RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TRIM47Q96LD4 638 aa17.33■□□□□ 0.37
COL27A1-203ENST00000468565 PTCH2Q9Y6C5 1203 aa17.33■□□□□ 0.37
COL27A1-203ENST00000468565 USP17L12C9JPN9 530 aa17.33■□□□□ 0.36
COL27A1-203ENST00000468565 USP17L21D6R901 530 aa17.33■□□□□ 0.36
COL27A1-203ENST00000468565 HOXD10P28358 340 aa17.33■□□□□ 0.36
COL27A1-203ENST00000468565 GCLCP48506 637 aaPredicted RBP17.33■□□□□ 0.36
COL27A1-203ENST00000468565 RAB3GAP1Q15042 981 aa17.33■□□□□ 0.36
COL27A1-203ENST00000468565 FAM110CQ1W6H9 321 aa17.33■□□□□ 0.36
COL27A1-203ENST00000468565 GIMAP6Q6P9H5 292 aa17.33■□□□□ 0.36
COL27A1-203ENST00000468565 C12orf42Q96LP6 360 aa17.33■□□□□ 0.36
COL27A1-203ENST00000468565 FSD1Q9BTV5 496 aa17.33■□□□□ 0.36
COL27A1-203ENST00000468565 ASCC2Q9H1I8 757 aaPredicted RBP17.33■□□□□ 0.36
COL27A1-203ENST00000468565 ARPP21Q9UBL0 812 aaPredicted RBP17.33■□□□□ 0.36
COL27A1-203ENST00000468565 GNAT2P19087 354 aa17.32■□□□□ 0.36
COL27A1-203ENST00000468565 GUCY1A2P33402 732 aa17.32■□□□□ 0.36
COL27A1-203ENST00000468565 PDE1AP54750 535 aa17.32■□□□□ 0.36
COL27A1-203ENST00000468565 FCGRTP55899 365 aa17.32■□□□□ 0.36
COL27A1-203ENST00000468565 SOX10P56693 466 aa17.32■□□□□ 0.36
COL27A1-203ENST00000468565 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
COL27A1-203ENST00000468565 SRRDQ9UH36 339 aa17.32■□□□□ 0.36
COL27A1-203ENST00000468565 GREB1LQ9C091 1923 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-203ENST00000468565 GPAA1O43292 621 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 FMNL1O95466 1100 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-203ENST00000468565 IGHDP01880 384 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 USP14P54578 494 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 CTR9Q6PD62 1173 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 C16orf86Q6ZW13 317 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 DYNLL2Q96FJ2 89 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 FEZ1Q99689 392 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 KIAA1683Q9H0B3 1180 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 CENPFP49454 3210 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 GSG1L2A8MUP6 293 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
COL27A1-203ENST00000468565 SBK1Q52WX2 424 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 TMEM179Q6ZVK1 233 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 SLC44A5Q8NCS7 719 aa17.31■□□□□ 0.36
COL27A1-203ENST00000468565 KIAA0100Q14667 2235 aaKnown RBP17.3■□□□□ 0.36
COL27A1-203ENST00000468565 CYP2D7A0A087X1C5 515 aa17.3■□□□□ 0.36
COL27A1-203ENST00000468565 M0R2C6 588 aa17.3■□□□□ 0.36
COL27A1-203ENST00000468565 CDK8P49336 464 aa17.3■□□□□ 0.36
COL27A1-203ENST00000468565 SEPT2Q15019 361 aa17.3■□□□□ 0.36
COL27A1-203ENST00000468565 ZMYM1Q5SVZ6 1142 aa17.3■□□□□ 0.36
COL27A1-203ENST00000468565 ANKRD13CQ8N6S4 541 aa17.3■□□□□ 0.36
COL27A1-203ENST00000468565 EVI5LQ96CN4 794 aa17.3■□□□□ 0.36
COL27A1-203ENST00000468565 CCDC17Q96LX7 622 aa17.3■□□□□ 0.36
COL27A1-203ENST00000468565 LNPKQ9C0E8 428 aa17.3■□□□□ 0.36
COL27A1-203ENST00000468565 MPHOSPH10O00566 681 aaKnown RBP17.29■□□□□ 0.36
COL27A1-203ENST00000468565 MLLT1Q03111 559 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-203ENST00000468565 SLC9C1Q4G0N8 1177 aa17.29■□□□□ 0.36
COL27A1-203ENST00000468565 NBPF11Q86T75 865 aa17.29■□□□□ 0.36
COL27A1-203ENST00000468565 TICAM2Q86XR7 235 aa17.29■□□□□ 0.36
COL27A1-203ENST00000468565 MYPNQ86TC9 1320 aa17.29■□□□□ 0.36
COL27A1-203ENST00000468565 ROBO3Q96MS0 1386 aa17.29■□□□□ 0.36
COL27A1-203ENST00000468565 ACER1Q8TDN7 264 aa17.29■□□□□ 0.36
COL27A1-203ENST00000468565 GTF3C2Q8WUA4 911 aaPredicted RBP17.29■□□□□ 0.36
COL27A1-203ENST00000468565 ZNF333Q96JL9 665 aa17.29■□□□□ 0.36
COL27A1-203ENST00000468565 MORF4L1Q9UBU8 362 aa17.29■□□□□ 0.36
COL27A1-203ENST00000468565 ECM2O94769 699 aaPredicted RBP17.28■□□□□ 0.36
COL27A1-203ENST00000468565 NUCB1Q02818 461 aa17.28■□□□□ 0.36
COL27A1-203ENST00000468565 CHD1LQ86WJ1 897 aa17.28■□□□□ 0.36
COL27A1-203ENST00000468565 P2RX7Q99572 595 aaKnown RBP17.28■□□□□ 0.36
COL27A1-203ENST00000468565 PARP14Q460N5 1801 aa17.28■□□□□ 0.36
COL27A1-203ENST00000468565 SMIM22K7EJ46 135 aa17.27■□□□□ 0.36
COL27A1-203ENST00000468565 AKR1B1P15121 316 aa17.27■□□□□ 0.36
COL27A1-203ENST00000468565 HERVK_113P62684 666 aa17.27■□□□□ 0.36
COL27A1-203ENST00000468565 EPB41L4AQ9HCS5 686 aaPredicted RBP17.27■□□□□ 0.36
COL27A1-203ENST00000468565 PLXNB2O15031 1838 aa17.27■□□□□ 0.36
COL27A1-203ENST00000468565 USP17L15C9J2P7 530 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 PATL2C9JE40 543 aaKnown RBP17.27■□□□□ 0.35
COL27A1-203ENST00000468565 USP17L13C9JLJ4 530 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 USP17L11C9JVI0 530 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 USP17L18D6R9N7 530 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 USP17L22D6RA61 530 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 USP17L17D6RBQ6 530 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 USP17L19D6RCP7 530 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 USP17L20D6RJB6 530 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 TNPO2O14787 897 aaKnown RBP17.27■□□□□ 0.35
COL27A1-203ENST00000468565 VCAM1P19320 739 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 PRKCZQ05513 592 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 USP17L24Q0WX57 530 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 ZYXQ15942 572 aaKnown RBP17.27■□□□□ 0.35
COL27A1-203ENST00000468565 RAET1EQ8TD07 263 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 SEC62Q99442 399 aaKnown RBP17.27■□□□□ 0.35
COL27A1-203ENST00000468565 RLFQ13129 1914 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 MYH4Q9Y623 1939 aa17.27■□□□□ 0.35
COL27A1-203ENST00000468565 TDO2P48775 406 aa17.26■□□□□ 0.35
COL27A1-203ENST00000468565 IFNL3Q8IZI9 196 aa17.26■□□□□ 0.35
COL27A1-203ENST00000468565 NACAP1Q9BZK3 213 aa17.26■□□□□ 0.35
COL27A1-203ENST00000468565 OSBPL3Q9H4L5 887 aa17.26■□□□□ 0.35
COL27A1-203ENST00000468565 A0A1W2PRG0 241 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 APPP05067 770 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 CATSPERGQ6ZRH7 1159 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 COA7Q96BR5 231 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 SH2D4AQ9H788 454 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 ARHGEF10LQ9HCE6 1279 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 MINDY4BA8MYZ0 360 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 ICA1Q05084 483 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 C8orf34Q49A92 452 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 PLEKHM2Q8IWE5 1019 aa17.25■□□□□ 0.35
COL27A1-203ENST00000468565 SH3TC2Q8TF17 1288 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms