RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 hCG_1642624A0A1W2PR95 340 aa21.1■□□□□ 0.97
COL9A3-205ENST00000466192 BTBD18B2RXH4 712 aa21.1■□□□□ 0.97
COL9A3-205ENST00000466192 SF3A1Q15459 793 aaKnown RBP21.1■□□□□ 0.97
COL9A3-205ENST00000466192 CCDC73Q6ZRK6 1079 aa21.1■□□□□ 0.97
COL9A3-205ENST00000466192 RBM43Q6ZSC3 357 aaKnown RBP21.1■□□□□ 0.97
COL9A3-205ENST00000466192 CTCFLQ8NI51 663 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-205ENST00000466192 KCNG4Q8TDN1 519 aa21.1■□□□□ 0.97
COL9A3-205ENST00000466192 TCP11L1Q9NUJ3 509 aa21.1■□□□□ 0.97
COL9A3-205ENST00000466192 SPTLC2O15270 562 aa21.1■□□□□ 0.97
COL9A3-205ENST00000466192 AKAP17AQ02040 695 aaKnown RBP21.1■□□□□ 0.97
COL9A3-205ENST00000466192 ADALQ6DHV7 355 aa21.1■□□□□ 0.97
COL9A3-205ENST00000466192 DIS3L2Q8IYB7 885 aaKnown RBP21.1■□□□□ 0.97
COL9A3-205ENST00000466192 SRBD1Q8N5C6 995 aaKnown RBP21.1■□□□□ 0.97
COL9A3-205ENST00000466192 MRVI1Q9Y6F6 885 aa21.1■□□□□ 0.97
COL9A3-205ENST00000466192 V9GY48 417 aaPredicted RBP21.1■□□□□ 0.97
COL9A3-205ENST00000466192 SNW1Q13573 536 aaKnown RBP21.09■□□□□ 0.97
COL9A3-205ENST00000466192 FSIP1Q8NA03 581 aa21.09■□□□□ 0.97
COL9A3-205ENST00000466192 KAT14Q9H8E8 782 aa21.09■□□□□ 0.97
COL9A3-205ENST00000466192 ZNF287Q9HBT7 754 aa21.09■□□□□ 0.97
COL9A3-205ENST00000466192 CNTNAP5Q8WYK1 1306 aa21.09■□□□□ 0.97
COL9A3-205ENST00000466192 ECE2O60344 883 aa21.09■□□□□ 0.97
COL9A3-205ENST00000466192 WDHD1O75717 1129 aaPredicted RBP21.09■□□□□ 0.97
COL9A3-205ENST00000466192 PICALMQ13492 652 aa21.09■□□□□ 0.97
COL9A3-205ENST00000466192 SAFBQ15424 915 aaKnown RBP eCLIP21.09■□□□□ 0.97
COL9A3-205ENST00000466192 NOSTRINQ8IVI9 506 aa21.09■□□□□ 0.97
COL9A3-205ENST00000466192 PNMA1Q8ND90 353 aa21.09■□□□□ 0.97
COL9A3-205ENST00000466192 DDX4Q9NQI0 724 aaKnown RBP21.09■□□□□ 0.97
COL9A3-205ENST00000466192 C10orf71Q711Q0 1435 aa21.08■□□□□ 0.97
COL9A3-205ENST00000466192 FAM160A1Q05DH4 1040 aa21.08■□□□□ 0.97
COL9A3-205ENST00000466192 HHIPL2Q6UWX4 724 aa21.08■□□□□ 0.97
COL9A3-205ENST00000466192 ENGASEQ8NFI3 743 aa21.08■□□□□ 0.97
COL9A3-205ENST00000466192 MAP3K14Q99558 947 aa21.08■□□□□ 0.97
COL9A3-205ENST00000466192 SLC39A14Q15043 492 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 CCDC178Q5BJE1 867 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 TEKT1Q969V4 418 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 FOXP1Q9H334 677 aaPredicted RBP21.07■□□□□ 0.96
COL9A3-205ENST00000466192 USP40Q9NVE5 1235 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 VPS54Q9P1Q0 977 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 A0A1W2PQ27 194 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 A0A1W2PQ64 194 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 A0A1W2PQD8 194 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 AOC3Q16853 763 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 DACT2Q5SW24 774 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 STRIP1Q5VSL9 837 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 APOBEC3HQ6NTF7 200 aaKnown RBP21.07■□□□□ 0.96
COL9A3-205ENST00000466192 SASS6Q6UVJ0 657 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 OXER1Q8TDS5 423 aa21.07■□□□□ 0.96
COL9A3-205ENST00000466192 MRPS27Q92552 414 aaKnown RBP21.07■□□□□ 0.96
COL9A3-205ENST00000466192 A0A1B0GVL5 298 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 KINO60870 393 aaKnown RBP21.06■□□□□ 0.96
COL9A3-205ENST00000466192 PLCB2Q00722 1185 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 NR5A1Q13285 461 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 PTPAQ15257 358 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 ANO6Q4KMQ2 910 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 CDC42EP5Q6NZY7 148 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.06■□□□□ 0.96
COL9A3-205ENST00000466192 CRKP46108 304 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 AXDND1Q5T1B0 1012 aaPredicted RBP21.06■□□□□ 0.96
COL9A3-205ENST00000466192 KIAA0825Q8IV33 1275 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 NEDD1Q8NHV4 660 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 FAM200AQ8TCP9 573 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 STX8Q9UNK0 236 aa21.06■□□□□ 0.96
COL9A3-205ENST00000466192 C21orf2O43822 256 aa21.05■□□□□ 0.96
COL9A3-205ENST00000466192 KIF5BP33176 963 aa21.05■□□□□ 0.96
COL9A3-205ENST00000466192 TOB1P50616 345 aaPredicted RBP21.05■□□□□ 0.96
COL9A3-205ENST00000466192 HS1BP3Q53T59 392 aa21.05■□□□□ 0.96
COL9A3-205ENST00000466192 ZSCAN30Q86W11 494 aa21.05■□□□□ 0.96
COL9A3-205ENST00000466192 TMEM47Q9BQJ4 181 aa21.05■□□□□ 0.96
COL9A3-205ENST00000466192 PHF20Q9BVI0 1012 aa21.05■□□□□ 0.96
COL9A3-205ENST00000466192 ADCY5O95622 1261 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 MARCKSP29966 332 aaPredicted RBP21.04■□□□□ 0.96
COL9A3-205ENST00000466192 FKBP1AP62942 108 aaKnown RBP21.04■□□□□ 0.96
COL9A3-205ENST00000466192 KIAA2012Q0VF49 1180 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 CC2D2BQ6DHV5 1058 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 XBP1P17861 261 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 CLCN1P35523 988 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 NDUFA8P51970 172 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 GABPAQ06546 454 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 GRM4Q14833 912 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 FMR1NBQ8N0W7 255 aaPredicted RBP21.04■□□□□ 0.96
COL9A3-205ENST00000466192 STAG2Q8N3U4 1231 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 PCDHAC2Q9Y5I4 1007 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 PSME4Q14997 1843 aa21.04■□□□□ 0.96
COL9A3-205ENST00000466192 CTAGE5O15320 804 aa21.03■□□□□ 0.96
COL9A3-205ENST00000466192 LUZP1Q86V48 1076 aa21.03■□□□□ 0.96
COL9A3-205ENST00000466192 ZDHHC15Q96MV8 337 aa21.03■□□□□ 0.96
COL9A3-205ENST00000466192 PPP6R2O75170 966 aa21.03■□□□□ 0.96
COL9A3-205ENST00000466192 MAD2L2Q9UI95 211 aa21.03■□□□□ 0.96
COL9A3-205ENST00000466192 KIF13BQ9NQT8 1826 aa21.03■□□□□ 0.96
COL9A3-205ENST00000466192 VEGFAP15692 232 aaPredicted RBP21.02■□□□□ 0.96
COL9A3-205ENST00000466192 NFIAQ12857 509 aa21.02■□□□□ 0.96
COL9A3-205ENST00000466192 OSBPL5Q9H0X9 879 aaPredicted RBP21.02■□□□□ 0.96
COL9A3-205ENST00000466192 DNAJC25Q9H1X3 360 aa21.02■□□□□ 0.96
COL9A3-205ENST00000466192 CCDC39Q9UFE4 941 aa21.02■□□□□ 0.96
COL9A3-205ENST00000466192 PTMAP06454 111 aaKnown RBP21.02■□□□□ 0.95
COL9A3-205ENST00000466192 SCG2P13521 617 aa21.02■□□□□ 0.95
COL9A3-205ENST00000466192 TTLL6Q8N841 843 aa21.02■□□□□ 0.95
COL9A3-205ENST00000466192 PIBF1Q8WXW3 757 aa21.02■□□□□ 0.95
COL9A3-205ENST00000466192 CEP95Q96GE4 821 aa21.02■□□□□ 0.95
COL9A3-205ENST00000466192 MRIQ9BWK5 157 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms