RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 ANO6Q4KMQ2 910 aa11.35□□□□□ -0.59
ATF3-207ENST00000464547 ZNF444Q8N0Y2 327 aaPredicted RBP11.35□□□□□ -0.59
ATF3-207ENST00000464547 CAMKK2Q96RR4 588 aa11.35□□□□□ -0.59
ATF3-207ENST00000464547 TMX4Q9H1E5 349 aaPredicted RBP11.35□□□□□ -0.59
ATF3-207ENST00000464547 KAT14Q9H8E8 782 aa11.35□□□□□ -0.59
ATF3-207ENST00000464547 CBX8Q9HC52 389 aa11.35□□□□□ -0.59
ATF3-207ENST00000464547 VPS54Q9P1Q0 977 aa11.35□□□□□ -0.59
ATF3-207ENST00000464547 USP25Q9UHP3 1055 aa11.35□□□□□ -0.59
ATF3-207ENST00000464547 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
ATF3-207ENST00000464547 FLT1P17948 1338 aa11.35□□□□□ -0.59
ATF3-207ENST00000464547 FAM237AA0A1B0GTK4 181 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 USP17L3A6NCW0 530 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 USP17L4A6NCW7 530 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 H0YIN7 160 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 AP5Z1O43299 807 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 CUTAO60888 179 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 ADCY5O95622 1261 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 TSPY3P0CV98 308 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 TSPY8P0CW00 308 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 PFKFB1P16118 471 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 CDK8P49336 464 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 EN1Q05925 392 aaPredicted RBP11.34□□□□□ -0.59
ATF3-207ENST00000464547 NR5A1Q13285 461 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 GRM4Q14833 912 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 SLC15A2Q16348 729 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 C16orf86Q6ZW13 317 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 USP17L1Q7RTZ2 530 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 EYA3Q99504 573 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 PHF20Q9BVI0 1012 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 MXD3Q9BW11 206 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.34□□□□□ -0.59
ATF3-207ENST00000464547 STK32BQ9NY57 414 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 QSER1Q2KHR3 1735 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 CDK5RAP2Q96SN8 1893 aa11.34□□□□□ -0.59
ATF3-207ENST00000464547 F8W031 263 aaPredicted RBP11.33□□□□□ -0.6
ATF3-207ENST00000464547 XBP1P17861 261 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 KIF5BP33176 963 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 KRT2P35908 639 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 RILPL1Q5EBL4 403 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 RESP18Q5W5W9 173 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 SHC4Q6S5L8 630 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 NEDD1Q8NHV4 660 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 DNAJC25Q9H1X3 360 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 ZNF287Q9HBT7 754 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 CCDC39Q9UFE4 941 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 TTF2Q9UNY4 1162 aaKnown RBP11.33□□□□□ -0.6
ATF3-207ENST00000464547 HPSEQ9Y251 543 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 SNED1Q8TER0 1413 aa11.33□□□□□ -0.6
ATF3-207ENST00000464547 FAM205CA6NFA0 338 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 G3V3G9 751 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 ZNF202O95125 648 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 SCG2P13521 617 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 CHRNA5P30532 468 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 NPY5RQ15761 445 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 STX1AQ16623 288 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 PFKFB3Q16875 520 aaPredicted RBP11.32□□□□□ -0.6
ATF3-207ENST00000464547 DCAF8Q5TAQ9 597 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 LUZP1Q86V48 1076 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 ZSCAN30Q86W11 494 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 TNFRSF25Q93038 417 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 TIGD1Q96MW7 591 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 CLIC6Q96NY7 704 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 TMEM47Q9BQJ4 181 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 SDF4Q9BRK5 362 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 CABP5Q9NP86 173 aa11.32□□□□□ -0.6
ATF3-207ENST00000464547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
ATF3-207ENST00000464547 CAVIN2O95810 425 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 ZNF165P49910 485 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 GNAQP50148 359 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 SLC35G1Q2M3R5 365 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 EARS2Q5JPH6 523 aaKnown RBP11.31□□□□□ -0.6
ATF3-207ENST00000464547 HHIPL2Q6UWX4 724 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 C11orf57Q6ZUT1 292 aaPredicted RBP11.31□□□□□ -0.6
ATF3-207ENST00000464547 PODNQ7Z5L7 613 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 STAG2Q8N3U4 1231 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
ATF3-207ENST00000464547 CNKSR1Q969H4 720 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 KCNQ5Q9NR82 932 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 USP40Q9NVE5 1235 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 ANO10Q9NW15 660 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 MAD2L2Q9UI95 211 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 FBXO2Q9UK22 296 aaPredicted RBP11.31□□□□□ -0.6
ATF3-207ENST00000464547 PCDHB6Q9Y5E3 794 aa11.31□□□□□ -0.6
ATF3-207ENST00000464547 A0A087WWV3 80 aa11.3□□□□□ -0.6
ATF3-207ENST00000464547 PALM3A6NDB9 673 aaPredicted RBP11.3□□□□□ -0.6
ATF3-207ENST00000464547 PTMAP06454 111 aaKnown RBP11.3□□□□□ -0.6
ATF3-207ENST00000464547 VEGFAP15692 232 aaPredicted RBP11.3□□□□□ -0.6
ATF3-207ENST00000464547 ATP2B1P20020 1258 aa11.3□□□□□ -0.6
ATF3-207ENST00000464547 PTPREP23469 700 aa11.3□□□□□ -0.6
ATF3-207ENST00000464547 CLCN1P35523 988 aa11.3□□□□□ -0.6
ATF3-207ENST00000464547 SYKP43405 635 aa11.3□□□□□ -0.6
ATF3-207ENST00000464547 NOVP48745 357 aa11.3□□□□□ -0.6
ATF3-207ENST00000464547 SCNN1DP51172 638 aa11.3□□□□□ -0.6
ATF3-207ENST00000464547 FKBP1AP62942 108 aaKnown RBP11.3□□□□□ -0.6
ATF3-207ENST00000464547 PICALMQ13492 652 aa11.3□□□□□ -0.6
ATF3-207ENST00000464547 IQCB1Q15051 598 aa11.3□□□□□ -0.6
ATF3-207ENST00000464547 APOBEC3HQ6NTF7 200 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms