RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 SNAPC2Q13487 334 aa27.05■■□□□ 1.92
SREBF1-208ENST00000469356 CYP4F22Q6NT55 531 aa27.05■■□□□ 1.92
SREBF1-208ENST00000469356 NEK1Q96PY6 1258 aa27.05■■□□□ 1.92
SREBF1-208ENST00000469356 UBAC1Q9BSL1 405 aa27.05■■□□□ 1.92
SREBF1-208ENST00000469356 AFG3L2Q9Y4W6 797 aa27.05■■□□□ 1.92
SREBF1-208ENST00000469356 TACC3Q9Y6A5 838 aa27.05■■□□□ 1.92
SREBF1-208ENST00000469356 MANSC4A6NHS7 340 aaPredicted RBP27.04■■□□□ 1.92
SREBF1-208ENST00000469356 USP17L10C9JJH3 530 aa27.04■■□□□ 1.92
SREBF1-208ENST00000469356 TTLL1O95922 423 aa27.04■■□□□ 1.92
SREBF1-208ENST00000469356 USP14P54578 494 aa27.04■■□□□ 1.92
SREBF1-208ENST00000469356 INHBEP58166 350 aa27.04■■□□□ 1.92
SREBF1-208ENST00000469356 ANAPC15P60006 121 aa27.04■■□□□ 1.92
SREBF1-208ENST00000469356 JAG1P78504 1218 aa27.04■■□□□ 1.92
SREBF1-208ENST00000469356 SPP2Q13103 211 aa27.04■■□□□ 1.92
SREBF1-208ENST00000469356 TTC14Q96N46 770 aa27.04■■□□□ 1.92
SREBF1-208ENST00000469356 FEZ1Q99689 392 aa27.04■■□□□ 1.92
SREBF1-208ENST00000469356 NYAP2Q9P242 653 aa27.04■■□□□ 1.92
SREBF1-208ENST00000469356 IRF6O14896 467 aa27.03■■□□□ 1.92
SREBF1-208ENST00000469356 SEC24BO95487 1268 aa27.03■■□□□ 1.92
SREBF1-208ENST00000469356 GUCY1A2P33402 732 aa27.03■■□□□ 1.92
SREBF1-208ENST00000469356 MCM5P33992 734 aa27.03■■□□□ 1.92
SREBF1-208ENST00000469356 ATP2B2Q01814 1243 aa27.03■■□□□ 1.92
SREBF1-208ENST00000469356 MTA3Q9BTC8 594 aa27.03■■□□□ 1.92
SREBF1-208ENST00000469356 MTMR4Q9NYA4 1195 aa27.03■■□□□ 1.92
SREBF1-208ENST00000469356 ZSWIM5Q9P217 1185 aa27.03■■□□□ 1.92
SREBF1-208ENST00000469356 KCNH4Q9UQ05 1017 aa27.03■■□□□ 1.92
SREBF1-208ENST00000469356 SNX14Q9Y5W7 946 aa27.03■■□□□ 1.92
SREBF1-208ENST00000469356 IGKV6D-41A0A0C4DH26 115 aa27.02■■□□□ 1.92
SREBF1-208ENST00000469356 CETPP11597 493 aa27.02■■□□□ 1.92
SREBF1-208ENST00000469356 SREBF2Q12772 1141 aa27.02■■□□□ 1.92
SREBF1-208ENST00000469356 CEP95Q96GE4 821 aa27.02■■□□□ 1.92
SREBF1-208ENST00000469356 BACH2Q9BYV9 841 aa27.02■■□□□ 1.92
SREBF1-208ENST00000469356 TMOD4Q9NZQ9 345 aa27.02■■□□□ 1.92
SREBF1-208ENST00000469356 SYNPO2Q9UMS6 1093 aa27.02■■□□□ 1.92
SREBF1-208ENST00000469356 WDR33Q9C0J8 1336 aaKnown RBP27.02■■□□□ 1.92
SREBF1-208ENST00000469356 GREB1LQ9C091 1923 aaPredicted RBP27.02■■□□□ 1.92
SREBF1-208ENST00000469356 PHIPQ8WWQ0 1821 aa27.01■■□□□ 1.91
SREBF1-208ENST00000469356 TRIM75PA6NK02 468 aa27.01■■□□□ 1.91
SREBF1-208ENST00000469356 MAP2K2P36507 400 aa27.01■■□□□ 1.91
SREBF1-208ENST00000469356 BACE1P56817 501 aa27.01■■□□□ 1.91
SREBF1-208ENST00000469356 HTRA3P83110 453 aa27.01■■□□□ 1.91
SREBF1-208ENST00000469356 STOX1Q6ZVD7 989 aa27.01■■□□□ 1.91
SREBF1-208ENST00000469356 FASTKD5Q7L8L6 764 aaKnown RBP27.01■■□□□ 1.91
SREBF1-208ENST00000469356 RASEFQ8IZ41 740 aa27.01■■□□□ 1.91
SREBF1-208ENST00000469356 CNKSR2Q8WXI2 1034 aa27.01■■□□□ 1.91
SREBF1-208ENST00000469356 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.01■■□□□ 1.91
SREBF1-208ENST00000469356 STX8Q9UNK0 236 aa27.01■■□□□ 1.91
SREBF1-208ENST00000469356 FAM155AB1AL88 458 aaPredicted RBP27■■□□□ 1.91
SREBF1-208ENST00000469356 EEF2P13639 858 aaKnown RBP27■■□□□ 1.91
SREBF1-208ENST00000469356 SHROOM1Q2M3G4 852 aaPredicted RBP27■■□□□ 1.91
SREBF1-208ENST00000469356 USP17L2Q6R6M4 530 aa27■■□□□ 1.91
SREBF1-208ENST00000469356 CCDC84Q86UT8 332 aaPredicted RBP27■■□□□ 1.91
SREBF1-208ENST00000469356 DGKHQ86XP1 1220 aa27■■□□□ 1.91
SREBF1-208ENST00000469356 ZSCAN10Q96SZ4 725 aaPredicted RBP27■■□□□ 1.91
SREBF1-208ENST00000469356 KIAA1683Q9H0B3 1180 aa27■■□□□ 1.91
SREBF1-208ENST00000469356 CLIP2Q9UDT6 1046 aa27■■□□□ 1.91
SREBF1-208ENST00000469356 MKRN3Q13064 507 aaKnown RBP26.99■■□□□ 1.91
SREBF1-208ENST00000469356 OTUD7BQ6GQQ9 843 aa26.99■■□□□ 1.91
SREBF1-208ENST00000469356 BLOC1S2Q6QNY1 142 aa26.99■■□□□ 1.91
SREBF1-208ENST00000469356 MB21D2Q8IYB1 491 aaPredicted RBP26.99■■□□□ 1.91
SREBF1-208ENST00000469356 MKL1Q969V6 931 aa26.99■■□□□ 1.91
SREBF1-208ENST00000469356 TMEM87BQ96K49 555 aa26.99■■□□□ 1.91
SREBF1-208ENST00000469356 JAKMIP1Q96N16 626 aaKnown RBP26.99■■□□□ 1.91
SREBF1-208ENST00000469356 GOPCQ9HD26 462 aa26.99■■□□□ 1.91
SREBF1-208ENST00000469356 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.99■■□□□ 1.91
SREBF1-208ENST00000469356 TMX2Q9Y320 296 aa26.99■■□□□ 1.91
SREBF1-208ENST00000469356 TAF6LQ9Y6J9 622 aa26.99■■□□□ 1.91
SREBF1-208ENST00000469356 MYH4Q9Y623 1939 aa26.99■■□□□ 1.91
SREBF1-208ENST00000469356 WDR19Q8NEZ3 1342 aa26.98■■□□□ 1.91
SREBF1-208ENST00000469356 IFIT3O14879 490 aaKnown RBP26.98■■□□□ 1.91
SREBF1-208ENST00000469356 GJA5P36382 358 aa26.98■■□□□ 1.91
SREBF1-208ENST00000469356 VEGFBP49765 207 aa26.98■■□□□ 1.91
SREBF1-208ENST00000469356 SH3D19Q5HYK7 790 aa26.98■■□□□ 1.91
SREBF1-208ENST00000469356 DHX32Q7L7V1 743 aaKnown RBP26.98■■□□□ 1.91
SREBF1-208ENST00000469356 C22orf23Q9BZE7 217 aa26.98■■□□□ 1.91
SREBF1-208ENST00000469356 TM6SF1Q9BZW5 370 aa26.98■■□□□ 1.91
SREBF1-208ENST00000469356 A0A0G2JLL6 359 aaPredicted RBP26.97■■□□□ 1.91
SREBF1-208ENST00000469356 TOP1P11387 765 aaKnown RBP26.97■■□□□ 1.91
SREBF1-208ENST00000469356 MTMR2Q13614 643 aa26.97■■□□□ 1.91
SREBF1-208ENST00000469356 PRRT2Q7Z6L0 340 aaPredicted RBP26.97■■□□□ 1.91
SREBF1-208ENST00000469356 TMTC2Q8N394 836 aa26.97■■□□□ 1.91
SREBF1-208ENST00000469356 IL17RBQ9NRM6 502 aa26.97■■□□□ 1.91
SREBF1-208ENST00000469356 CCL15-CCL14A0A0B4J2E2 113 aa26.96■■□□□ 1.91
SREBF1-208ENST00000469356 PRC1O43663 620 aa26.96■■□□□ 1.91
SREBF1-208ENST00000469356 KIF23Q02241 960 aaPredicted RBP26.96■■□□□ 1.91
SREBF1-208ENST00000469356 PABPC4Q13310 644 aaKnown RBP eCLIP26.96■■□□□ 1.91
SREBF1-208ENST00000469356 CCL15Q16663 113 aa26.96■■□□□ 1.91
SREBF1-208ENST00000469356 CYB5R4Q7L1T6 521 aa26.96■■□□□ 1.91
SREBF1-208ENST00000469356 PROCA1Q8NCQ7 364 aaPredicted RBP26.96■■□□□ 1.91
SREBF1-208ENST00000469356 ACER1Q8TDN7 264 aa26.96■■□□□ 1.91
SREBF1-208ENST00000469356 ZKSCAN3Q9BRR0 538 aa26.96■■□□□ 1.91
SREBF1-208ENST00000469356 TNKSO95271 1327 aa26.95■■□□□ 1.91
SREBF1-208ENST00000469356 NOVP48745 357 aa26.95■■□□□ 1.91
SREBF1-208ENST00000469356 WTAPQ15007 396 aa26.95■■□□□ 1.91
SREBF1-208ENST00000469356 ADCK5Q3MIX3 580 aa26.95■■□□□ 1.91
SREBF1-208ENST00000469356 IFIT1BQ5T764 474 aaKnown RBP26.95■■□□□ 1.91
SREBF1-208ENST00000469356 GADL1Q6ZQY3 521 aa26.95■■□□□ 1.91
SREBF1-208ENST00000469356 LPAR1Q92633 364 aa26.95■■□□□ 1.91
SREBF1-208ENST00000469356 TESPA1A2RU30 521 aaPredicted RBP26.94■■□□□ 1.9
SREBF1-208ENST00000469356 NMT2O60551 498 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms