RNA–Protein interactions for RNA: ENST00000467286.1

CRAMP1-205, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 664 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-205ENST00000467286 USP17L17D6RBQ6 530 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 USP17L19D6RCP7 530 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 USP17L20D6RJB6 530 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 TFRCP02786 760 aaKnown RBP16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 ERVK-9P63128 1117 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 ERVK-24P63145 666 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 USP17L24Q0WX57 530 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 LCORLQ8N3X6 602 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 SDR42E1Q8WUS8 393 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 EDC3Q96F86 508 aaKnown RBP16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 DEFB118Q96PH6 123 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 HAUS7Q99871 368 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 KIAA1683Q9H0B3 1180 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 BOLA2Q9H3K6 86 aa16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 CWC22Q9HCG8 908 aaKnown RBP16.81■□□□□ 0.28
CRAMP1-205ENST00000467286 H0YGN5 161 aa16.8■□□□□ 0.28
CRAMP1-205ENST00000467286 ADD2P35612 726 aa16.8■□□□□ 0.28
CRAMP1-205ENST00000467286 GABPAQ06546 454 aa16.8■□□□□ 0.28
CRAMP1-205ENST00000467286 C20orf194Q5TEA3 1177 aa16.8■□□□□ 0.28
CRAMP1-205ENST00000467286 AMOTL1Q8IY63 956 aa16.8■□□□□ 0.28
CRAMP1-205ENST00000467286 NUDT12Q9BQG2 462 aa16.8■□□□□ 0.28
CRAMP1-205ENST00000467286 TXNRD2Q9NNW7 524 aa16.8■□□□□ 0.28
CRAMP1-205ENST00000467286 DCP1AQ9NPI6 582 aaPredicted RBP16.8■□□□□ 0.28
CRAMP1-205ENST00000467286 GJD2Q9UKL4 321 aa16.8■□□□□ 0.28
CRAMP1-205ENST00000467286 ALPK3Q96L96 1907 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 MPHOSPH10O00566 681 aaKnown RBP16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 MBD4O95243 580 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 VCAM1P19320 739 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 CCNA1P78396 465 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 TRMT44Q8IYL2 757 aaKnown RBP16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 DDRGK1Q96HY6 314 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 ARMT1Q9H993 441 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 PCDH10Q9P2E7 1040 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 RBPJLQ9UBG7 517 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 SWAP70Q9UH65 585 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 RABGAP1Q9Y3P9 1069 aa16.79■□□□□ 0.28
CRAMP1-205ENST00000467286 RPTORQ8N122 1335 aa16.78■□□□□ 0.28
CRAMP1-205ENST00000467286 XRCC5P13010 732 aaKnown RBP16.78■□□□□ 0.28
CRAMP1-205ENST00000467286 CYP2B6P20813 491 aa16.78■□□□□ 0.28
CRAMP1-205ENST00000467286 ZSCAN25Q6NSZ9 544 aa16.78■□□□□ 0.28
CRAMP1-205ENST00000467286 ACER1Q8TDN7 264 aa16.78■□□□□ 0.28
CRAMP1-205ENST00000467286 GPATCH3Q96I76 525 aa16.78■□□□□ 0.28
CRAMP1-205ENST00000467286 CRISPLD2Q9H0B8 497 aa16.78■□□□□ 0.28
CRAMP1-205ENST00000467286 HMX1Q9NP08 348 aaPredicted RBP16.78■□□□□ 0.28
CRAMP1-205ENST00000467286 NR2E3Q9Y5X4 410 aa16.78■□□□□ 0.28
CRAMP1-205ENST00000467286 A0A0G2JMZ2 1700 aa16.78■□□□□ 0.28
CRAMP1-205ENST00000467286 FRMPD3Q5JV73 1810 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 PEX10O60683 326 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 GLRX3O76003 335 aaKnown RBP16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 ZKSCAN1P17029 563 aaPredicted RBP16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 RGS2P41220 211 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 SEPT2Q15019 361 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 CATSPERGQ6ZRH7 1159 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 TMEM179Q6ZVK1 233 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 GPR142Q7Z601 462 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 PLEKHH3Q7Z736 793 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 ANKLE1Q8NAG6 615 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 TRIB2Q92519 343 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 PORCNQ9H237 461 aa16.77■□□□□ 0.28
CRAMP1-205ENST00000467286 PARP14Q460N5 1801 aa16.77■□□□□ 0.27
CRAMP1-205ENST00000467286 ZNF236Q9UL36 1845 aa16.76■□□□□ 0.27
CRAMP1-205ENST00000467286 GUCY1A2P33402 732 aa16.76■□□□□ 0.27
CRAMP1-205ENST00000467286 UBE3CQ15386 1083 aa16.76■□□□□ 0.27
CRAMP1-205ENST00000467286 LBX2Q6XYB7 198 aa16.76■□□□□ 0.27
CRAMP1-205ENST00000467286 APBA2Q99767 749 aa16.76■□□□□ 0.27
CRAMP1-205ENST00000467286 RPAP3Q9H6T3 665 aaPredicted RBP16.76■□□□□ 0.27
CRAMP1-205ENST00000467286 SH2D4AQ9H788 454 aa16.76■□□□□ 0.27
CRAMP1-205ENST00000467286 COLQQ9Y215 455 aaPredicted RBP16.76■□□□□ 0.27
CRAMP1-205ENST00000467286 RLFQ13129 1914 aa16.76■□□□□ 0.27
CRAMP1-205ENST00000467286 DNAH12Q6ZR08 3092 aa16.75■□□□□ 0.27
CRAMP1-205ENST00000467286 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
CRAMP1-205ENST00000467286 CYP2D6P10635 497 aa16.75■□□□□ 0.27
CRAMP1-205ENST00000467286 PRKAR2AP13861 404 aaKnown RBP16.75■□□□□ 0.27
CRAMP1-205ENST00000467286 EVX2Q03828 476 aa16.75■□□□□ 0.27
CRAMP1-205ENST00000467286 Q3C1V9 767 aa16.75■□□□□ 0.27
CRAMP1-205ENST00000467286 NECAB2Q7Z6G3 386 aa16.75■□□□□ 0.27
CRAMP1-205ENST00000467286 SLC44A5Q8NCS7 719 aa16.75■□□□□ 0.27
CRAMP1-205ENST00000467286 ARHGEF10LQ9HCE6 1279 aa16.75■□□□□ 0.27
CRAMP1-205ENST00000467286 ECHDC1Q9NTX5 307 aa16.75■□□□□ 0.27
CRAMP1-205ENST00000467286 SPDYE16A6NNV3 312 aaPredicted RBP16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 PRKAB2O43741 272 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 EVI5O60447 810 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 CNMDO75829 334 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 TRIM32Q13049 653 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 SLFNL1Q499Z3 407 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 MORN1Q5T089 497 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 MAP3K21Q5TCX8 1036 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 WDR78Q5VTH9 848 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 CHRDL2Q6WN34 429 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 USP6NLQ92738 828 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 TANGO6Q9C0B7 1094 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 SLC4A4Q9Y6R1 1079 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 IVNS1ABPQ9Y6Y0 642 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 SZT2Q5T011 3432 aa16.74■□□□□ 0.27
CRAMP1-205ENST00000467286 COL11A1P12107 1806 aaPredicted RBP16.73■□□□□ 0.27
CRAMP1-205ENST00000467286 ICA1Q05084 483 aa16.73■□□□□ 0.27
CRAMP1-205ENST00000467286 C12orf60Q5U649 245 aa16.73■□□□□ 0.27
CRAMP1-205ENST00000467286 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms