RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 THUMPD2Q9BTF0 503 aaKnown RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 TRIM5Q9C035 493 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 SUDS3Q9H7L9 328 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 VEZTQ9HBM0 779 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 AVENQ9NQS1 362 aaPredicted RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.59□□□□□ -1.512e-11■■■■■ 55.9
SF3B1-207ENST00000468925 SPATS2LQ9NUQ6 558 aaKnown RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 TFIP11Q9UBB9 837 aaKnown RBP5.59□□□□□ -1.51
SF3B1-207ENST00000468925 SH3BP1Q9Y3L3 701 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 LRRIQ1Q96JM4 1722 aa5.59□□□□□ -1.51
SF3B1-207ENST00000468925 CROCC2H7BZ55 1655 aa5.59□□□□□ -1.52
SF3B1-207ENST00000468925 IQSEC2Q5JU85 1478 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 RGS12O14924 1447 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 FAM135BQ49AJ0 1406 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 AATKQ6ZMQ8 1374 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 PIK3R4Q99570 1358 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 FAM177BA6PVY3 158 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 POLR3GO15318 223 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-207ENST00000468925 ZSCAN12O43309 604 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 RLBP1P12271 317 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 PDCP20941 246 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 PTGS1P23219 599 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 ARHGAP25P42331 645 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 LMAN1P49257 510 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 MRPL12P52815 198 aaKnown RBP5.58□□□□□ -1.52
SF3B1-207ENST00000468925 SLC8A3P57103 927 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 TYRO3Q06418 890 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 ADCY2Q08462 1091 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 LAMC2Q13753 1193 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 PLCB4Q15147 1175 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 ZNF662Q6ZS27 426 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 MICALCLQ6ZW33 695 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 NPAS4Q8IUM7 802 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 ITPRIPQ8IWB1 547 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 CEP112Q8N8E3 955 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 NEK11Q8NG66 645 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 C7orf43Q8WVR3 580 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 RTF1Q92541 710 aaKnown RBP5.58□□□□□ -1.52
SF3B1-207ENST00000468925 SMARCE1Q969G3 411 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 SGSM3Q96HU1 749 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 TMX3Q96JJ7 454 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 CABS1Q96KC9 395 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 TRIM6Q9C030 488 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-207ENST00000468925 NAT10Q9H0A0 1025 aaKnown RBP5.58□□□□□ -1.52
SF3B1-207ENST00000468925 VIPAS39Q9H9C1 493 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 ORC3Q9UBD5 711 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-207ENST00000468925 MYO6Q9UM54 1294 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 RNF17Q9BXT8 1623 aaKnown RBP5.58□□□□□ -1.52
SF3B1-207ENST00000468925 DNMBPQ6XZF7 1577 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 SYNJ2O15056 1496 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 KIF13AQ9H1H9 1805 aa5.58□□□□□ -1.52
SF3B1-207ENST00000468925 RPAP1Q9BWH6 1393 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-207ENST00000468925 PBRM1Q86U86 1689 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 SASH1O94885 1247 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 ZSCAN22P10073 491 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-207ENST00000468925 SKILP12757 684 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 ELF1P32519 619 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 GATA4P43694 442 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 DRP2Q13474 957 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 KIF4BQ2VIQ3 1234 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 CCDC38Q502W7 563 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 TTC22Q5TAA0 569 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 ANKRD45Q5TZF3 282 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 WWC2Q6AWC2 1192 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 PHLDB3Q6NSJ2 640 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 CC2D1AQ6P1N0 951 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-207ENST00000468925 RBM43Q6ZSC3 357 aaKnown RBP5.57□□□□□ -1.52
SF3B1-207ENST00000468925 B4GALNT4Q76KP1 1039 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 ALDH16A1Q8IZ83 802 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 LARGE2Q8N3Y3 721 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 MICAL1Q8TDZ2 1067 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 NUDT8Q8WV74 236 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 JARID2Q92833 1246 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-207ENST00000468925 GTF3C6Q969F1 213 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 ZSCAN31Q96LW9 406 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-207ENST00000468925 HINFPQ9BQA5 517 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 UBE2OQ9C0C9 1292 aaKnown RBP5.57□□□□□ -1.52
SF3B1-207ENST00000468925 SCAND2PQ9GZW5 306 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-207ENST00000468925 OSBPL5Q9H0X9 879 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-207ENST00000468925 NUP62CLQ9H1M0 184 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 PRDM16Q9HAZ2 1276 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 TOMM22Q9NS69 142 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 ETAA1Q9NY74 926 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 CPSF2Q9P2I0 782 aaKnown RBP5.57□□□□□ -1.52
SF3B1-207ENST00000468925 ANAPC4Q9UJX5 808 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 KCNH4Q9UQ05 1017 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 STARD13Q9Y3M8 1113 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 IFT140Q96RY7 1462 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 NOS1P29475 1434 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 ASXL2Q76L83 1435 aa5.57□□□□□ -1.52
SF3B1-207ENST00000468925 NUP155O75694 1391 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 NSD2O96028 1365 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 KDRP35968 1356 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 AK9Q5TCS8 1911 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 DISP3Q9P2K9 1392 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 PLEKHD1A6NEE1 506 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 EBAG9O00559 213 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 MAP2K7O14733 419 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 SIN3BO75182 1162 aa5.56□□□□□ -1.52
SF3B1-207ENST00000468925 SPATA31C1P0DKV0 1188 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 311.3 ms