□□ -0.4
LDHB-205ENST00000470280 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms