RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 EMILIN3Q9NT22 766 aa18.78■□□□□ 0.6
NCSTN-210ENST00000465223 RABGAP1Q9Y3P9 1069 aa18.78■□□□□ 0.6
NCSTN-210ENST00000465223 BDP1A6H8Y1 2624 aa18.77■□□□□ 0.6
NCSTN-210ENST00000465223 KIAA0355O15063 1070 aa18.77■□□□□ 0.6
NCSTN-210ENST00000465223 MECOMQ03112 1051 aa18.77■□□□□ 0.6
NCSTN-210ENST00000465223 GRB14Q14449 540 aa18.77■□□□□ 0.6
NCSTN-210ENST00000465223 LRRC41Q15345 812 aa18.77■□□□□ 0.6
NCSTN-210ENST00000465223 CCDC129Q6ZRS4 1044 aa18.77■□□□□ 0.6
NCSTN-210ENST00000465223 GDF11O95390 407 aa18.76■□□□□ 0.59
NCSTN-210ENST00000465223 ASNSP08243 561 aa18.76■□□□□ 0.59
NCSTN-210ENST00000465223 CCNA1P78396 465 aa18.76■□□□□ 0.59
NCSTN-210ENST00000465223 TFF2Q03403 129 aa18.76■□□□□ 0.59
NCSTN-210ENST00000465223 RASGRF1Q13972 1273 aa18.76■□□□□ 0.59
NCSTN-210ENST00000465223 PRAMEF19Q5SWL8 479 aa18.76■□□□□ 0.59
NCSTN-210ENST00000465223 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.76■□□□□ 0.59
NCSTN-210ENST00000465223 SIL1Q9H173 461 aa18.76■□□□□ 0.59
NCSTN-210ENST00000465223 HERC5Q9UII4 1024 aaKnown RBP18.76■□□□□ 0.59
NCSTN-210ENST00000465223 IVNS1ABPQ9Y6Y0 642 aa18.76■□□□□ 0.59
NCSTN-210ENST00000465223 SEPT4O43236 478 aa18.75■□□□□ 0.59
NCSTN-210ENST00000465223 PQBP1O60828 265 aaKnown RBP18.75■□□□□ 0.59
NCSTN-210ENST00000465223 FAM47AQ5JRC9 791 aa18.75■□□□□ 0.59
NCSTN-210ENST00000465223 CCDC102BQ68D86 513 aa18.75■□□□□ 0.59
NCSTN-210ENST00000465223 BTBD7Q9P203 1132 aa18.75■□□□□ 0.59
NCSTN-210ENST00000465223 GBF1Q92538 1859 aa18.74■□□□□ 0.59
NCSTN-210ENST00000465223 KCNQ1P51787 676 aa18.74■□□□□ 0.59
NCSTN-210ENST00000465223 DNAJC18Q9H819 358 aa18.74■□□□□ 0.59
NCSTN-210ENST00000465223 TMEM39AQ9NV64 488 aa18.74■□□□□ 0.59
NCSTN-210ENST00000465223 CXXC1Q9P0U4 656 aaPredicted RBP18.74■□□□□ 0.59
NCSTN-210ENST00000465223 SMCHD1A6NHR9 2005 aa18.74■□□□□ 0.59
NCSTN-210ENST00000465223 ZYXQ15942 572 aaKnown RBP18.73■□□□□ 0.59
NCSTN-210ENST00000465223 TMEM31Q5JXX7 168 aa18.73■□□□□ 0.59
NCSTN-210ENST00000465223 SPTY2D1Q68D10 685 aaPredicted RBP18.73■□□□□ 0.59
NCSTN-210ENST00000465223 USP17L2Q6R6M4 530 aa18.73■□□□□ 0.59
NCSTN-210ENST00000465223 ERICH6Q7L0X2 663 aa18.73■□□□□ 0.59
NCSTN-210ENST00000465223 DPP9Q86TI2 863 aa18.73■□□□□ 0.59
NCSTN-210ENST00000465223 SNX27Q96L92 541 aa18.73■□□□□ 0.59
NCSTN-210ENST00000465223 CEP126Q9P2H0 1117 aa18.73■□□□□ 0.59
NCSTN-210ENST00000465223 PI4KBQ9UBF8 816 aa18.73■□□□□ 0.59
NCSTN-210ENST00000465223 PHF24Q9UPV7 400 aa18.73■□□□□ 0.59
NCSTN-210ENST00000465223 OLFML2BQ68BL8 750 aa18.72■□□□□ 0.59
NCSTN-210ENST00000465223 TEX11Q8IYF3 940 aa18.72■□□□□ 0.59
NCSTN-210ENST00000465223 ZBTB21Q9ULJ3 1066 aa18.72■□□□□ 0.59
NCSTN-210ENST00000465223 USP17L15C9J2P7 530 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 USP17L13C9JLJ4 530 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 USP17L11C9JVI0 530 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 USP17L18D6R9N7 530 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 USP17L22D6RA61 530 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 USP17L17D6RBQ6 530 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 USP17L19D6RCP7 530 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 USP17L20D6RJB6 530 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 FAAP100Q0VG06 881 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 USP17L24Q0WX57 530 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 C16orf59Q7L2K0 433 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 MICALL1Q8N3F8 863 aa18.71■□□□□ 0.59
NCSTN-210ENST00000465223 PRKRIP1Q9H875 184 aaPredicted RBP18.71■□□□□ 0.59
NCSTN-210ENST00000465223 ZNF236Q9UL36 1845 aa18.7■□□□□ 0.58
NCSTN-210ENST00000465223 FAM86C2PA6NEL3 165 aa18.7■□□□□ 0.58
NCSTN-210ENST00000465223 ADORA2AP29274 412 aa18.7■□□□□ 0.58
NCSTN-210ENST00000465223 CATSPERGQ6ZRH7 1159 aa18.7■□□□□ 0.58
NCSTN-210ENST00000465223 SLC44A5Q8NCS7 719 aa18.7■□□□□ 0.58
NCSTN-210ENST00000465223 SH3RF3Q8TEJ3 882 aaPredicted RBP18.7■□□□□ 0.58
NCSTN-210ENST00000465223 USP44Q9H0E7 712 aa18.7■□□□□ 0.58
NCSTN-210ENST00000465223 TSPYL2Q9H2G4 693 aaPredicted RBP18.7■□□□□ 0.58
NCSTN-210ENST00000465223 C11orf16Q9NQ32 467 aa18.7■□□□□ 0.58
NCSTN-210ENST00000465223 CDK5RAP2Q96SN8 1893 aa18.69■□□□□ 0.58
NCSTN-210ENST00000465223 A0A1W2PQ45 241 aaPredicted RBP18.69■□□□□ 0.58
NCSTN-210ENST00000465223 A0A1W2PQY0 241 aa18.69■□□□□ 0.58
NCSTN-210ENST00000465223 ZBTB22O15209 634 aa18.69■□□□□ 0.58
NCSTN-210ENST00000465223 COBLO75128 1261 aa18.69■□□□□ 0.58
NCSTN-210ENST00000465223 TMEM240Q5SV17 173 aa18.69■□□□□ 0.58
NCSTN-210ENST00000465223 KHSRPQ92945 711 aaKnown RBP eCLIP18.69■□□□□ 0.58
NCSTN-210ENST00000465223 NSUN4Q96CB9 384 aaKnown RBP18.69■□□□□ 0.58
NCSTN-210ENST00000465223 C12orf42Q96LP6 360 aa18.69■□□□□ 0.58
NCSTN-210ENST00000465223 NKX2-4Q9H2Z4 354 aa18.69■□□□□ 0.58
NCSTN-210ENST00000465223 SALL2Q9Y467 1007 aaPredicted RBP18.69■□□□□ 0.58
NCSTN-210ENST00000465223 PDS5AQ29RF7 1337 aaKnown RBP18.69■□□□□ 0.58
NCSTN-210ENST00000465223 CIAO1O76071 339 aa18.68■□□□□ 0.58
NCSTN-210ENST00000465223 MAP4K4O95819 1239 aaPredicted RBP18.68■□□□□ 0.58
NCSTN-210ENST00000465223 PGK1P00558 417 aa18.68■□□□□ 0.58
NCSTN-210ENST00000465223 LDHCP07864 332 aa18.68■□□□□ 0.58
NCSTN-210ENST00000465223 TIMM10P62072 90 aa18.68■□□□□ 0.58
NCSTN-210ENST00000465223 RASIP1Q5U651 963 aa18.68■□□□□ 0.58
NCSTN-210ENST00000465223 TBC1D9Q6ZT07 1266 aa18.68■□□□□ 0.58
NCSTN-210ENST00000465223 CRACR2BQ8N4Y2 399 aaPredicted RBP18.68■□□□□ 0.58
NCSTN-210ENST00000465223 SPDYE16A6NNV3 312 aaPredicted RBP18.67■□□□□ 0.58
NCSTN-210ENST00000465223 TIMP1P01033 207 aa18.67■□□□□ 0.58
NCSTN-210ENST00000465223 ACRP10323 421 aa18.67■□□□□ 0.58
NCSTN-210ENST00000465223 FEZ1Q99689 392 aa18.67■□□□□ 0.58
NCSTN-210ENST00000465223 DHX36Q9H2U1 1008 aaKnown RBP18.67■□□□□ 0.58
NCSTN-210ENST00000465223 XPNPEP3Q9NQH7 507 aa18.67■□□□□ 0.58
NCSTN-210ENST00000465223 REV3LO60673 3130 aa18.66■□□□□ 0.58
NCSTN-210ENST00000465223 CHD9Q3L8U1 2897 aa18.66■□□□□ 0.58
NCSTN-210ENST00000465223 GSTO1P78417 241 aa18.66■□□□□ 0.58
NCSTN-210ENST00000465223 MFSD5Q6N075 450 aa18.66■□□□□ 0.58
NCSTN-210ENST00000465223 PI16Q6UXB8 463 aa18.66■□□□□ 0.58
NCSTN-210ENST00000465223 LBX2Q6XYB7 198 aa18.66■□□□□ 0.58
NCSTN-210ENST00000465223 MAPKAPK5Q8IW41 473 aa18.66■□□□□ 0.58
NCSTN-210ENST00000465223 MOV10L1Q9BXT6 1211 aaKnown RBP18.66■□□□□ 0.58
NCSTN-210ENST00000465223 TRIM34Q9BYJ4 488 aa18.66■□□□□ 0.58
NCSTN-210ENST00000465223 GINM1Q9NU53 330 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms