RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 UBE4AQ14139 1066 aa15.58■□□□□ 0.08
BRCA1-209ENST00000470026 PTPN21Q16825 1174 aa15.58■□□□□ 0.08
BRCA1-209ENST00000470026 TRMT44Q8IYL2 757 aaKnown RBP15.58■□□□□ 0.08
BRCA1-209ENST00000470026 SAMSN1Q9NSI8 373 aaKnown RBP15.58■□□□□ 0.08
BRCA1-209ENST00000470026 FAM205CA6NFA0 338 aa15.57■□□□□ 0.08
BRCA1-209ENST00000470026 SEMA3EO15041 775 aa15.57■□□□□ 0.08
BRCA1-209ENST00000470026 CLCN6P51797 869 aa15.57■□□□□ 0.08
BRCA1-209ENST00000470026 SPATA1Q5VX52 437 aa15.57■□□□□ 0.08
BRCA1-209ENST00000470026 CCDC34Q96HJ3 373 aa15.57■□□□□ 0.08
BRCA1-209ENST00000470026 CDCA7Q9BWT1 371 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-209ENST00000470026 VPS54Q9P1Q0 977 aa15.57■□□□□ 0.08
BRCA1-209ENST00000470026 NIP7Q9Y221 180 aaKnown RBP eCLIP15.57■□□□□ 0.08
BRCA1-209ENST00000470026 LOC102724428A0A0B4J2F2 783 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 MINDY4BA8MYZ0 360 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 SMIM22K7EJ46 135 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 DDAH1O94760 285 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 ZRANB2O95218 330 aaKnown RBP eCLIP15.56■□□□□ 0.08
BRCA1-209ENST00000470026 CALM1P0DP23 149 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 CALM2P0DP24 149 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 CALM3P0DP25 149 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 CDK11BP21127 795 aaKnown RBP15.56■□□□□ 0.08
BRCA1-209ENST00000470026 SIK1P57059 783 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 MAP3K9P80192 1104 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 AKAP17AQ02040 695 aaKnown RBP15.56■□□□□ 0.08
BRCA1-209ENST00000470026 BMS1Q14692 1282 aaKnown RBP15.56■□□□□ 0.08
BRCA1-209ENST00000470026 ARHGAP29Q52LW3 1261 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 CDKAL1Q5VV42 579 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 PDILTQ8N807 584 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 PAGE5Q96GU1 130 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 GSDMAQ96QA5 445 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 PANX2Q96RD6 677 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 FHOD1Q9Y613 1164 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 BAZ2AQ9UIF9 1905 aaKnown RBP15.56■□□□□ 0.08
BRCA1-209ENST00000470026 ATP6V1AP38606 617 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 FAM193AP78312 1265 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 DPYDQ12882 1025 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 ITPK1Q13572 414 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 SF3B3Q15393 1217 aaKnown RBP15.56■□□□□ 0.08
BRCA1-209ENST00000470026 ZNF384Q8TF68 577 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 KIFC2Q96AC6 838 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 EPSTI1Q96J88 318 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 GNL3LQ9NVN8 582 aaKnown RBP15.56■□□□□ 0.08
BRCA1-209ENST00000470026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.56■□□□□ 0.08
BRCA1-209ENST00000470026 ROBO1Q9Y6N7 1651 aa15.56■□□□□ 0.08
BRCA1-209ENST00000470026 URI1O94763 535 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-209ENST00000470026 TPM1P09493 284 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 CD44P16070 742 aaKnown RBP15.55■□□□□ 0.08
BRCA1-209ENST00000470026 TERF2Q15554 542 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 TOGARAM2Q6ZUX3 1019 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 TMTC3Q6ZXV5 915 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 CATIPQ7Z7H3 387 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 UBXN4Q92575 508 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 DHX58Q96C10 678 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 ZHX1Q9UKY1 873 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-209ENST00000470026 CASZ1Q86V15 1759 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 COL5A3P25940 1745 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-209ENST00000470026 WNT7AO00755 349 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 PLEKHA8P1O95397 391 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 FECHP22830 423 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 ADKP55263 362 aaKnown RBP15.55■□□□□ 0.08
BRCA1-209ENST00000470026 ATP2C1P98194 919 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-209ENST00000470026 HSP90AA4PQ58FG1 418 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 IFIT1BQ5T764 474 aaKnown RBP15.55■□□□□ 0.08
BRCA1-209ENST00000470026 SYMPKQ92797 1274 aaKnown RBP15.55■□□□□ 0.08
BRCA1-209ENST00000470026 WDR24Q96S15 920 aa15.55■□□□□ 0.08
BRCA1-209ENST00000470026 BSDC1Q9NW68 430 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-209ENST00000470026 ADD3Q9UEY8 706 aaKnown RBP15.55■□□□□ 0.08
BRCA1-209ENST00000470026 PDS5AQ29RF7 1337 aaKnown RBP15.54■□□□□ 0.08
BRCA1-209ENST00000470026 CNTNAP5Q8WYK1 1306 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 ZNF831Q5JPB2 1677 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 LAMB1P07942 1786 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 PPP1R3GB7ZBB8 358 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 ORC4O43929 436 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 ATP2B1P20020 1258 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 GYG1P46976 350 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 CLEC4GQ6UXB4 293 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 IQCA1Q86XH1 822 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 CARD6Q9BX69 1037 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 NAA15Q9BXJ9 866 aaKnown RBP15.54■□□□□ 0.08
BRCA1-209ENST00000470026 ABCF2Q9UG63 623 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 MRFAP1Q9Y605 127 aa15.54■□□□□ 0.08
BRCA1-209ENST00000470026 V9GY48 417 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-209ENST00000470026 AKR1B15C9JRZ8 316 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-209ENST00000470026 NPHP1O15259 732 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 CTR9Q6PD62 1173 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 TMED8Q6PL24 325 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-209ENST00000470026 CREBRFQ8IUR6 639 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 MNS1Q8NEH6 495 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 SYNRGQ9UMZ2 1314 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 NRAPQ86VF7 1730 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 ZBTB22O15209 634 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 TEX33O43247 280 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 ATP8B1O43520 1251 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 PRDM1O75626 825 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 CASQ1P31415 396 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 TRAPPC10P48553 1259 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 DYNLL1P63167 89 aaKnown RBP15.53■□□□□ 0.08
BRCA1-209ENST00000470026 E2F4Q16254 413 aa15.53■□□□□ 0.08
BRCA1-209ENST00000470026 RSRC2Q7L4I2 434 aaKnown RBP15.53■□□□□ 0.08
BRCA1-209ENST00000470026 ANKRD18AQ8IVF6 992 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms