RNA–Protein interactions for RNA: ENST00000467706.1

NOD1-207, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 905 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-207ENST00000467706 KIF3AQ9Y496 699 aa14.27□□□□□ -0.13
NOD1-207ENST00000467706 GREB1LQ9C091 1923 aaPredicted RBP14.26□□□□□ -0.13
NOD1-207ENST00000467706 CCDC196A0A1B0GTZ2 297 aa14.26□□□□□ -0.13
NOD1-207ENST00000467706 PDCP20941 246 aa14.26□□□□□ -0.13
NOD1-207ENST00000467706 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
NOD1-207ENST00000467706 PPP2R5BQ15173 497 aa14.26□□□□□ -0.13
NOD1-207ENST00000467706 PPP4R3BQ5MIZ7 849 aa14.26□□□□□ -0.13
NOD1-207ENST00000467706 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
NOD1-207ENST00000467706 FAM184AQ8NB25 1140 aa14.26□□□□□ -0.13
NOD1-207ENST00000467706 FANCBQ8NB91 859 aa14.26□□□□□ -0.13
NOD1-207ENST00000467706 DDX11Q96FC9 970 aa14.26□□□□□ -0.13
NOD1-207ENST00000467706 CEP95Q96GE4 821 aa14.26□□□□□ -0.13
NOD1-207ENST00000467706 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
NOD1-207ENST00000467706 IGKV6D-41A0A0C4DH26 115 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 TBC1D12O60347 775 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 TOP1P11387 765 aaKnown RBP14.25□□□□□ -0.13
NOD1-207ENST00000467706 CDC27P30260 824 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 ADD1P35611 737 aaKnown RBP14.25□□□□□ -0.13
NOD1-207ENST00000467706 TROAPQ12815 778 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 ABCB5Q2M3G0 1257 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 CDAN1Q8IWY9 1227 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 PNMA1Q8ND90 353 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 CTCFLQ8NI51 663 aaPredicted RBP14.25□□□□□ -0.13
NOD1-207ENST00000467706 L3MBTL3Q96JM7 780 aaPredicted RBP14.25□□□□□ -0.13
NOD1-207ENST00000467706 TMEM47Q9BQJ4 181 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 RBM28Q9NW13 759 aaKnown RBP14.25□□□□□ -0.13
NOD1-207ENST00000467706 MTMR4Q9NYA4 1195 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 GGA3Q9NZ52 723 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 PGAP2Q9UHJ9 254 aa14.25□□□□□ -0.13
NOD1-207ENST00000467706 GDF11O95390 407 aa14.24□□□□□ -0.13
NOD1-207ENST00000467706 PDIA4P13667 645 aaKnown RBP14.24□□□□□ -0.13
NOD1-207ENST00000467706 SYT1P21579 422 aa14.24□□□□□ -0.13
NOD1-207ENST00000467706 NOVP48745 357 aa14.24□□□□□ -0.13
NOD1-207ENST00000467706 HIRAP54198 1017 aaPredicted RBP14.24□□□□□ -0.13
NOD1-207ENST00000467706 PKP1Q13835 747 aa14.24□□□□□ -0.13
NOD1-207ENST00000467706 LARP1BQ659C4 914 aaKnown RBP14.24□□□□□ -0.13
NOD1-207ENST00000467706 TMEM179Q6ZVK1 233 aa14.24□□□□□ -0.13
NOD1-207ENST00000467706 TEPSINQ96N21 525 aa14.24□□□□□ -0.13
NOD1-207ENST00000467706 DEFB129Q9H1M3 183 aa14.24□□□□□ -0.13
NOD1-207ENST00000467706 CABP5Q9NP86 173 aa14.24□□□□□ -0.13
NOD1-207ENST00000467706 FAM217BQ9NTX9 383 aaPredicted RBP14.24□□□□□ -0.13
NOD1-207ENST00000467706 SCAF8Q9UPN6 1271 aaKnown RBP14.24□□□□□ -0.13
NOD1-207ENST00000467706 PITPNM2Q9BZ72 1349 aa14.23□□□□□ -0.13
NOD1-207ENST00000467706 WDR33Q9C0J8 1336 aaKnown RBP14.23□□□□□ -0.13
NOD1-207ENST00000467706 GLTPD2A6NH11 291 aa14.23□□□□□ -0.13
NOD1-207ENST00000467706 STX6O43752 255 aa14.23□□□□□ -0.13
NOD1-207ENST00000467706 PPFIA3O75145 1194 aa14.23□□□□□ -0.13
NOD1-207ENST00000467706 BRD1O95696 1058 aa14.23□□□□□ -0.13
NOD1-207ENST00000467706 TTLL1O95922 423 aa14.23□□□□□ -0.13
NOD1-207ENST00000467706 KIF5BP33176 963 aa14.23□□□□□ -0.13
NOD1-207ENST00000467706 MIGA2Q7L4E1 593 aa14.23□□□□□ -0.13
NOD1-207ENST00000467706 ORC3Q9UBD5 711 aaPredicted RBP14.23□□□□□ -0.13
NOD1-207ENST00000467706 PPP2R3BQ9Y5P8 575 aa14.23□□□□□ -0.13
NOD1-207ENST00000467706 STK36Q9NRP7 1315 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 VPS37CA5D8V6 355 aaPredicted RBP14.22□□□□□ -0.13
NOD1-207ENST00000467706 IFNAR1P17181 557 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 ATP2B2Q01814 1243 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 MAP3K10Q02779 954 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 SSRP1Q08945 709 aaKnown RBP14.22□□□□□ -0.13
NOD1-207ENST00000467706 GRM4Q14833 912 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 NTRK3Q16288 839 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 CLEC10AQ8IUN9 316 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 TNPO1Q92973 898 aaKnown RBP14.22□□□□□ -0.13
NOD1-207ENST00000467706 HOOK2Q96ED9 719 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 MAP3K14Q99558 947 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 KANSL2Q9H9L4 492 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 CLIP2Q9UDT6 1046 aa14.22□□□□□ -0.13
NOD1-207ENST00000467706 SCN4AP35499 1836 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 H3BQV1 296 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 FMNL1O95466 1100 aaPredicted RBP14.21□□□□□ -0.13
NOD1-207ENST00000467706 GH2P01242 217 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 FDPSP14324 419 aaKnown RBP14.21□□□□□ -0.13
NOD1-207ENST00000467706 EPHX2P34913 555 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 ICA1Q05084 483 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 RRP1BQ14684 758 aaKnown RBP14.21□□□□□ -0.13
NOD1-207ENST00000467706 SEPT2Q15019 361 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 SHROOM1Q2M3G4 852 aaPredicted RBP14.21□□□□□ -0.13
NOD1-207ENST00000467706 IFFO2Q5TF58 517 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 FOXD4L5Q5VV16 416 aaPredicted RBP14.21□□□□□ -0.13
NOD1-207ENST00000467706 TMTC3Q6ZXV5 915 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 USP50Q70EL3 339 aaPredicted RBP14.21□□□□□ -0.13
NOD1-207ENST00000467706 TRIM22Q8IYM9 498 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 LRRC47Q8N1G4 583 aaKnown RBP14.21□□□□□ -0.13
NOD1-207ENST00000467706 FOXD4L4Q8WXT5 416 aaPredicted RBP14.21□□□□□ -0.13
NOD1-207ENST00000467706 PHKBQ93100 1093 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 DCPSQ96C86 337 aaKnown RBP14.21□□□□□ -0.13
NOD1-207ENST00000467706 SLC26A6Q9BXS9 759 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 NYAP2Q9P242 653 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 MTMR7Q9Y216 660 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 ZDHHC9Q9Y397 364 aa14.21□□□□□ -0.13
NOD1-207ENST00000467706 MYH4Q9Y623 1939 aa14.21□□□□□ -0.14
NOD1-207ENST00000467706 IQCA1LA6NCM1 817 aa14.2□□□□□ -0.14
NOD1-207ENST00000467706 DCAF8L1A6NGE4 600 aa14.2□□□□□ -0.14
NOD1-207ENST00000467706 PLEKHA8P1O95397 391 aa14.2□□□□□ -0.14
NOD1-207ENST00000467706 ZSCAN22P10073 491 aaPredicted RBP14.2□□□□□ -0.14
NOD1-207ENST00000467706 EEF2P13639 858 aaKnown RBP14.2□□□□□ -0.14
NOD1-207ENST00000467706 GNAQP50148 359 aa14.2□□□□□ -0.14
NOD1-207ENST00000467706 FOSBP53539 338 aa14.2□□□□□ -0.14
NOD1-207ENST00000467706 NBPF12Q5TAG4 269 aaPredicted RBP14.2□□□□□ -0.14
NOD1-207ENST00000467706 DCAF15Q66K64 600 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms