RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 TGFBRAP1Q8WUH2 860 aa13.15□□□□□ -0.31
HPS1-208ENST00000467246 PHF20Q9BVI0 1012 aa13.15□□□□□ -0.31
HPS1-208ENST00000467246 FBXO2Q9UK22 296 aaPredicted RBP13.15□□□□□ -0.31
HPS1-208ENST00000467246 CCDC88AQ3V6T2 1871 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 BAZ2BQ9UIF8 2168 aaKnown RBP13.14□□□□□ -0.31
HPS1-208ENST00000467246 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 PTPREP23469 700 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 TFAP4Q01664 338 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 C15orf52Q6ZUT6 534 aaKnown RBP13.14□□□□□ -0.31
HPS1-208ENST00000467246 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 VEGFAP15692 232 aaPredicted RBP13.14□□□□□ -0.31
HPS1-208ENST00000467246 XBP1P17861 261 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
HPS1-208ENST00000467246 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 METTL16Q86W50 562 aaKnown RBP13.14□□□□□ -0.31
HPS1-208ENST00000467246 PROM2Q8N271 834 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
HPS1-208ENST00000467246 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
HPS1-208ENST00000467246 SPTLC3Q9NUV7 552 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 TUBE1Q9UJT0 475 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 GGA1Q9UJY5 639 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 CNTNAP5Q8WYK1 1306 aa13.14□□□□□ -0.31
HPS1-208ENST00000467246 KIAA1551Q9HCM1 1747 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 MAST2Q6P0Q8 1798 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 FOXN1O15353 648 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 DNTTIP2Q5QJE6 756 aaKnown RBP13.13□□□□□ -0.31
HPS1-208ENST00000467246 FOXP4Q8IVH2 680 aaPredicted RBP13.13□□□□□ -0.31
HPS1-208ENST00000467246 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 POLLQ9UGP5 575 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 BAG3O95817 575 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 CDC25BP30305 580 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 KRT2P35908 639 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 PLCD1P51178 756 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 PPP4CP60510 307 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 GSTO1P78417 241 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 NPY5RQ15761 445 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 KRT27Q7Z3Y8 459 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 MAPKAPK5Q8IW41 473 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 CNNM3Q8NE01 707 aa13.13□□□□□ -0.31
HPS1-208ENST00000467246 SAP30BPQ9UHR5 308 aaKnown RBP13.13□□□□□ -0.31
HPS1-208ENST00000467246 POLRMTO00411 1230 aaKnown RBP13.12□□□□□ -0.31
HPS1-208ENST00000467246 WNT7AO00755 349 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 MYH6P13533 1939 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 ATP2B4P23634 1241 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 BPIFA3Q9BQP9 254 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
HPS1-208ENST00000467246 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 BBOX1O75936 387 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 NCAPHQ15003 741 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 CACTINQ8WUQ7 758 aaKnown RBP13.12□□□□□ -0.31
HPS1-208ENST00000467246 MKNK2Q9HBH9 465 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 SRPRBQ9Y5M8 271 aaKnown RBP13.12□□□□□ -0.31
HPS1-208ENST00000467246 LAMB1P07942 1786 aa13.12□□□□□ -0.31
HPS1-208ENST00000467246 IL1R1P14778 569 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 BTDP43251 543 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 TBC1D16Q8TBP0 767 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 DLEC1Q9Y238 1755 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 TRIM75PA6NK02 468 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 ADAMTS3O15072 1205 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 POLR2DO15514 142 aaKnown RBP13.11□□□□□ -0.31
HPS1-208ENST00000467246 LDHCP07864 332 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
HPS1-208ENST00000467246 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
HPS1-208ENST00000467246 CSRNP2Q9H175 543 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 KAT14Q9H8E8 782 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 PCDHA5Q9Y5H7 936 aa13.11□□□□□ -0.31
HPS1-208ENST00000467246 C6orf229H3BNL8 230 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
HPS1-208ENST00000467246 MFSD14BQ5SR56 506 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 STAG2Q8N3U4 1231 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 PDILTQ8N807 584 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 TNFRSF25Q93038 417 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 CEP131Q9UPN4 1083 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 SCG2P13521 617 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 FILIP1Q7Z7B0 1213 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 PNMA1Q8ND90 353 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 SERTAD1Q9UHV2 236 aa13.1□□□□□ -0.31
HPS1-208ENST00000467246 TERF1P54274 439 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 ZNF444Q8N0Y2 327 aaPredicted RBP13.09□□□□□ -0.31
HPS1-208ENST00000467246 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
HPS1-208ENST00000467246 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 GPR75-ASB3A0A0A6YYF3 556 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 IGSF3O75054 1194 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 TSPY3P0CV98 308 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 TSPY8P0CW00 308 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 BMP6P22004 513 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 LMOD1P29536 600 aaPredicted RBP13.09□□□□□ -0.31
HPS1-208ENST00000467246 ZNF174Q15697 407 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 PFKFB3Q16875 520 aaPredicted RBP13.09□□□□□ -0.31
HPS1-208ENST00000467246 AMOTL1Q8IY63 956 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 GRAMD1CQ8IYS0 662 aa13.09□□□□□ -0.31
HPS1-208ENST00000467246 CRAMP1Q96RY5 1269 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms