RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 MFSD6Q6ZSS7 791 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 RUFY3Q7L099 469 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 KIAA0825Q8IV33 1275 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 TEX11Q8IYF3 940 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 LCORLQ8N3X6 602 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 CERS5Q8N5B7 392 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 MIGA1Q8NAN2 632 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 STAG1Q8WVM7 1258 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 DCP1AQ9NPI6 582 aaPredicted RBP7.1□□□□□ -1.27
CHMP3-206ENST00000466032 SWAP70Q9UH65 585 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 DAGLAQ9Y4D2 1042 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 SNX14Q9Y5W7 946 aa7.1□□□□□ -1.27
CHMP3-206ENST00000466032 COL2A1P02458 1487 aaPredicted RBP7.1□□□□□ -1.27
CHMP3-206ENST00000466032 ERICH2A1L162 156 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 ORC4O43929 436 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 RAD17O75943 681 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 POLR3DP05423 398 aaPredicted RBP7.09□□□□□ -1.27
CHMP3-206ENST00000466032 FGRP09769 529 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 SMPD1P17405 629 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 LMOD1P29536 600 aaPredicted RBP7.09□□□□□ -1.27
CHMP3-206ENST00000466032 NEK4P51957 841 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 RCAN1P53805 252 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 RHBDL3P58872 404 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 ZNF280AP59817 542 aaPredicted RBP7.09□□□□□ -1.27
CHMP3-206ENST00000466032 PPARAQ07869 468 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 PPP2R5BQ15173 497 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 DIXDC1Q155Q3 683 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 CFAP100Q494V2 611 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 CCDC129Q6ZRS4 1044 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 DHX32Q7L7V1 743 aaKnown RBP7.09□□□□□ -1.27
CHMP3-206ENST00000466032 FAM83AQ86UY5 434 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 FOXP4Q8IVH2 680 aaPredicted RBP7.09□□□□□ -1.27
CHMP3-206ENST00000466032 ZNF384Q8TF68 577 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 ESR2Q92731 530 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 TMEM87BQ96K49 555 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 IPO9Q96P70 1041 aaKnown RBP7.09□□□□□ -1.27
CHMP3-206ENST00000466032 EHD4Q9H223 541 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 IL25Q9H293 177 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 SH2B1Q9NRF2 756 aaPredicted RBP7.09□□□□□ -1.27
CHMP3-206ENST00000466032 USP40Q9NVE5 1235 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 MCM9Q9NXL9 1143 aa7.09□□□□□ -1.27
CHMP3-206ENST00000466032 MKRN1Q9UHC7 482 aaKnown RBP7.09□□□□□ -1.27
CHMP3-206ENST00000466032 ROBO3Q96MS0 1386 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 MYH2Q9UKX2 1941 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 DICER1Q9UPY3 1922 aaKnown RBP7.08□□□□□ -1.28
CHMP3-206ENST00000466032 IQCA1LA6NCM1 817 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 E7EWF7 191 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 CASTP20810 708 aaKnown RBP7.08□□□□□ -1.28
CHMP3-206ENST00000466032 RPS6KB1P23443 525 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 DYNLL1P63167 89 aaKnown RBP7.08□□□□□ -1.28
CHMP3-206ENST00000466032 FGD1P98174 961 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 C12orf60Q5U649 245 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 APOBEC3HQ6NTF7 200 aaKnown RBP7.08□□□□□ -1.28
CHMP3-206ENST00000466032 CTR9Q6PD62 1173 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 ADGRA1Q86SQ6 560 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 IQCA1Q86XH1 822 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 TGFBRAP1Q8WUH2 860 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 CCDC17Q96LX7 622 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 JAKMIP1Q96N16 626 aaKnown RBP7.08□□□□□ -1.28
CHMP3-206ENST00000466032 KIF2CQ99661 725 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 KRTAP4-9Q9BYQ8 210 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 MYOZ2Q9NPC6 264 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 GINM1Q9NU53 330 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 PDRG1Q9NUG6 133 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 RNF181Q9P0P0 153 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 PI4KBQ9UBF8 816 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 HERC5Q9UII4 1024 aaKnown RBP7.08□□□□□ -1.28
CHMP3-206ENST00000466032 JAG2Q9Y219 1238 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 PPP2R3BQ9Y5P8 575 aa7.08□□□□□ -1.28
CHMP3-206ENST00000466032 FLT1P17948 1338 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 USP17L12C9JPN9 530 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 USP17L21D6R901 530 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 F8W031 263 aaPredicted RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 K7ELQ4 463 aaPredicted RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 DHX16O60231 1041 aaKnown RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 LIFRP42702 1097 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 SCNN1DP51172 638 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 PPP1R15BQ5SWA1 713 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 CDC42EP5Q6NZY7 148 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 SYNE3Q6ZMZ3 975 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 APOBEC3FQ8IUX4 373 aaKnown RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 ZNF444Q8N0Y2 327 aaPredicted RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 SH3RF3Q8TEJ3 882 aaPredicted RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 ZC3H15Q8WU90 426 aaKnown RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 SDR42E1Q8WUS8 393 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 FAM151AQ8WW52 585 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 INTS4Q96HW7 963 aaKnown RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 ZBED3Q96IU2 234 aaPredicted RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 TTC14Q96N46 770 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 TRIM34Q9BYJ4 488 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 OSBPL5Q9H0X9 879 aaPredicted RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 MKNK2Q9HBH9 465 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 CWC22Q9HCG8 908 aaKnown RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 KCNQ5Q9NR82 932 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 TCP11L1Q9NUJ3 509 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 CNOT7Q9UIV1 285 aaKnown RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 SERPINB13Q9UIV8 391 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 LIMCH1Q9UPQ0 1083 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 KIF3AQ9Y496 699 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms