RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 PICALMQ13492 652 aa9.62□□□□□ -0.87
NPHP3-204ENST00000469232 RASA3Q14644 834 aa9.62□□□□□ -0.87
NPHP3-204ENST00000469232 RCSD1Q6JBY9 416 aa9.62□□□□□ -0.87
NPHP3-204ENST00000469232 RALYLQ86SE5 291 aaKnown RBP9.62□□□□□ -0.87
NPHP3-204ENST00000469232 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
NPHP3-204ENST00000469232 CCDC17Q96LX7 622 aa9.62□□□□□ -0.87
NPHP3-204ENST00000469232 TAF1DQ9H5J8 278 aaPredicted RBP9.62□□□□□ -0.87
NPHP3-204ENST00000469232 ASTN2O75129 1339 aaPredicted RBP9.62□□□□□ -0.87
NPHP3-204ENST00000469232 K7ELQ4 463 aaPredicted RBP9.61□□□□□ -0.87
NPHP3-204ENST00000469232 KDM4AO75164 1064 aa9.61□□□□□ -0.87
NPHP3-204ENST00000469232 LMOD1P29536 600 aaPredicted RBP9.61□□□□□ -0.87
NPHP3-204ENST00000469232 CCDC178Q5BJE1 867 aa9.61□□□□□ -0.87
NPHP3-204ENST00000469232 SLC44A5Q8NCS7 719 aa9.61□□□□□ -0.87
NPHP3-204ENST00000469232 ZNF274Q96GC6 653 aaPredicted RBP9.61□□□□□ -0.87
NPHP3-204ENST00000469232 ZSCAN31Q96LW9 406 aaPredicted RBP9.61□□□□□ -0.87
NPHP3-204ENST00000469232 IPO9Q96P70 1041 aaKnown RBP9.61□□□□□ -0.87
NPHP3-204ENST00000469232 LY9Q9HBG7 655 aa9.61□□□□□ -0.87
NPHP3-204ENST00000469232 IL17RBQ9NRM6 502 aa9.61□□□□□ -0.87
NPHP3-204ENST00000469232 ANGEL1Q9UNK9 670 aaKnown RBP9.61□□□□□ -0.87
NPHP3-204ENST00000469232 LIMCH1Q9UPQ0 1083 aa9.61□□□□□ -0.87
NPHP3-204ENST00000469232 FAM205CA6NFA0 338 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 TCP10L2B9ZVM9 353 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 EPHX2P34913 555 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 TCP10Q12799 353 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 BECN1Q14457 450 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 Q6ZUG5 572 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 DGKHQ86XP1 1220 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 TMTC2Q8N394 836 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 TMX3Q96JJ7 454 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 TMEM39BQ9GZU3 492 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 DEFB129Q9H1M3 183 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 SH2B1Q9NRF2 756 aaPredicted RBP9.6□□□□□ -0.87
NPHP3-204ENST00000469232 GINM1Q9NU53 330 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 ZNF112Q9UJU3 913 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 TPCN1Q9ULQ1 816 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 PAPPA2Q9BXP8 1791 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 SSC5DA1L4H1 1573 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 POTEB3A0JP26 581 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 PHF20L1A8MW92 1017 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 ST3GAL1Q11201 340 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 RBM26Q5T8P6 1007 aaKnown RBP9.6□□□□□ -0.87
NPHP3-204ENST00000469232 ANGEL2Q5VTE6 544 aaKnown RBP9.6□□□□□ -0.87
NPHP3-204ENST00000469232 GPR153Q6NV75 609 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 POTEBQ6S5H4 581 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 PNMA8AQ86V59 439 aaPredicted RBP9.6□□□□□ -0.87
NPHP3-204ENST00000469232 ENAHQ8N8S7 591 aaPredicted RBP9.6□□□□□ -0.87
NPHP3-204ENST00000469232 INTS4Q96HW7 963 aaKnown RBP9.6□□□□□ -0.87
NPHP3-204ENST00000469232 CSRNP1Q96S65 589 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 ZSCAN10Q96SZ4 725 aaPredicted RBP9.6□□□□□ -0.87
NPHP3-204ENST00000469232 MAP3K14Q99558 947 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 VEZTQ9HBM0 779 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 GGA3Q9NZ52 723 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 SYNPO2Q9UMS6 1093 aa9.6□□□□□ -0.87
NPHP3-204ENST00000469232 PFKFB2O60825 505 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 PRDM1O75626 825 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 DDIT3P35638 169 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 TFAP4Q01664 338 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 RRP1BQ14684 758 aaKnown RBP9.59□□□□□ -0.87
NPHP3-204ENST00000469232 ME3Q16798 604 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 IQCA1Q86XH1 822 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 HSCBQ8IWL3 235 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 MKL1Q969V6 931 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 TCEANC2Q96MN5 208 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 HS3ST6Q96QI5 342 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 MKNK2Q9HBH9 465 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 GPHNQ9NQX3 736 aaPredicted RBP9.59□□□□□ -0.87
NPHP3-204ENST00000469232 BRPF3Q9ULD4 1205 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 HPS5Q9UPZ3 1129 aa9.59□□□□□ -0.87
NPHP3-204ENST00000469232 MYH8P13535 1937 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 TNKSO95271 1327 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 RANBP6O60518 1105 aaKnown RBP9.58□□□□□ -0.88
NPHP3-204ENST00000469232 LARGE1O95461 756 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 PDIA3P30101 505 aaKnown RBP9.58□□□□□ -0.88
NPHP3-204ENST00000469232 GUCY1A2P33402 732 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 SART3Q15020 963 aaKnown RBP9.58□□□□□ -0.88
NPHP3-204ENST00000469232 PPP2R5BQ15173 497 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 TMEM67Q5HYA8 995 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 APOA5Q6Q788 366 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 ZNF444Q8N0Y2 327 aaPredicted RBP9.58□□□□□ -0.88
NPHP3-204ENST00000469232 BRF1Q92994 677 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 HOOK2Q96ED9 719 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 SENP2Q9HC62 589 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 PLSCR2Q9NRY7 297 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 MTMR4Q9NYA4 1195 aa9.58□□□□□ -0.88
NPHP3-204ENST00000469232 POLR2AP24928 1970 aaKnown RBP9.57□□□□□ -0.88
NPHP3-204ENST00000469232 TSPY2A6NKD2 308 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 IFIT3O14879 490 aaKnown RBP9.57□□□□□ -0.88
NPHP3-204ENST00000469232 SLURP2P0DP57 97 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 AKR1B1P15121 316 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 VEGFAP15692 232 aaPredicted RBP9.57□□□□□ -0.88
NPHP3-204ENST00000469232 JAG1P78504 1218 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 TROAPQ12815 778 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 FAM47AQ5JRC9 791 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 RRP12Q5JTH9 1297 aaKnown RBP9.57□□□□□ -0.88
NPHP3-204ENST00000469232 PPP4R3BQ5MIZ7 849 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 NBPF12Q5TAG4 269 aaPredicted RBP9.57□□□□□ -0.88
NPHP3-204ENST00000469232 CHST3Q7LGC8 479 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 SIAH1Q8IUQ4 282 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 GTF3C6Q969F1 213 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 UBAC1Q9BSL1 405 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms