RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 SLC4A4Q9Y6R1 1079 aa10.93□□□□□ -0.66
FN1-216ENST00000469569 THSD7BQ9C0I4 1608 aa10.93□□□□□ -0.66
FN1-216ENST00000469569 PATL2C9JE40 543 aaKnown RBP10.92□□□□□ -0.66
FN1-216ENST00000469569 INPP5BP32019 993 aa10.92□□□□□ -0.66
FN1-216ENST00000469569 CAP2P40123 477 aa10.92□□□□□ -0.66
FN1-216ENST00000469569 ZMYM1Q5SVZ6 1142 aa10.92□□□□□ -0.66
FN1-216ENST00000469569 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
FN1-216ENST00000469569 LCORLQ8N3X6 602 aa10.92□□□□□ -0.66
FN1-216ENST00000469569 PUS7LQ9H0K6 701 aaKnown RBP10.92□□□□□ -0.66
FN1-216ENST00000469569 CABP5Q9NP86 173 aa10.92□□□□□ -0.66
FN1-216ENST00000469569 ARPP21Q9UBL0 812 aaPredicted RBP10.92□□□□□ -0.66
FN1-216ENST00000469569 SAP30BPQ9UHR5 308 aaKnown RBP10.92□□□□□ -0.66
FN1-216ENST00000469569 FZD1Q9UP38 647 aa10.92□□□□□ -0.66
FN1-216ENST00000469569 KCNH4Q9UQ05 1017 aa10.92□□□□□ -0.66
FN1-216ENST00000469569 USP17L5A8MUK1 530 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 GPAA1O43292 621 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 SLC3A2P08195 630 aaKnown RBP10.91□□□□□ -0.66
FN1-216ENST00000469569 PTPRAP18433 802 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 SBK1Q52WX2 424 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 TATDN1Q6P1N9 297 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 OSBP2Q969R2 916 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 ZDHHC16Q969W1 377 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 RILPL2Q969X0 211 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 CCDC136Q96JN2 1154 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 CCDC17Q96LX7 622 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 RNF186Q9NXI6 227 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 ZHX2Q9Y6X8 837 aa10.91□□□□□ -0.66
FN1-216ENST00000469569 MYO5AQ9Y4I1 1855 aaKnown RBP10.91□□□□□ -0.66
FN1-216ENST00000469569 MYH7P12883 1935 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 CCL15-CCL14A0A0B4J2E2 113 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 FAM205CA6NFA0 338 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 IRF6O14896 467 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 FOXN1O15353 648 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 TRPA1O75762 1119 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 APPP05067 770 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 PABPC4Q13310 644 aaKnown RBP eCLIP10.9□□□□□ -0.66
FN1-216ENST00000469569 ARHGEF6Q15052 776 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 CCL15Q16663 113 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 CERKLQ49MI3 558 aaPredicted RBP10.9□□□□□ -0.66
FN1-216ENST00000469569 MCMDC2Q4G0Z9 681 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 PPP4R3BQ5MIZ7 849 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 VARS2Q5ST30 1063 aaKnown RBP10.9□□□□□ -0.66
FN1-216ENST00000469569 C12orf60Q5U649 245 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 ZNF280CQ8ND82 737 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 SDR42E1Q8WUS8 393 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 WDR18Q9BV38 432 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 DIAPH3Q9NSV4 1193 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 SLC45A1Q9Y2W3 748 aa10.9□□□□□ -0.66
FN1-216ENST00000469569 C19orf81C9J6K1 198 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 USP17L12C9JPN9 530 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 USP17L21D6R901 530 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 HSPA8P11142 646 aaKnown RBP10.89□□□□□ -0.67
FN1-216ENST00000469569 GJA5P36382 358 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 TDO2P48775 406 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 NT5C2P49902 561 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 GABPAQ06546 454 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 ANKRD23Q86SG2 305 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 RUFY2Q8WXA3 655 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 ZIC5Q96T25 663 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 ZFYVE28Q9HCC9 887 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 AFG3L2Q9Y4W6 797 aa10.89□□□□□ -0.67
FN1-216ENST00000469569 FOCADQ5VW36 1801 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 A0A0G2JLL6 359 aaPredicted RBP10.88□□□□□ -0.67
FN1-216ENST00000469569 GSG1L2A8MUP6 293 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 MAP3K7O43318 606 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 SDSP20132 328 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 PLCD1P51178 756 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 USP14P54578 494 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 ALX1Q15699 326 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 ABCB5Q2M3G0 1257 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 TTC22Q5TAA0 569 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 CTR9Q6PD62 1173 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 PRRT2Q7Z6L0 340 aaPredicted RBP10.88□□□□□ -0.67
FN1-216ENST00000469569 PROCA1Q8NCQ7 364 aaPredicted RBP10.88□□□□□ -0.67
FN1-216ENST00000469569 BRI3BPQ8WY22 251 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 ADAM33Q9BZ11 813 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 NAPBQ9H115 298 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 SH2D4AQ9H788 454 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 MYH1P12882 1939 aa10.88□□□□□ -0.67
FN1-216ENST00000469569 USP17L10C9JJH3 530 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 PRKAB2O43741 272 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 LBX1P52954 281 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 PDE4BQ07343 736 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 C16orf86Q6ZW13 317 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 IFNL3Q8IZI9 196 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 MKNK2Q9HBH9 465 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 TMOD4Q9NZQ9 345 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 PNMA3Q9UL41 463 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 ZBTB21Q9ULJ3 1066 aa10.87□□□□□ -0.67
FN1-216ENST00000469569 ZMYM6O95789 1325 aa10.86□□□□□ -0.67
FN1-216ENST00000469569 FAM196BA6NMK8 535 aa10.86□□□□□ -0.67
FN1-216ENST00000469569 M0R2C6 588 aa10.86□□□□□ -0.67
FN1-216ENST00000469569 GH2P01242 217 aa10.86□□□□□ -0.67
FN1-216ENST00000469569 PCP11498 1178 aaKnown RBP10.86□□□□□ -0.67
FN1-216ENST00000469569 SHMT1P34896 483 aa10.86□□□□□ -0.67
FN1-216ENST00000469569 CDK8P49336 464 aa10.86□□□□□ -0.67
FN1-216ENST00000469569 BACE1P56817 501 aa10.86□□□□□ -0.67
FN1-216ENST00000469569 SPP2Q13103 211 aa10.86□□□□□ -0.67
FN1-216ENST00000469569 TAF1CQ15572 869 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms