RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CYP2D6P10635 497 aa29.66■■■□□ 2.34
PTCH1-210ENST00000468211 PAGR1Q9BTK6 254 aa29.66■■■□□ 2.34
PTCH1-210ENST00000468211 CRISPLD2Q9H0B8 497 aa29.66■■■□□ 2.34
PTCH1-210ENST00000468211 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.66■■■□□ 2.34
PTCH1-210ENST00000468211 PORCNQ9H237 461 aa29.66■■■□□ 2.34
PTCH1-210ENST00000468211 ARMT1Q9H993 441 aa29.66■■■□□ 2.34
PTCH1-210ENST00000468211 PAG1Q9NWQ8 432 aa29.66■■■□□ 2.34
PTCH1-210ENST00000468211 MCM9Q9NXL9 1143 aa29.66■■■□□ 2.34
PTCH1-210ENST00000468211 ATP5JP18859 108 aa29.65■■■□□ 2.34
PTCH1-210ENST00000468211 CYP2B6P20813 491 aa29.65■■■□□ 2.34
PTCH1-210ENST00000468211 ERVK-9P63128 1117 aa29.65■■■□□ 2.34
PTCH1-210ENST00000468211 ERVK-24P63145 666 aa29.65■■■□□ 2.34
PTCH1-210ENST00000468211 TRIB2Q92519 343 aa29.65■■■□□ 2.34
PTCH1-210ENST00000468211 KIAA1683Q9H0B3 1180 aa29.65■■■□□ 2.34
PTCH1-210ENST00000468211 DCP1AQ9NPI6 582 aaPredicted RBP29.65■■■□□ 2.34
PTCH1-210ENST00000468211 TRIOBPQ9H2D6 2365 aa29.65■■■□□ 2.34
PTCH1-210ENST00000468211 CHMP4BQ9H444 224 aaKnown RBP29.64■■■□□ 2.34
PTCH1-210ENST00000468211 PRKAB2O43741 272 aa29.63■■■□□ 2.33
PTCH1-210ENST00000468211 SMARCA5O60264 1052 aaPredicted RBP29.63■■■□□ 2.33
PTCH1-210ENST00000468211 CNMDO75829 334 aa29.63■■■□□ 2.33
PTCH1-210ENST00000468211 ADD2P35612 726 aa29.63■■■□□ 2.33
PTCH1-210ENST00000468211 PDE3AQ14432 1141 aa29.63■■■□□ 2.33
PTCH1-210ENST00000468211 SEPT2Q15019 361 aa29.63■■■□□ 2.33
PTCH1-210ENST00000468211 SLC44A5Q8NCS7 719 aa29.63■■■□□ 2.33
PTCH1-210ENST00000468211 HTATIP2Q9BUP3 242 aa29.63■■■□□ 2.33
PTCH1-210ENST00000468211 CABP5Q9NP86 173 aa29.63■■■□□ 2.33
PTCH1-210ENST00000468211 USP17L15C9J2P7 530 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 USP17L13C9JLJ4 530 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 USP17L11C9JVI0 530 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 USP17L18D6R9N7 530 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 USP17L22D6RA61 530 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 USP17L17D6RBQ6 530 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 USP17L19D6RCP7 530 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 USP17L20D6RJB6 530 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 VCAM1P19320 739 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 USP17L24Q0WX57 530 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 HAUS7Q99871 368 aa29.62■■■□□ 2.33
PTCH1-210ENST00000468211 SMIM22K7EJ46 135 aa29.61■■■□□ 2.33
PTCH1-210ENST00000468211 FXR1P51114 621 aaKnown RBP eCLIP29.61■■■□□ 2.33
PTCH1-210ENST00000468211 CATSPERGQ6ZRH7 1159 aa29.61■■■□□ 2.33
PTCH1-210ENST00000468211 USP6NLQ92738 828 aa29.61■■■□□ 2.33
PTCH1-210ENST00000468211 NUDT12Q9BQG2 462 aa29.61■■■□□ 2.33
PTCH1-210ENST00000468211 MBD4O95243 580 aa29.6■■■□□ 2.33
PTCH1-210ENST00000468211 MAPK4P31152 587 aa29.6■■■□□ 2.33
PTCH1-210ENST00000468211 USP14P54578 494 aa29.6■■■□□ 2.33
PTCH1-210ENST00000468211 GPR142Q7Z601 462 aa29.6■■■□□ 2.33
PTCH1-210ENST00000468211 DIS3LQ8TF46 1054 aaKnown RBP29.6■■■□□ 2.33
PTCH1-210ENST00000468211 GTF3C2Q8WUA4 911 aaPredicted RBP29.6■■■□□ 2.33
PTCH1-210ENST00000468211 DYNLL2Q96FJ2 89 aa29.6■■■□□ 2.33
PTCH1-210ENST00000468211 PCDH10Q9P2E7 1040 aa29.6■■■□□ 2.33
PTCH1-210ENST00000468211 RPTORQ8N122 1335 aa29.6■■■□□ 2.33
PTCH1-210ENST00000468211 RLFQ13129 1914 aa29.59■■■□□ 2.33
PTCH1-210ENST00000468211 A0A1W2PRG0 241 aa29.59■■■□□ 2.33
PTCH1-210ENST00000468211 CHRDL2Q6WN34 429 aa29.59■■■□□ 2.33
PTCH1-210ENST00000468211 PAWRQ96IZ0 340 aaKnown RBP29.59■■■□□ 2.33
PTCH1-210ENST00000468211 LRRCC1Q9C099 1032 aa29.59■■■□□ 2.33
PTCH1-210ENST00000468211 HMX1Q9NP08 348 aaPredicted RBP29.59■■■□□ 2.33
PTCH1-210ENST00000468211 MPHOSPH10O00566 681 aaKnown RBP29.58■■■□□ 2.33
PTCH1-210ENST00000468211 XRCC5P13010 732 aaKnown RBP29.58■■■□□ 2.33
PTCH1-210ENST00000468211 CCL14Q16627 93 aa29.58■■■□□ 2.33
PTCH1-210ENST00000468211 MORN1Q5T089 497 aa29.58■■■□□ 2.33
PTCH1-210ENST00000468211 MAP3K21Q5TCX8 1036 aa29.58■■■□□ 2.33
PTCH1-210ENST00000468211 SOCS4Q8WXH5 440 aa29.58■■■□□ 2.33
PTCH1-210ENST00000468211 RABGAP1Q9Y3P9 1069 aa29.58■■■□□ 2.33
PTCH1-210ENST00000468211 RANBP2P49792 3224 aaKnown RBP29.58■■■□□ 2.33
PTCH1-210ENST00000468211 CYP2D7A0A087X1C5 515 aa29.57■■■□□ 2.32
PTCH1-210ENST00000468211 PLEKHH3Q7Z736 793 aa29.57■■■□□ 2.32
PTCH1-210ENST00000468211 RPAP3Q9H6T3 665 aaPredicted RBP29.57■■■□□ 2.32
PTCH1-210ENST00000468211 BTBD7Q9P203 1132 aa29.57■■■□□ 2.32
PTCH1-210ENST00000468211 CCAR1Q8IX12 1150 aaKnown RBP29.56■■■□□ 2.32
PTCH1-210ENST00000468211 SPDYE16A6NNV3 312 aaPredicted RBP29.55■■■□□ 2.32
PTCH1-210ENST00000468211 PRKAR2AP13861 404 aaKnown RBP29.55■■■□□ 2.32
PTCH1-210ENST00000468211 CAPN2P17655 700 aa29.55■■■□□ 2.32
PTCH1-210ENST00000468211 MNX1P50219 401 aaPredicted RBP29.55■■■□□ 2.32
PTCH1-210ENST00000468211 KIAA1755Q5JYT7 1200 aa29.55■■■□□ 2.32
PTCH1-210ENST00000468211 CLEC10AQ8IUN9 316 aa29.55■■■□□ 2.32
PTCH1-210ENST00000468211 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.55■■■□□ 2.32
PTCH1-210ENST00000468211 LBX2Q6XYB7 198 aa29.54■■■□□ 2.32
PTCH1-210ENST00000468211 SIAH1Q8IUQ4 282 aa29.54■■■□□ 2.32
PTCH1-210ENST00000468211 ATP8A2Q9NTI2 1148 aa29.54■■■□□ 2.32
PTCH1-210ENST00000468211 RBM27Q9P2N5 1060 aaKnown RBP29.54■■■□□ 2.32
PTCH1-210ENST00000468211 PARP14Q460N5 1801 aa29.53■■■□□ 2.32
PTCH1-210ENST00000468211 AKR1B1P15121 316 aa29.53■■■□□ 2.32
PTCH1-210ENST00000468211 RGS2P41220 211 aa29.53■■■□□ 2.32
PTCH1-210ENST00000468211 CACNB2Q08289 660 aaPredicted RBP29.53■■■□□ 2.32
PTCH1-210ENST00000468211 UBE3CQ15386 1083 aa29.53■■■□□ 2.32
PTCH1-210ENST00000468211 PUS7LQ9H0K6 701 aaKnown RBP29.53■■■□□ 2.32
PTCH1-210ENST00000468211 SWAP70Q9UH65 585 aa29.53■■■□□ 2.32
PTCH1-210ENST00000468211 NR2E3Q9Y5X4 410 aa29.53■■■□□ 2.32
PTCH1-210ENST00000468211 A0A0G2JMZ2 1700 aa29.52■■■□□ 2.32
PTCH1-210ENST00000468211 ZKSCAN1P17029 563 aaPredicted RBP29.52■■■□□ 2.32
PTCH1-210ENST00000468211 C12orf60Q5U649 245 aa29.52■■■□□ 2.32
PTCH1-210ENST00000468211 TMEM179Q6ZVK1 233 aa29.52■■■□□ 2.32
PTCH1-210ENST00000468211 NECAB2Q7Z6G3 386 aa29.52■■■□□ 2.32
PTCH1-210ENST00000468211 FRMPD3Q5JV73 1810 aa29.52■■■□□ 2.32
PTCH1-210ENST00000468211 USP17L12C9JPN9 530 aa29.51■■■□□ 2.31
PTCH1-210ENST00000468211 USP17L21D6R901 530 aa29.51■■■□□ 2.31
PTCH1-210ENST00000468211 EVI5O60447 810 aa29.51■■■□□ 2.31
PTCH1-210ENST00000468211 MAP2K5Q13163 448 aa29.51■■■□□ 2.31
PTCH1-210ENST00000468211 ANKLE1Q8NAG6 615 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms