RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TNPO2O14787 897 aaKnown RBP26.19■■□□□ 1.78
LIME1-203ENST00000465591 GLRX3O76003 335 aaKnown RBP26.19■■□□□ 1.78
LIME1-203ENST00000465591 EN2P19622 333 aaPredicted RBP26.19■■□□□ 1.78
LIME1-203ENST00000465591 CTR9Q6PD62 1173 aa26.19■■□□□ 1.78
LIME1-203ENST00000465591 EXOC6Q8TAG9 804 aa26.19■■□□□ 1.78
LIME1-203ENST00000465591 KIAA1683Q9H0B3 1180 aa26.19■■□□□ 1.78
LIME1-203ENST00000465591 TXNRD2Q9NNW7 524 aa26.19■■□□□ 1.78
LIME1-203ENST00000465591 SWAP70Q9UH65 585 aa26.19■■□□□ 1.78
LIME1-203ENST00000465591 A0A1W2PRG0 241 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 GSG1L2A8MUP6 293 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 MPHOSPH10O00566 681 aaKnown RBP26.18■■□□□ 1.78
LIME1-203ENST00000465591 ERC2O15083 957 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 AKR1B1P15121 316 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 FLT3LGP49771 235 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 HERVK_113P62684 666 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 MTFR1Q15390 333 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 CLEC10AQ8IUN9 316 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 GCC1Q96CN9 775 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 MORF4L1Q9UBU8 362 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 PLXNB2O15031 1838 aa26.18■■□□□ 1.78
LIME1-203ENST00000465591 GRK4P32298 578 aa26.17■■□□□ 1.78
LIME1-203ENST00000465591 CDK8P49336 464 aa26.17■■□□□ 1.78
LIME1-203ENST00000465591 MKI67P46013 3256 aaKnown RBP26.16■■□□□ 1.78
LIME1-203ENST00000465591 GPAA1O43292 621 aa26.16■■□□□ 1.78
LIME1-203ENST00000465591 ZFYP08048 801 aaPredicted RBP26.16■■□□□ 1.78
LIME1-203ENST00000465591 VCAM1P19320 739 aa26.16■■□□□ 1.78
LIME1-203ENST00000465591 C16orf86Q6ZW13 317 aa26.16■■□□□ 1.78
LIME1-203ENST00000465591 SEC62Q99442 399 aaKnown RBP26.16■■□□□ 1.78
LIME1-203ENST00000465591 EPB41L4AQ9HCS5 686 aaPredicted RBP26.16■■□□□ 1.78
LIME1-203ENST00000465591 RBPJLQ9UBG7 517 aa26.16■■□□□ 1.78
LIME1-203ENST00000465591 SIAH1Q8IUQ4 282 aa26.15■■□□□ 1.78
LIME1-203ENST00000465591 TMEM106CQ9BVX2 250 aa26.15■■□□□ 1.78
LIME1-203ENST00000465591 USP14P54578 494 aa26.14■■□□□ 1.78
LIME1-203ENST00000465591 TMEM179Q6ZVK1 233 aa26.14■■□□□ 1.78
LIME1-203ENST00000465591 DDRGK1Q96HY6 314 aa26.14■■□□□ 1.78
LIME1-203ENST00000465591 FSD1Q9BTV5 496 aa26.14■■□□□ 1.78
LIME1-203ENST00000465591 STAP2Q9UGK3 403 aa26.14■■□□□ 1.78
LIME1-203ENST00000465591 TAOK2Q9UL54 1235 aa26.14■■□□□ 1.78
LIME1-203ENST00000465591 IGHDP01880 384 aa26.13■■□□□ 1.77
LIME1-203ENST00000465591 ELNP15502 786 aa26.13■■□□□ 1.77
LIME1-203ENST00000465591 AAMPQ13685 434 aa26.13■■□□□ 1.77
LIME1-203ENST00000465591 Q3C1V9 767 aa26.13■■□□□ 1.77
LIME1-203ENST00000465591 KIAA1755Q5JYT7 1200 aa26.13■■□□□ 1.77
LIME1-203ENST00000465591 COA7Q96BR5 231 aa26.13■■□□□ 1.77
LIME1-203ENST00000465591 ARPP21Q9UBL0 812 aaPredicted RBP26.13■■□□□ 1.77
LIME1-203ENST00000465591 SUPT16HQ9Y5B9 1047 aaKnown RBP26.13■■□□□ 1.77
LIME1-203ENST00000465591 RLFQ13129 1914 aa26.13■■□□□ 1.77
LIME1-203ENST00000465591 GREB1LQ9C091 1923 aaPredicted RBP26.13■■□□□ 1.77
LIME1-203ENST00000465591 USP17L15C9J2P7 530 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 USP17L13C9JLJ4 530 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 USP17L11C9JVI0 530 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 USP17L18D6R9N7 530 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 USP17L22D6RA61 530 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 USP17L17D6RBQ6 530 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 USP17L19D6RCP7 530 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 USP17L20D6RJB6 530 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 ADCY3O60266 1144 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 PDE1AP54750 535 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 USP17L24Q0WX57 530 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 IRF5Q13568 498 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 SBK1Q52WX2 424 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 CATSPERGQ6ZRH7 1159 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 SMC5Q8IY18 1101 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 AMOTL1Q8IY63 956 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 SLAIN1Q8ND83 568 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 ZBTB47Q9UFB7 747 aaPredicted RBP26.12■■□□□ 1.77
LIME1-203ENST00000465591 GJD2Q9UKL4 321 aa26.12■■□□□ 1.77
LIME1-203ENST00000465591 CNMDO75829 334 aa26.11■■□□□ 1.77
LIME1-203ENST00000465591 ZMYM1Q5SVZ6 1142 aa26.11■■□□□ 1.77
LIME1-203ENST00000465591 GIMAP6Q6P9H5 292 aa26.11■■□□□ 1.77
LIME1-203ENST00000465591 STK11IPQ8N1F8 1099 aa26.11■■□□□ 1.77
LIME1-203ENST00000465591 GPRC5AQ8NFJ5 357 aa26.11■■□□□ 1.77
LIME1-203ENST00000465591 PAGR1Q9BTK6 254 aa26.11■■□□□ 1.77
LIME1-203ENST00000465591 LNPKQ9C0E8 428 aa26.11■■□□□ 1.77
LIME1-203ENST00000465591 RPAP3Q9H6T3 665 aaPredicted RBP26.11■■□□□ 1.77
LIME1-203ENST00000465591 ERVK-9P63128 1117 aa26.1■■□□□ 1.77
LIME1-203ENST00000465591 ERVK-24P63145 666 aa26.1■■□□□ 1.77
LIME1-203ENST00000465591 CCDC17Q96LX7 622 aa26.1■■□□□ 1.77
LIME1-203ENST00000465591 PORCNQ9H237 461 aa26.1■■□□□ 1.77
LIME1-203ENST00000465591 BIN2Q9UBW5 565 aaPredicted RBP26.1■■□□□ 1.77
LIME1-203ENST00000465591 MINDY4BA8MYZ0 360 aa26.09■■□□□ 1.77
LIME1-203ENST00000465591 CCL5P13501 91 aa26.09■■□□□ 1.77
LIME1-203ENST00000465591 ICA1Q05084 483 aa26.09■■□□□ 1.77
LIME1-203ENST00000465591 B4GALNT3Q6L9W6 998 aa26.09■■□□□ 1.77
LIME1-203ENST00000465591 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.09■■□□□ 1.77
LIME1-203ENST00000465591 ROBO3Q96MS0 1386 aa26.08■■□□□ 1.77
LIME1-203ENST00000465591 LRRFIP1Q32MZ4 808 aaKnown RBP26.08■■□□□ 1.77
LIME1-203ENST00000465591 PXYLP1Q8TE99 480 aa26.08■■□□□ 1.77
LIME1-203ENST00000465591 SHISA4Q96DD7 197 aa26.08■■□□□ 1.77
LIME1-203ENST00000465591 RWDD1Q9H446 243 aaPredicted RBP26.08■■□□□ 1.77
LIME1-203ENST00000465591 PARP14Q460N5 1801 aa26.08■■□□□ 1.77
LIME1-203ENST00000465591 SPDYE16A6NNV3 312 aaPredicted RBP26.07■■□□□ 1.76
LIME1-203ENST00000465591 PATL2C9JE40 543 aaKnown RBP26.07■■□□□ 1.76
LIME1-203ENST00000465591 INHAP05111 366 aa26.07■■□□□ 1.76
LIME1-203ENST00000465591 GNAT2P19087 354 aa26.07■■□□□ 1.76
LIME1-203ENST00000465591 RASA1P20936 1047 aa26.07■■□□□ 1.76
LIME1-203ENST00000465591 CCDC129Q6ZRS4 1044 aa26.07■■□□□ 1.76
LIME1-203ENST00000465591 IFNL3Q8IZI9 196 aa26.07■■□□□ 1.76
LIME1-203ENST00000465591 GTF3C2Q8WUA4 911 aaPredicted RBP26.07■■□□□ 1.76
LIME1-203ENST00000465591 UNC93B1Q9H1C4 597 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms