RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 ZYXQ15942 572 aaKnown RBP14.99□□□□□ -0.01
CNKSR1-203ENST00000465415 USP17L2Q6R6M4 530 aa14.99□□□□□ -0.01
CNKSR1-203ENST00000465415 CENPQQ7L2Z9 268 aaPredicted RBP14.99□□□□□ -0.01
CNKSR1-203ENST00000465415 STK11IPQ8N1F8 1099 aa14.99□□□□□ -0.01
CNKSR1-203ENST00000465415 CCDC17Q96LX7 622 aa14.99□□□□□ -0.01
CNKSR1-203ENST00000465415 MYH8P13535 1937 aa14.99□□□□□ -0.01
CNKSR1-203ENST00000465415 CCDC171Q6TFL3 1326 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 HIP1O00291 1037 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 FOXP2O15409 715 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 PKN2Q16513 984 aaKnown RBP14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 VPS53Q5VIR6 699 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 C17orf99Q6UX52 265 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 ZNF589Q86UQ0 364 aaPredicted RBP14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 ACER1Q8TDN7 264 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 ABHD8Q96I13 439 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 KIAA1683Q9H0B3 1180 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 MKNK2Q9HBH9 465 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 ZNF287Q9HBT7 754 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 TRIM17Q9Y577 477 aa14.98□□□□□ -0.01
CNKSR1-203ENST00000465415 SLC3A2P08195 630 aaKnown RBP14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 OSBPP22059 807 aa14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 USP14P54578 494 aa14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 MFAP1P55081 439 aaKnown RBP14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 IRX3P78415 501 aaPredicted RBP14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 LACTBP83111 547 aaPredicted RBP14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 ICA1Q05084 483 aa14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 PPARAQ07869 468 aa14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 KIF22Q14807 665 aa14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 OTOP1Q7RTM1 612 aa14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 CLEC10AQ8IUN9 316 aa14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 C12orf42Q96LP6 360 aa14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 EMILIN3Q9NT22 766 aa14.97□□□□□ -0.01
CNKSR1-203ENST00000465415 BCRP11274 1271 aa14.96□□□□□ -0.01
CNKSR1-203ENST00000465415 RASA1P20936 1047 aa14.96□□□□□ -0.01
CNKSR1-203ENST00000465415 ARHGEF6Q15052 776 aa14.96□□□□□ -0.01
CNKSR1-203ENST00000465415 CWC27Q6UX04 472 aaKnown RBP14.96□□□□□ -0.01
CNKSR1-203ENST00000465415 ASCC2Q9H1I8 757 aaPredicted RBP14.96□□□□□ -0.01
CNKSR1-203ENST00000465415 EFCC1Q9HA90 598 aa14.96□□□□□ -0.01
CNKSR1-203ENST00000465415 ARHGEF10LQ9HCE6 1279 aa14.96□□□□□ -0.01
CNKSR1-203ENST00000465415 A0A1W2PRG0 241 aa14.95□□□□□ -0.02
CNKSR1-203ENST00000465415 PRDM1O75626 825 aa14.95□□□□□ -0.02
CNKSR1-203ENST00000465415 HSPD1P10809 573 aaKnown RBP14.95□□□□□ -0.02
CNKSR1-203ENST00000465415 VCAM1P19320 739 aa14.95□□□□□ -0.02
CNKSR1-203ENST00000465415 HOXA7P31268 230 aaPredicted RBP14.95□□□□□ -0.02
CNKSR1-203ENST00000465415 CAP1Q01518 475 aa14.95□□□□□ -0.02
CNKSR1-203ENST00000465415 PDE4BQ07343 736 aa14.95□□□□□ -0.02
CNKSR1-203ENST00000465415 FBXO46Q6PJ61 603 aaPredicted RBP14.95□□□□□ -0.02
CNKSR1-203ENST00000465415 CCDC136Q96JN2 1154 aa14.95□□□□□ -0.02
CNKSR1-203ENST00000465415 SH2D4AQ9H788 454 aa14.95□□□□□ -0.02
CNKSR1-203ENST00000465415 ZMYM6O95789 1325 aa14.94□□□□□ -0.02
CNKSR1-203ENST00000465415 GCLCP48506 637 aaPredicted RBP14.94□□□□□ -0.02
CNKSR1-203ENST00000465415 ATP2B2Q01814 1243 aa14.94□□□□□ -0.02
CNKSR1-203ENST00000465415 ALX1Q15699 326 aa14.94□□□□□ -0.02
CNKSR1-203ENST00000465415 ZNF444Q8N0Y2 327 aaPredicted RBP14.94□□□□□ -0.02
CNKSR1-203ENST00000465415 ARHGAP39Q9C0H5 1083 aa14.94□□□□□ -0.02
CNKSR1-203ENST00000465415 KANSL2Q9H9L4 492 aa14.94□□□□□ -0.02
CNKSR1-203ENST00000465415 ECM2O94769 699 aaPredicted RBP14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 EEF2P13639 858 aaKnown RBP14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 HERVK_113P62684 666 aa14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 FAM110CQ1W6H9 321 aa14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 ANKRD13CQ8N6S4 541 aa14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 ANAPC4Q9UJX5 808 aa14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 HPS5Q9UPZ3 1129 aa14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 TMX2Q9Y320 296 aa14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 ZSWIM8A7E2V4 1837 aa14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 GREB1LQ9C091 1923 aaPredicted RBP14.93□□□□□ -0.02
CNKSR1-203ENST00000465415 USP17L15C9J2P7 530 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 USP17L13C9JLJ4 530 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 USP17L11C9JVI0 530 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 USP17L18D6R9N7 530 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 USP17L22D6RA61 530 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 USP17L17D6RBQ6 530 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 USP17L19D6RCP7 530 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 USP17L20D6RJB6 530 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 FMNL1O95466 1100 aaPredicted RBP14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 GNRH1P01148 92 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 FGAP02671 866 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 TSPY3P0CV98 308 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 TSPY8P0CW00 308 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 PSMC4P43686 418 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 FCGRTP55899 365 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 CTDSPL2Q05D32 466 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 USP17L24Q0WX57 530 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 SIAH1Q8IUQ4 282 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 LPAR1Q92633 364 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 TRIM47Q96LD4 638 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 P2RX7Q99572 595 aaKnown RBP14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 RPAP3Q9H6T3 665 aaPredicted RBP14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 VCPKMTQ9H867 229 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 PTPN22Q9Y2R2 807 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 PLIN4Q96Q06 1357 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 RAD50Q92878 1312 aa14.92□□□□□ -0.02
CNKSR1-203ENST00000465415 CTGFP29279 349 aa14.91□□□□□ -0.02
CNKSR1-203ENST00000465415 GTF3C2Q8WUA4 911 aaPredicted RBP14.91□□□□□ -0.02
CNKSR1-203ENST00000465415 TANGO6Q9C0B7 1094 aa14.91□□□□□ -0.02
CNKSR1-203ENST00000465415 HTTP42858 3142 aa14.9□□□□□ -0.02
CNKSR1-203ENST00000465415 IGKV6D-41A0A0C4DH26 115 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms