RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 USP17L12C9JPN9 530 aa16.91■□□□□ 0.3
COMMD3-208ENST00000470045 USP17L21D6R901 530 aa16.91■□□□□ 0.3
COMMD3-208ENST00000470045 ANKRD45Q5TZF3 282 aa16.91■□□□□ 0.3
COMMD3-208ENST00000470045 USP17L2Q6R6M4 530 aa16.91■□□□□ 0.3
COMMD3-208ENST00000470045 SMC5Q8IY18 1101 aa16.91■□□□□ 0.3
COMMD3-208ENST00000470045 ANKRD13CQ8N6S4 541 aa16.91■□□□□ 0.3
COMMD3-208ENST00000470045 DYNLL2Q96FJ2 89 aa16.91■□□□□ 0.3
COMMD3-208ENST00000470045 CABP5Q9NP86 173 aa16.91■□□□□ 0.3
COMMD3-208ENST00000470045 MORF4L1Q9UBU8 362 aa16.91■□□□□ 0.3
COMMD3-208ENST00000470045 STAP2Q9UGK3 403 aa16.91■□□□□ 0.3
COMMD3-208ENST00000470045 ROBO3Q96MS0 1386 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 CYP2D7A0A087X1C5 515 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 SMIM22K7EJ46 135 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
COMMD3-208ENST00000470045 IRX3P78415 501 aaPredicted RBP16.9■□□□□ 0.3
COMMD3-208ENST00000470045 PRKCZQ05513 592 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 SEPT2Q15019 361 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 RAB3GAP1Q15042 981 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 GIMAP6Q6P9H5 292 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 CTR9Q6PD62 1173 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 C16orf86Q6ZW13 317 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 NBPF11Q86T75 865 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 ACER1Q8TDN7 264 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 DDRGK1Q96HY6 314 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 ARPP21Q9UBL0 812 aaPredicted RBP16.9■□□□□ 0.3
COMMD3-208ENST00000470045 PARP14Q460N5 1801 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 A0A0G2JMZ2 1700 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 RLFQ13129 1914 aa16.9■□□□□ 0.3
COMMD3-208ENST00000470045 POTEFA5A3E0 1075 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 GSG1L2A8MUP6 293 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 GPAA1O43292 621 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 USP14P54578 494 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 HERVK_113P62684 666 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
COMMD3-208ENST00000470045 SBK1Q52WX2 424 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 TMEM179Q6ZVK1 233 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 AMOTL1Q8IY63 956 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 EXOC6Q8TAG9 804 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 SH3TC2Q8TF17 1288 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 FEZ1Q99689 392 aa16.89■□□□□ 0.29
COMMD3-208ENST00000470045 M0R2C6 588 aa16.88■□□□□ 0.29
COMMD3-208ENST00000470045 CDK8P49336 464 aa16.88■□□□□ 0.29
COMMD3-208ENST00000470045 PDE1AP54750 535 aa16.88■□□□□ 0.29
COMMD3-208ENST00000470045 CCDC17Q96LX7 622 aa16.88■□□□□ 0.29
COMMD3-208ENST00000470045 P2RX7Q99572 595 aaKnown RBP16.88■□□□□ 0.29
COMMD3-208ENST00000470045 EPB41L4AQ9HCS5 686 aaPredicted RBP16.88■□□□□ 0.29
COMMD3-208ENST00000470045 ZBTB47Q9UFB7 747 aaPredicted RBP16.88■□□□□ 0.29
COMMD3-208ENST00000470045 GABRQQ9UN88 632 aa16.88■□□□□ 0.29
COMMD3-208ENST00000470045 A0A1W2PRG0 241 aa16.87■□□□□ 0.29
COMMD3-208ENST00000470045 TNPO2O14787 897 aaKnown RBP16.87■□□□□ 0.29
COMMD3-208ENST00000470045 GNAT2P19087 354 aa16.87■□□□□ 0.29
COMMD3-208ENST00000470045 VCAM1P19320 739 aa16.87■□□□□ 0.29
COMMD3-208ENST00000470045 GRK4P32298 578 aa16.87■□□□□ 0.29
COMMD3-208ENST00000470045 IRF5Q13568 498 aa16.87■□□□□ 0.29
COMMD3-208ENST00000470045 ZYXQ15942 572 aaKnown RBP16.87■□□□□ 0.29
COMMD3-208ENST00000470045 ZMYM1Q5SVZ6 1142 aa16.87■□□□□ 0.29
COMMD3-208ENST00000470045 POTEEQ6S8J3 1075 aa16.87■□□□□ 0.29
COMMD3-208ENST00000470045 RAET1EQ8TD07 263 aa16.87■□□□□ 0.29
COMMD3-208ENST00000470045 GTF3C2Q8WUA4 911 aaPredicted RBP16.87■□□□□ 0.29
COMMD3-208ENST00000470045 FSD1Q9BTV5 496 aa16.87■□□□□ 0.29
COMMD3-208ENST00000470045 RWDD1Q9H446 243 aaPredicted RBP16.87■□□□□ 0.29
COMMD3-208ENST00000470045 BRCA2P51587 3418 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 USP17L15C9J2P7 530 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 USP17L13C9JLJ4 530 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 USP17L11C9JVI0 530 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 USP17L18D6R9N7 530 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 USP17L22D6RA61 530 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 USP17L17D6RBQ6 530 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 USP17L19D6RCP7 530 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 USP17L20D6RJB6 530 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 MPHOSPH10O00566 681 aaKnown RBP16.86■□□□□ 0.29
COMMD3-208ENST00000470045 AKR1B1P15121 316 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 FLT3LGP49771 235 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 USP17L24Q0WX57 530 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 TXNRD2Q9NNW7 524 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 RBPJLQ9UBG7 517 aa16.86■□□□□ 0.29
COMMD3-208ENST00000470045 SUPT16HQ9Y5B9 1047 aaKnown RBP16.86■□□□□ 0.29
COMMD3-208ENST00000470045 IGHDP01880 384 aa16.85■□□□□ 0.29
COMMD3-208ENST00000470045 LBX2Q6XYB7 198 aa16.85■□□□□ 0.29
COMMD3-208ENST00000470045 CATSPERGQ6ZRH7 1159 aa16.85■□□□□ 0.29
COMMD3-208ENST00000470045 SIAH1Q8IUQ4 282 aa16.85■□□□□ 0.29
COMMD3-208ENST00000470045 SLAIN1Q8ND83 568 aa16.85■□□□□ 0.29
COMMD3-208ENST00000470045 PXYLP1Q8TE99 480 aa16.85■□□□□ 0.29
COMMD3-208ENST00000470045 COA7Q96BR5 231 aa16.85■□□□□ 0.29
COMMD3-208ENST00000470045 SEC62Q99442 399 aaKnown RBP16.85■□□□□ 0.29
COMMD3-208ENST00000470045 ICA1Q05084 483 aa16.84■□□□□ 0.29
COMMD3-208ENST00000470045 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
COMMD3-208ENST00000470045 GPRC5AQ8NFJ5 357 aa16.84■□□□□ 0.29
COMMD3-208ENST00000470045 EVI5LQ96CN4 794 aa16.84■□□□□ 0.29
COMMD3-208ENST00000470045 TMEM106CQ9BVX2 250 aa16.84■□□□□ 0.29
COMMD3-208ENST00000470045 LNPKQ9C0E8 428 aa16.84■□□□□ 0.29
COMMD3-208ENST00000470045 TMX2Q9Y320 296 aa16.84■□□□□ 0.29
COMMD3-208ENST00000470045 PATL2C9JE40 543 aaKnown RBP16.83■□□□□ 0.28
COMMD3-208ENST00000470045 ADCY3O60266 1144 aa16.83■□□□□ 0.28
COMMD3-208ENST00000470045 PEX10O60683 326 aa16.83■□□□□ 0.28
COMMD3-208ENST00000470045 RASA1P20936 1047 aa16.83■□□□□ 0.28
COMMD3-208ENST00000470045 ERVK-9P63128 1117 aa16.83■□□□□ 0.28
COMMD3-208ENST00000470045 ERVK-24P63145 666 aa16.83■□□□□ 0.28
COMMD3-208ENST00000470045 NUCB1Q02818 461 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms