RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 MRPL18Q9H0U6 180 aaKnown RBP6.93□□□□□ -1.3
U2AF1-207ENST00000468039 RGS17Q9UGC6 210 aaPredicted RBP6.93□□□□□ -1.3
U2AF1-207ENST00000468039 SBNO1A3KN83 1393 aa6.93□□□□□ -1.3
U2AF1-207ENST00000468039 POLR3AO14802 1390 aaPredicted RBP6.93□□□□□ -1.3
U2AF1-207ENST00000468039 COL22A1Q8NFW1 1626 aaPredicted RBP6.92□□□□□ -1.3
U2AF1-207ENST00000468039 E9PSI1 815 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 DLL1O00548 723 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 ESRRAP11474 423 aaPredicted RBP6.92□□□□□ -1.3
U2AF1-207ENST00000468039 ITPKAP23677 461 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 GSTT1P30711 240 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 C8orf37Q96NL8 207 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 SETDB2Q96T68 719 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 POLR3GLQ9BT43 218 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 SLC12A5Q9H2X9 1139 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 ABCB6Q9NP58 842 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 PCMTD2Q9NV79 361 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 USP6P35125 1406 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 CD163L1Q9NR16 1453 aa6.92□□□□□ -1.3
U2AF1-207ENST00000468039 ALS2Q96Q42 1657 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 SOX1O00570 391 aaPredicted RBP6.91□□□□□ -1.3
U2AF1-207ENST00000468039 GNA15P30679 374 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 TMF1P82094 1093 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 GSTM4Q03013 218 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 RPS26P11Q5JNZ5 115 aaPredicted RBP6.91□□□□□ -1.3
U2AF1-207ENST00000468039 LCE4AQ5TA78 99 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 SHISA2Q6UWI4 295 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 GALNT11Q8NCW6 608 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 KLHDC7BQ96G42 594 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
U2AF1-207ENST00000468039 BCL2L13Q9BXK5 485 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 ZNF576Q9H609 170 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 SOX17Q9H6I2 414 aaPredicted RBP6.91□□□□□ -1.3
U2AF1-207ENST00000468039 C12orf49Q9H741 205 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 AKAP2Q9Y2D5 859 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 ARHGEF10O15013 1369 aa6.91□□□□□ -1.3
U2AF1-207ENST00000468039 SELPP16109 830 aa6.9□□□□□ -1.3
U2AF1-207ENST00000468039 EIF4BP23588 611 aaKnown RBP6.9□□□□□ -1.3
U2AF1-207ENST00000468039 PSMD2Q13200 908 aa6.9□□□□□ -1.3
U2AF1-207ENST00000468039 DUOXA2Q1HG44 320 aa6.9□□□□□ -1.3
U2AF1-207ENST00000468039 GLIS3Q8NEA6 775 aa6.9□□□□□ -1.3
U2AF1-207ENST00000468039 FAM8A1Q9UBU6 413 aa6.9□□□□□ -1.3
U2AF1-207ENST00000468039 AFF2P51816 1311 aa6.9□□□□□ -1.3
U2AF1-207ENST00000468039 A0A1W2PP64 1363 aa6.9□□□□□ -1.31
U2AF1-207ENST00000468039 ABCA3Q99758 1704 aa6.9□□□□□ -1.31
U2AF1-207ENST00000468039 NLRP12P59046 1061 aa6.89□□□□□ -1.31
U2AF1-207ENST00000468039 PPP2R3AQ06190 1150 aa6.89□□□□□ -1.31
U2AF1-207ENST00000468039 ACAD11Q709F0 780 aa6.89□□□□□ -1.31
U2AF1-207ENST00000468039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.89□□□□□ -1.31
U2AF1-207ENST00000468039 MRS2Q9HD23 443 aa6.89□□□□□ -1.31
U2AF1-207ENST00000468039 GPN3Q9UHW5 284 aaPredicted RBP6.89□□□□□ -1.31
U2AF1-207ENST00000468039 TTC21BQ7Z4L5 1316 aa6.89□□□□□ -1.31
U2AF1-207ENST00000468039 KTN1Q86UP2 1357 aaKnown RBP6.89□□□□□ -1.31
U2AF1-207ENST00000468039 CPSF1Q10570 1443 aaKnown RBP6.89□□□□□ -1.31
U2AF1-207ENST00000468039 SSH2Q76I76 1423 aa6.89□□□□□ -1.31
U2AF1-207ENST00000468039 AKAP12Q02952 1782 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 PIK3C2AO00443 1686 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 PHRF1Q9P1Y6 1649 aaKnown RBP6.88□□□□□ -1.31
U2AF1-207ENST00000468039 NRKQ7Z2Y5 1582 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 CYP11A1P05108 521 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 HNRNPUQ00839 825 aaKnown RBP eCLIP6.88□□□□□ -1.31
U2AF1-207ENST00000468039 ZNF423Q2M1K9 1284 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 HP1BP3Q5SSJ5 553 aaPredicted RBP6.88□□□□□ -1.31
U2AF1-207ENST00000468039 FBXO33Q7Z6M2 555 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 TXNRD3Q86VQ6 643 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 NME9Q86XW9 330 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 USP26Q9BXU7 913 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 OSBPL7Q9BZF2 842 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 AKTIPQ9H8T0 292 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 PARP2Q9UGN5 583 aa6.88□□□□□ -1.31
U2AF1-207ENST00000468039 MON2Q7Z3U7 1717 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 CRYBG1Q9Y4K1 1723 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 B3GALT4O96024 378 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 USP17L7P0C7H9 530 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 ZC3H6P61129 1189 aaKnown RBP6.87□□□□□ -1.31
U2AF1-207ENST00000468039 ADGRE1Q14246 886 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 MBTPS1Q14703 1052 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 CHRNA2Q15822 529 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 HDGFL2Q7Z4V5 671 aaPredicted RBP6.87□□□□□ -1.31
U2AF1-207ENST00000468039 TMEM130Q8N3G9 435 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 GIPC2Q8TF65 315 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 PUS7Q96PZ0 661 aaKnown RBP6.87□□□□□ -1.31
U2AF1-207ENST00000468039 CEP44Q9C0F1 390 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 TERF2IPQ9NYB0 399 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 PPM1HQ9ULR3 514 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 AK5Q9Y6K8 562 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 MYOM1P52179 1685 aa6.87□□□□□ -1.31
U2AF1-207ENST00000468039 ANKRD36BQ8N2N9 1353 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 KIAA0232Q92628 1395 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 USP19O94966 1318 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 FAM83GA6ND36 823 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 DDX3YO15523 660 aaKnown RBP6.86□□□□□ -1.31
U2AF1-207ENST00000468039 ZNF157P51786 506 aaPredicted RBP6.86□□□□□ -1.31
U2AF1-207ENST00000468039 DAB2P98082 770 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 AP3B2Q13367 1082 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 HGSNATQ68CP4 663 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 ZNF772Q68DY9 489 aaPredicted RBP6.86□□□□□ -1.31
U2AF1-207ENST00000468039 WFDC12Q8WWY7 111 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 CORO1BQ9BR76 489 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 RUSC1Q9BVN2 902 aa6.86□□□□□ -1.31
U2AF1-207ENST00000468039 TMEM39AQ9NV64 488 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms