RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 INTS4Q96HW7 963 aaKnown RBP8.07□□□□□ -1.12
XRN1-206ENST00000467077 C19orf44Q9H6X5 657 aa8.07□□□□□ -1.12
XRN1-206ENST00000467077 CYP8B1Q9UNU6 501 aa8.07□□□□□ -1.12
XRN1-206ENST00000467077 MYOCOSA0A1B0GUC4 107 aa8.06□□□□□ -1.12
XRN1-206ENST00000467077 TRIM13O60858 407 aa8.06□□□□□ -1.12
XRN1-206ENST00000467077 FBXO24O75426 580 aa8.06□□□□□ -1.12
XRN1-206ENST00000467077 TPP2P29144 1249 aaPredicted RBP8.06□□□□□ -1.12
XRN1-206ENST00000467077 INPP5AQ14642 412 aa8.06□□□□□ -1.12
XRN1-206ENST00000467077 C3orf58Q8NDZ4 430 aa8.06□□□□□ -1.12
XRN1-206ENST00000467077 RBCK1Q9BYM8 510 aa8.06□□□□□ -1.12
XRN1-206ENST00000467077 ARID3CA6NKF2 412 aa8.05□□□□□ -1.12
XRN1-206ENST00000467077 CST3P01034 146 aaPredicted RBP8.05□□□□□ -1.12
XRN1-206ENST00000467077 CELA3BP08861 270 aa8.05□□□□□ -1.12
XRN1-206ENST00000467077 DHX38Q92620 1227 aaKnown RBP8.05□□□□□ -1.12
XRN1-206ENST00000467077 DUSP13Q9UII6 198 aa8.05□□□□□ -1.12
XRN1-206ENST00000467077 ETV3P41162 512 aa8.04□□□□□ -1.12
XRN1-206ENST00000467077 EGR3Q06889 387 aa8.04□□□□□ -1.12
XRN1-206ENST00000467077 WIPI1Q5MNZ9 446 aaPredicted RBP8.04□□□□□ -1.12
XRN1-206ENST00000467077 PCNX4Q63HM2 1172 aa8.04□□□□□ -1.12
XRN1-206ENST00000467077 CDH24Q86UP0 819 aa8.04□□□□□ -1.12
XRN1-206ENST00000467077 SRCIN1Q9C0H9 1055 aa8.04□□□□□ -1.12
XRN1-206ENST00000467077 PNMA6FA0A0J9YX94 578 aa8.03□□□□□ -1.12
XRN1-206ENST00000467077 LTKP29376 864 aa8.03□□□□□ -1.12
XRN1-206ENST00000467077 SKOR2Q2VWA4 1001 aaPredicted RBP8.03□□□□□ -1.12
XRN1-206ENST00000467077 GPATCH2Q9NW75 528 aa8.03□□□□□ -1.12
XRN1-206ENST00000467077 YBX2Q9Y2T7 364 aaKnown RBP8.03□□□□□ -1.12
XRN1-206ENST00000467077 SNCAIPQ9Y6H5 919 aa8.03□□□□□ -1.12
XRN1-206ENST00000467077 ADRB1P08588 477 aa8.02□□□□□ -1.13
XRN1-206ENST00000467077 ZGLP1P0C6A0 271 aa8.02□□□□□ -1.13
XRN1-206ENST00000467077 RASIP1Q5U651 963 aa8.02□□□□□ -1.13
XRN1-206ENST00000467077 CCDC82Q8N4S0 544 aa8.02□□□□□ -1.13
XRN1-206ENST00000467077 ZNF552Q9H707 407 aaPredicted RBP8.02□□□□□ -1.13
XRN1-206ENST00000467077 GPR160Q9UJ42 338 aa8.02□□□□□ -1.13
XRN1-206ENST00000467077 USTQ9Y2C2 406 aa8.02□□□□□ -1.13
XRN1-206ENST00000467077 NR0B2Q15466 257 aa8.01□□□□□ -1.13
XRN1-206ENST00000467077 SPPL2CQ8IUH8 684 aa8.01□□□□□ -1.13
XRN1-206ENST00000467077 SGPP1Q9BX95 441 aa8.01□□□□□ -1.13
XRN1-206ENST00000467077 SP110Q9HB58 689 aa8.01□□□□□ -1.13
XRN1-206ENST00000467077 IRAK3Q9Y616 596 aa8.01□□□□□ -1.13
XRN1-206ENST00000467077 WASH4PA8MWX3 477 aa8□□□□□ -1.13
XRN1-206ENST00000467077 PI3P19957 117 aa8□□□□□ -1.13
XRN1-206ENST00000467077 GRK4P32298 578 aa8□□□□□ -1.13
XRN1-206ENST00000467077 CHRNEQ04844 493 aa8□□□□□ -1.13
XRN1-206ENST00000467077 SSPNQ14714 243 aa8□□□□□ -1.13
XRN1-206ENST00000467077 GAB4Q2WGN9 574 aa8□□□□□ -1.13
XRN1-206ENST00000467077 TIGD5Q53EQ6 642 aa8□□□□□ -1.13
XRN1-206ENST00000467077 GGNQ86UU5 652 aa8□□□□□ -1.13
XRN1-206ENST00000467077 GCM1Q9NP62 436 aa8□□□□□ -1.13
XRN1-206ENST00000467077 ADAMTS20P59510 1910 aa7.99□□□□□ -1.13
XRN1-206ENST00000467077 CELA3AP09093 270 aa7.99□□□□□ -1.13
XRN1-206ENST00000467077 DUSP4Q13115 394 aa7.99□□□□□ -1.13
XRN1-206ENST00000467077 XYLT2Q9H1B5 865 aa7.99□□□□□ -1.13
XRN1-206ENST00000467077 OTOL1A6NHN0 477 aaPredicted RBP7.98□□□□□ -1.13
XRN1-206ENST00000467077 AFF3P51826 1226 aaKnown RBP7.98□□□□□ -1.13
XRN1-206ENST00000467077 SNX17Q15036 470 aa7.98□□□□□ -1.13
XRN1-206ENST00000467077 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.98□□□□□ -1.13
XRN1-206ENST00000467077 TMC7Q7Z402 723 aa7.98□□□□□ -1.13
XRN1-206ENST00000467077 PPP1R13LQ8WUF5 828 aa7.98□□□□□ -1.13
XRN1-206ENST00000467077 SIGLEC10Q96LC7 697 aa7.98□□□□□ -1.13
XRN1-206ENST00000467077 DPH2Q9BQC3 489 aaPredicted RBP7.98□□□□□ -1.13
XRN1-206ENST00000467077 DUSP15Q9H1R2 295 aaPredicted RBP7.98□□□□□ -1.13
XRN1-206ENST00000467077 TMPRSS5Q9H3S3 457 aa7.98□□□□□ -1.13
XRN1-206ENST00000467077 OR14I1A6ND48 311 aa7.97□□□□□ -1.13
XRN1-206ENST00000467077 LMNB1P20700 586 aa7.97□□□□□ -1.13
XRN1-206ENST00000467077 KRTAP10-2P60368 255 aa7.97□□□□□ -1.13
XRN1-206ENST00000467077 NFKB2Q00653 900 aa7.97□□□□□ -1.13
XRN1-206ENST00000467077 PTPN11Q06124 597 aaPredicted RBP7.97□□□□□ -1.13
XRN1-206ENST00000467077 SP8Q8IXZ3 490 aa7.97□□□□□ -1.13
XRN1-206ENST00000467077 GAL3ST3Q96A11 431 aa7.97□□□□□ -1.13
XRN1-206ENST00000467077 Q96M66 194 aa7.97□□□□□ -1.13
XRN1-206ENST00000467077 KCNH3Q9ULD8 1083 aa7.97□□□□□ -1.13
XRN1-206ENST00000467077 ENOX2Q16206 610 aaKnown RBP7.96□□□□□ -1.14
XRN1-206ENST00000467077 TSPYL5Q86VY4 417 aaPredicted RBP7.96□□□□□ -1.14
XRN1-206ENST00000467077 ANKS4BQ8N8V4 417 aa7.96□□□□□ -1.14
XRN1-206ENST00000467077 ANKRD24Q8TF21 1146 aa7.96□□□□□ -1.14
XRN1-206ENST00000467077 GPR62Q9BZJ7 368 aa7.96□□□□□ -1.14
XRN1-206ENST00000467077 PCDHA11Q9Y5I1 949 aa7.96□□□□□ -1.14
XRN1-206ENST00000467077 MRPL41Q8IXM3 137 aaKnown RBP7.95□□□□□ -1.14
XRN1-206ENST00000467077 FEZF2Q8TBJ5 459 aa7.95□□□□□ -1.14
XRN1-206ENST00000467077 SIRT5Q9NXA8 310 aa7.95□□□□□ -1.14
XRN1-206ENST00000467077 PGRP06401 933 aa7.94□□□□□ -1.14
XRN1-206ENST00000467077 ADGRF1Q5T601 910 aa7.94□□□□□ -1.14
XRN1-206ENST00000467077 FBF1Q8TES7 1133 aa7.94□□□□□ -1.14
XRN1-206ENST00000467077 SRSF3P84103 164 aaKnown RBP7.93□□□□□ -1.14
XRN1-206ENST00000467077 PLCB3Q01970 1234 aa7.93□□□□□ -1.14
XRN1-206ENST00000467077 SLC6A19Q695T7 634 aa7.93□□□□□ -1.14
XRN1-206ENST00000467077 DTWD2Q8NBA8 298 aa7.93□□□□□ -1.14
XRN1-206ENST00000467077 TMEM87BQ96K49 555 aa7.93□□□□□ -1.14
XRN1-206ENST00000467077 TACC3Q9Y6A5 838 aa7.93□□□□□ -1.14
XRN1-206ENST00000467077 SLC22A31A6NKX4 558 aa7.92□□□□□ -1.14
XRN1-206ENST00000467077 GIPC1O14908 333 aa7.92□□□□□ -1.14
XRN1-206ENST00000467077 CDK8P49336 464 aa7.92□□□□□ -1.14
XRN1-206ENST00000467077 SPATS1Q496A3 300 aa7.92□□□□□ -1.14
XRN1-206ENST00000467077 ZDHHC14Q8IZN3 488 aa7.92□□□□□ -1.14
XRN1-206ENST00000467077 DACT3Q96B18 629 aaPredicted RBP7.92□□□□□ -1.14
XRN1-206ENST00000467077 TJP2Q9UDY2 1190 aa7.92□□□□□ -1.14
XRN1-206ENST00000467077 MBD1Q9UIS9 605 aaPredicted RBP7.92□□□□□ -1.14
XRN1-206ENST00000467077 DCTN4Q9UJW0 460 aa7.92□□□□□ -1.14
XRN1-206ENST00000467077 RBAK-RBAKDNI3L0D1 243 aa7.91□□□□□ -1.14
XRN1-206ENST00000467077 PSPNO60542 156 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms