RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 PODNQ7Z5L7 613 aa23.63■■□□□ 1.37
CCDC78-207ENST00000466708 PHF20Q9BVI0 1012 aa23.63■■□□□ 1.37
CCDC78-207ENST00000466708 RGS17Q9UGC6 210 aaPredicted RBP23.63■■□□□ 1.37
CCDC78-207ENST00000466708 CNTNAP5Q8WYK1 1306 aa23.62■■□□□ 1.37
CCDC78-207ENST00000466708 MYH1P12882 1939 aa23.62■■□□□ 1.37
CCDC78-207ENST00000466708 RASA1P20936 1047 aa23.62■■□□□ 1.37
CCDC78-207ENST00000466708 NDUFA8P51970 172 aa23.62■■□□□ 1.37
CCDC78-207ENST00000466708 SRBD1Q8N5C6 995 aaKnown RBP23.62■■□□□ 1.37
CCDC78-207ENST00000466708 CDK8P49336 464 aa23.61■■□□□ 1.37
CCDC78-207ENST00000466708 ANO6Q4KMQ2 910 aa23.61■■□□□ 1.37
CCDC78-207ENST00000466708 PNMA1Q8ND90 353 aa23.61■■□□□ 1.37
CCDC78-207ENST00000466708 BRMS1Q9HCU9 246 aa23.61■■□□□ 1.37
CCDC78-207ENST00000466708 CUTAO60888 179 aa23.61■■□□□ 1.37
CCDC78-207ENST00000466708 WDHD1O75717 1129 aaPredicted RBP23.61■■□□□ 1.37
CCDC78-207ENST00000466708 MARCKSP29966 332 aaPredicted RBP23.61■■□□□ 1.37
CCDC78-207ENST00000466708 GNAQP50148 359 aa23.61■■□□□ 1.37
CCDC78-207ENST00000466708 EZH2Q15910 746 aaKnown RBP23.61■■□□□ 1.37
CCDC78-207ENST00000466708 POTEAQ6S8J7 498 aa23.61■■□□□ 1.37
CCDC78-207ENST00000466708 CERS5Q8N5B7 392 aa23.61■■□□□ 1.37
CCDC78-207ENST00000466708 FBXW7Q969H0 707 aa23.61■■□□□ 1.37
CCDC78-207ENST00000466708 ANO8Q9HCE9 1232 aaPredicted RBP23.61■■□□□ 1.37
CCDC78-207ENST00000466708 USP25Q9UHP3 1055 aa23.61■■□□□ 1.37
CCDC78-207ENST00000466708 KRT2P35908 639 aa23.6■■□□□ 1.37
CCDC78-207ENST00000466708 DOK7Q18PE1 504 aa23.6■■□□□ 1.37
CCDC78-207ENST00000466708 HHIPL2Q6UWX4 724 aa23.6■■□□□ 1.37
CCDC78-207ENST00000466708 CNKSR1Q969H4 720 aa23.6■■□□□ 1.37
CCDC78-207ENST00000466708 SDF4Q9BRK5 362 aa23.6■■□□□ 1.37
CCDC78-207ENST00000466708 VPS54Q9P1Q0 977 aa23.6■■□□□ 1.37
CCDC78-207ENST00000466708 CCDC39Q9UFE4 941 aa23.6■■□□□ 1.37
CCDC78-207ENST00000466708 TTF2Q9UNY4 1162 aaKnown RBP23.6■■□□□ 1.37
CCDC78-207ENST00000466708 CEP131Q9UPN4 1083 aa23.6■■□□□ 1.37
CCDC78-207ENST00000466708 FAM237AA0A1B0GTK4 181 aa23.59■■□□□ 1.37
CCDC78-207ENST00000466708 NR5A1Q13285 461 aa23.59■■□□□ 1.37
CCDC78-207ENST00000466708 TIGD1Q96MW7 591 aa23.59■■□□□ 1.37
CCDC78-207ENST00000466708 RTN4Q9NQC3 1192 aaKnown RBP23.59■■□□□ 1.37
CCDC78-207ENST00000466708 TOB1P50616 345 aaPredicted RBP23.59■■□□□ 1.37
CCDC78-207ENST00000466708 EN1Q05925 392 aaPredicted RBP23.59■■□□□ 1.37
CCDC78-207ENST00000466708 STX1AQ16623 288 aa23.59■■□□□ 1.37
CCDC78-207ENST00000466708 SLC44A5Q8NCS7 719 aa23.59■■□□□ 1.37
CCDC78-207ENST00000466708 NEDD1Q8NHV4 660 aa23.59■■□□□ 1.37
CCDC78-207ENST00000466708 RRAGDQ9NQL2 400 aaPredicted RBP23.59■■□□□ 1.37
CCDC78-207ENST00000466708 MORC2Q9Y6X9 1032 aaPredicted RBP23.59■■□□□ 1.37
CCDC78-207ENST00000466708 USP17L3A6NCW0 530 aa23.58■■□□□ 1.37
CCDC78-207ENST00000466708 USP17L4A6NCW7 530 aa23.58■■□□□ 1.37
CCDC78-207ENST00000466708 ZNF202O95125 648 aa23.58■■□□□ 1.37
CCDC78-207ENST00000466708 SCG2P13521 617 aa23.58■■□□□ 1.37
CCDC78-207ENST00000466708 PFKFB1P16118 471 aa23.58■■□□□ 1.37
CCDC78-207ENST00000466708 FKBP1AP62942 108 aaKnown RBP23.58■■□□□ 1.37
CCDC78-207ENST00000466708 GRM4Q14833 912 aa23.58■■□□□ 1.37
CCDC78-207ENST00000466708 USP17L1Q7RTZ2 530 aa23.58■■□□□ 1.37
CCDC78-207ENST00000466708 ZSCAN30Q86W11 494 aa23.58■■□□□ 1.37
CCDC78-207ENST00000466708 CBX8Q9HC52 389 aa23.58■■□□□ 1.37
CCDC78-207ENST00000466708 ADCY5O95622 1261 aa23.57■■□□□ 1.36
CCDC78-207ENST00000466708 PFKFB3Q16875 520 aaPredicted RBP23.57■■□□□ 1.36
CCDC78-207ENST00000466708 RESP18Q5W5W9 173 aa23.57■■□□□ 1.36
CCDC78-207ENST00000466708 KRI1Q8N9T8 703 aaKnown RBP23.57■■□□□ 1.36
CCDC78-207ENST00000466708 OXER1Q8TDS5 423 aa23.57■■□□□ 1.36
CCDC78-207ENST00000466708 HPSEQ9Y251 543 aa23.57■■□□□ 1.36
CCDC78-207ENST00000466708 SNED1Q8TER0 1413 aa23.57■■□□□ 1.36
CCDC78-207ENST00000466708 ZNF165P49910 485 aa23.56■■□□□ 1.36
CCDC78-207ENST00000466708 SHISA4Q96DD7 197 aa23.56■■□□□ 1.36
CCDC78-207ENST00000466708 MRIQ9BWK5 157 aa23.56■■□□□ 1.36
CCDC78-207ENST00000466708 ANO10Q9NW15 660 aa23.56■■□□□ 1.36
CCDC78-207ENST00000466708 F8W031 263 aaPredicted RBP23.56■■□□□ 1.36
CCDC78-207ENST00000466708 CC2D2BQ6DHV5 1058 aa23.56■■□□□ 1.36
CCDC78-207ENST00000466708 TEKT1Q969V4 418 aa23.56■■□□□ 1.36
CCDC78-207ENST00000466708 LZTS2Q9BRK4 669 aa23.56■■□□□ 1.36
CCDC78-207ENST00000466708 CABP5Q9NP86 173 aa23.56■■□□□ 1.36
CCDC78-207ENST00000466708 hCG_1642624A0A1W2PR95 340 aa23.55■■□□□ 1.36
CCDC78-207ENST00000466708 SYKP43405 635 aa23.55■■□□□ 1.36
CCDC78-207ENST00000466708 SHC4Q6S5L8 630 aa23.55■■□□□ 1.36
CCDC78-207ENST00000466708 TMEM47Q9BQJ4 181 aa23.55■■□□□ 1.36
CCDC78-207ENST00000466708 DNAJC25Q9H1X3 360 aa23.55■■□□□ 1.36
CCDC78-207ENST00000466708 SH3GLB2Q9NR46 395 aa23.55■■□□□ 1.36
CCDC78-207ENST00000466708 STX8Q9UNK0 236 aa23.55■■□□□ 1.36
CCDC78-207ENST00000466708 SLX4Q8IY92 1834 aa23.55■■□□□ 1.36
CCDC78-207ENST00000466708 STRIP1Q5VSL9 837 aa23.54■■□□□ 1.36
CCDC78-207ENST00000466708 KIAA1468Q9P260 1216 aa23.54■■□□□ 1.36
CCDC78-207ENST00000466708 MAD2L2Q9UI95 211 aa23.54■■□□□ 1.36
CCDC78-207ENST00000466708 NOL7Q9UMY1 257 aaKnown RBP23.54■■□□□ 1.36
CCDC78-207ENST00000466708 BMP15O95972 392 aa23.54■■□□□ 1.36
CCDC78-207ENST00000466708 PTPREP23469 700 aa23.54■■□□□ 1.36
CCDC78-207ENST00000466708 CLCN1P35523 988 aa23.54■■□□□ 1.36
CCDC78-207ENST00000466708 LUZP1Q86V48 1076 aa23.54■■□□□ 1.36
CCDC78-207ENST00000466708 FAM177A1Q8N128 213 aaPredicted RBP23.54■■□□□ 1.36
CCDC78-207ENST00000466708 ZNF579Q8NAF0 562 aaKnown RBP23.54■■□□□ 1.36
CCDC78-207ENST00000466708 USP40Q9NVE5 1235 aa23.54■■□□□ 1.36
CCDC78-207ENST00000466708 TRIM75PA6NK02 468 aa23.53■■□□□ 1.36
CCDC78-207ENST00000466708 CALML3P27482 149 aa23.53■■□□□ 1.36
CCDC78-207ENST00000466708 NOVP48745 357 aa23.53■■□□□ 1.36
CCDC78-207ENST00000466708 HDLBPQ00341 1268 aaKnown RBP23.53■■□□□ 1.36
CCDC78-207ENST00000466708 GABPAQ06546 454 aa23.53■■□□□ 1.36
CCDC78-207ENST00000466708 DBNDD1Q9H9R9 158 aa23.53■■□□□ 1.36
CCDC78-207ENST00000466708 PCDHB6Q9Y5E3 794 aa23.53■■□□□ 1.36
CCDC78-207ENST00000466708 PLIN4Q96Q06 1357 aa23.53■■□□□ 1.36
CCDC78-207ENST00000466708 PALM3A6NDB9 673 aaPredicted RBP23.52■■□□□ 1.36
CCDC78-207ENST00000466708 PTMAP06454 111 aaKnown RBP23.52■■□□□ 1.36
CCDC78-207ENST00000466708 NPY5RQ15761 445 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 C7orf43Q8WVR3 580 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 TNFRSF25Q93038 417 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms