RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 E2F5Q15329 346 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 EZH2Q15910 746 aaKnown RBP10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 ZMYM1Q5SVZ6 1142 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 CCNI2Q6ZMN8 369 aaPredicted RBP10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 MAP3K14Q99558 947 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 DENND2AQ9ULE3 1009 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 CTNND2Q9UQB3 1225 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 MACROD2A1Z1Q3 448 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 MEFVO15553 781 aaPredicted RBP10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 MDM2Q00987 491 aaPredicted RBP10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 IFT88Q13099 833 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 SPATA1Q5VX52 437 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 TRAPPC11Q7Z392 1133 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 NCOA7Q8NI08 942 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 SLC26A6Q9BXS9 759 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 EPN1Q9Y6I3 576 aaPredicted RBP10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 USP31Q70CQ4 1352 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 PTPRUQ92729 1446 aa10.73□□□□□ -0.69
NHLRC3-203ENST00000470258 BTBD18B2RXH4 712 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 RGPD1P0DJD0 1748 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 CD44P16070 742 aaKnown RBP10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 IARSP41252 1262 aaKnown RBP10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 CKAP4Q07065 602 aaKnown RBP10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 NBPF14Q5TI25 921 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 OSBP2Q969R2 916 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 MYO1AQ9UBC5 1043 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 KCNJ14Q9UNX9 436 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 ZMYM6O95789 1325 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 ZNF335Q9H4Z2 1342 aaPredicted RBP10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 RNF113AO15541 343 aaKnown RBP10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 OPA1O60313 960 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 NDUFA10O95299 355 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 CLNS1AP54105 237 aaKnown RBP10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 GUCY1A3Q02108 690 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 PPARAQ07869 468 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 GCKRQ14397 625 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 TSR1Q2NL82 804 aaKnown RBP10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 IQCA1Q86XH1 822 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 HDAC7Q8WUI4 952 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 CTAGE1Q96RT6 745 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 KLC4Q9NSK0 619 aa10.72□□□□□ -0.69
NHLRC3-203ENST00000470258 PLEKHG3A1L390 1219 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 NEURL1BA8MQ27 555 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 HSF2BPO75031 334 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 FGAP02671 866 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 IDEP14735 1019 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 ANTXR2P58335 489 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 CCDC40Q4G0X9 1142 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 MIEF2Q96C03 454 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 CCDC114Q96M63 670 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 FAM184BQ9ULE4 1060 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 MAPK8IP1Q9UQF2 711 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 TBX22Q9Y458 520 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 NALCNQ8IZF0 1738 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 GOLGA8KD6RF30 607 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 PDE2AO00408 941 aaPredicted RBP10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 ZNF213O14771 459 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 RPSAP08865 295 aaKnown RBP10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 PDE6BP35913 854 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 SEC24CP53992 1094 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 SF3B2Q13435 895 aaKnown RBP10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 SAFBQ15424 915 aaKnown RBP eCLIP10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 NAIF1Q69YI7 327 aaPredicted RBP10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 MICALCLQ6ZW33 695 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 APTXQ7Z2E3 356 aaKnown RBP10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 XAGE3Q8WTP9 111 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 COPRSQ9NQ92 184 aa10.71□□□□□ -0.69
NHLRC3-203ENST00000470258 CCDC189A1A4V9 331 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 CDKL5O76039 1030 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 KRT14P02533 472 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 ERCC5P28715 1186 aaPredicted RBP10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 FNTAP49354 379 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 APBA1Q02410 837 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 UBXN1Q04323 297 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 NAA25Q14CX7 972 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 C1orf141Q5JVX7 400 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 COPS6Q7L5N1 327 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 GPIHBP1Q8IV16 184 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 ABTB2Q8N961 1025 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 CCDC51Q96ER9 411 aa10.71□□□□□ -0.7
NHLRC3-203ENST00000470258 ROBO2Q9HCK4 1378 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 IPO7O95373 1038 aaKnown RBP10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 KRT31Q15323 416 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 SENP2Q9HC62 589 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 DMGDHQ9UI17 866 aaKnown RBP10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 PALLDQ8WX93 1383 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 MYH8P13535 1937 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 GOLGA8AA7E2F4 631 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 SKAP2O75563 359 aaPredicted RBP10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 PDHBP11177 359 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 TTMPQ5BVD1 217 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 LMBR1LQ6UX01 489 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 SMARCAL1Q9NZC9 954 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 MCM8Q9UJA3 840 aa10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 REXO2Q9Y3B8 237 aaKnown RBP10.7□□□□□ -0.7
NHLRC3-203ENST00000470258 LAMA4Q16363 1823 aa10.69□□□□□ -0.7
NHLRC3-203ENST00000470258 A0A087WZG4 1122 aa10.69□□□□□ -0.7
NHLRC3-203ENST00000470258 TARSL2A2RTX5 802 aaKnown RBP10.69□□□□□ -0.7
NHLRC3-203ENST00000470258 NNTQ13423 1086 aa10.69□□□□□ -0.7
NHLRC3-203ENST00000470258 SLC39A6Q13433 755 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms