RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 DDX60LQ5H9U9 1706 aaKnown RBP18.01■□□□□ 0.47
MRPL55-225ENST00000465268 VCAM1P19320 739 aa18■□□□□ 0.47
MRPL55-225ENST00000465268 KIAA1755Q5JYT7 1200 aa18■□□□□ 0.47
MRPL55-225ENST00000465268 CLEC10AQ8IUN9 316 aa18■□□□□ 0.47
MRPL55-225ENST00000465268 OTUD7AQ8TE49 926 aaPredicted RBP18■□□□□ 0.47
MRPL55-225ENST00000465268 U2AF1L4Q8WU68 220 aaKnown RBP18■□□□□ 0.47
MRPL55-225ENST00000465268 FEZ1Q99689 392 aa18■□□□□ 0.47
MRPL55-225ENST00000465268 KIAA1683Q9H0B3 1180 aa18■□□□□ 0.47
MRPL55-225ENST00000465268 PORCNQ9H237 461 aa18■□□□□ 0.47
MRPL55-225ENST00000465268 ECHDC1Q9NTX5 307 aa18■□□□□ 0.47
MRPL55-225ENST00000465268 RRP1P56182 461 aaKnown RBP17.99■□□□□ 0.47
MRPL55-225ENST00000465268 CATSPERGQ6ZRH7 1159 aa17.99■□□□□ 0.47
MRPL55-225ENST00000465268 SIAH1Q8IUQ4 282 aa17.99■□□□□ 0.47
MRPL55-225ENST00000465268 GPRC5AQ8NFJ5 357 aa17.99■□□□□ 0.47
MRPL55-225ENST00000465268 PAGR1Q9BTK6 254 aa17.99■□□□□ 0.47
MRPL55-225ENST00000465268 CABP5Q9NP86 173 aa17.99■□□□□ 0.47
MRPL55-225ENST00000465268 MPHOSPH10O00566 681 aaKnown RBP17.98■□□□□ 0.47
MRPL55-225ENST00000465268 AKR1B1P15121 316 aa17.98■□□□□ 0.47
MRPL55-225ENST00000465268 ERVK-9P63128 1117 aa17.98■□□□□ 0.47
MRPL55-225ENST00000465268 ERVK-24P63145 666 aa17.98■□□□□ 0.47
MRPL55-225ENST00000465268 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.98■□□□□ 0.47
MRPL55-225ENST00000465268 ATP8A2Q9NTI2 1148 aa17.98■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L15C9J2P7 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L13C9JLJ4 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L12C9JPN9 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L11C9JVI0 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L21D6R901 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L18D6R9N7 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L22D6RA61 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L17D6RBQ6 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L19D6RCP7 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L20D6RJB6 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 SGPL1O95470 568 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 CYP2B6P20813 491 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 USP17L24Q0WX57 530 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 C12orf60Q5U649 245 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 CTR9Q6PD62 1173 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 TRIB2Q92519 343 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 OSBP2Q969R2 916 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 DEFB118Q96PH6 123 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 PAK6Q9NQU5 681 aaPredicted RBP17.97■□□□□ 0.47
MRPL55-225ENST00000465268 BTBD7Q9P203 1132 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 SLC4A4Q9Y6R1 1079 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 MYH1P12882 1939 aa17.97■□□□□ 0.47
MRPL55-225ENST00000465268 CDK8P49336 464 aa17.96■□□□□ 0.47
MRPL55-225ENST00000465268 USP14P54578 494 aa17.96■□□□□ 0.47
MRPL55-225ENST00000465268 NKX2-3Q8TAU0 364 aa17.96■□□□□ 0.47
MRPL55-225ENST00000465268 USP6NLQ92738 828 aa17.96■□□□□ 0.47
MRPL55-225ENST00000465268 STRBPQ96SI9 672 aaKnown RBP17.96■□□□□ 0.47
MRPL55-225ENST00000465268 CRBNQ96SW2 442 aa17.96■□□□□ 0.47
MRPL55-225ENST00000465268 RPAP3Q9H6T3 665 aaPredicted RBP17.96■□□□□ 0.47
MRPL55-225ENST00000465268 MGAMO43451 1857 aa17.96■□□□□ 0.47
MRPL55-225ENST00000465268 GPR142Q7Z601 462 aa17.95■□□□□ 0.46
MRPL55-225ENST00000465268 KBTBD3Q8NAB2 608 aa17.95■□□□□ 0.46
MRPL55-225ENST00000465268 SPDYE16A6NNV3 312 aaPredicted RBP17.94■□□□□ 0.46
MRPL55-225ENST00000465268 H0YGN5 161 aa17.94■□□□□ 0.46
MRPL55-225ENST00000465268 HMGCRP04035 888 aa17.94■□□□□ 0.46
MRPL55-225ENST00000465268 CCL14Q16627 93 aa17.94■□□□□ 0.46
MRPL55-225ENST00000465268 MORN1Q5T089 497 aa17.94■□□□□ 0.46
MRPL55-225ENST00000465268 C16orf86Q6ZW13 317 aa17.94■□□□□ 0.46
MRPL55-225ENST00000465268 PI4K2BQ8TCG2 481 aa17.94■□□□□ 0.46
MRPL55-225ENST00000465268 YTHDC1Q96MU7 727 aaKnown RBP17.94■□□□□ 0.46
MRPL55-225ENST00000465268 CRISPLD2Q9H0B8 497 aa17.94■□□□□ 0.46
MRPL55-225ENST00000465268 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.94■□□□□ 0.46
MRPL55-225ENST00000465268 SWAP70Q9UH65 585 aa17.94■□□□□ 0.46
MRPL55-225ENST00000465268 RABGAP1Q9Y3P9 1069 aa17.94■□□□□ 0.46
MRPL55-225ENST00000465268 NAV1Q8NEY1 1877 aa17.93■□□□□ 0.46
MRPL55-225ENST00000465268 GSG1L2A8MUP6 293 aa17.93■□□□□ 0.46
MRPL55-225ENST00000465268 M0R2C6 588 aa17.93■□□□□ 0.46
MRPL55-225ENST00000465268 MAPK4P31152 587 aa17.93■□□□□ 0.46
MRPL55-225ENST00000465268 ZSCAN25Q6NSZ9 544 aa17.93■□□□□ 0.46
MRPL55-225ENST00000465268 TMEM179Q6ZVK1 233 aa17.93■□□□□ 0.46
MRPL55-225ENST00000465268 PLEKHH3Q7Z736 793 aa17.93■□□□□ 0.46
MRPL55-225ENST00000465268 NUDT12Q9BQG2 462 aa17.93■□□□□ 0.46
MRPL55-225ENST00000465268 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.93■□□□□ 0.46
MRPL55-225ENST00000465268 RNF113AO15541 343 aaKnown RBP17.92■□□□□ 0.46
MRPL55-225ENST00000465268 FARP2O94887 1054 aaPredicted RBP17.92■□□□□ 0.46
MRPL55-225ENST00000465268 TFRCP02786 760 aaKnown RBP17.92■□□□□ 0.46
MRPL55-225ENST00000465268 LBX2Q6XYB7 198 aa17.92■□□□□ 0.46
MRPL55-225ENST00000465268 SPICE1Q8N0Z3 855 aa17.92■□□□□ 0.46
MRPL55-225ENST00000465268 STK11IPQ8N1F8 1099 aa17.92■□□□□ 0.46
MRPL55-225ENST00000465268 DIS3LQ8TF46 1054 aaKnown RBP17.92■□□□□ 0.46
MRPL55-225ENST00000465268 GTF3C2Q8WUA4 911 aaPredicted RBP17.92■□□□□ 0.46
MRPL55-225ENST00000465268 APPBP2Q92624 585 aa17.92■□□□□ 0.46
MRPL55-225ENST00000465268 SEC62Q99442 399 aaKnown RBP17.92■□□□□ 0.46
MRPL55-225ENST00000465268 EPB41L4AQ9HCS5 686 aaPredicted RBP17.92■□□□□ 0.46
MRPL55-225ENST00000465268 DOCK3Q8IZD9 2030 aa17.92■□□□□ 0.46
MRPL55-225ENST00000465268 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
MRPL55-225ENST00000465268 ICA1Q05084 483 aa17.91■□□□□ 0.46
MRPL55-225ENST00000465268 HABP4Q5JVS0 413 aaKnown RBP17.91■□□□□ 0.46
MRPL55-225ENST00000465268 MAP3K21Q5TCX8 1036 aa17.91■□□□□ 0.46
MRPL55-225ENST00000465268 DPF3Q92784 378 aa17.91■□□□□ 0.46
MRPL55-225ENST00000465268 FLRT1Q9NZU1 646 aa17.91■□□□□ 0.46
MRPL55-225ENST00000465268 TMX2Q9Y320 296 aa17.91■□□□□ 0.46
MRPL55-225ENST00000465268 PLXNB2O15031 1838 aa17.91■□□□□ 0.46
MRPL55-225ENST00000465268 XRCC5P13010 732 aaKnown RBP17.9■□□□□ 0.46
MRPL55-225ENST00000465268 SOCS4Q8WXH5 440 aa17.9■□□□□ 0.46
MRPL55-225ENST00000465268 GPATCH3Q96I76 525 aa17.9■□□□□ 0.46
MRPL55-225ENST00000465268 COLQQ9Y215 455 aaPredicted RBP17.9■□□□□ 0.46
MRPL55-225ENST00000465268 RPTORQ8N122 1335 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms