RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 DIAPH3Q9NSV4 1193 aa20.32■□□□□ 0.84
VPS52-215ENST00000464425 EMILIN3Q9NT22 766 aa20.32■□□□□ 0.84
VPS52-215ENST00000464425 SLC45A1Q9Y2W3 748 aa20.32■□□□□ 0.84
VPS52-215ENST00000464425 ECM2O94769 699 aaPredicted RBP20.31■□□□□ 0.84
VPS52-215ENST00000464425 USP17L2Q6R6M4 530 aa20.31■□□□□ 0.84
VPS52-215ENST00000464425 C17orf99Q6UX52 265 aa20.31■□□□□ 0.84
VPS52-215ENST00000464425 SKAP1Q86WV1 359 aa20.31■□□□□ 0.84
VPS52-215ENST00000464425 CLEC10AQ8IUN9 316 aa20.31■□□□□ 0.84
VPS52-215ENST00000464425 ERO1AQ96HE7 468 aa20.31■□□□□ 0.84
VPS52-215ENST00000464425 CCDC17Q96LX7 622 aa20.31■□□□□ 0.84
VPS52-215ENST00000464425 PTPRFP10586 1907 aa20.31■□□□□ 0.84
VPS52-215ENST00000464425 PRDM1O75626 825 aa20.3■□□□□ 0.84
VPS52-215ENST00000464425 CAP1Q01518 475 aa20.3■□□□□ 0.84
VPS52-215ENST00000464425 PPARAQ07869 468 aa20.3■□□□□ 0.84
VPS52-215ENST00000464425 SMCR8Q8TEV9 937 aaPredicted RBP20.3■□□□□ 0.84
VPS52-215ENST00000464425 CCDC171Q6TFL3 1326 aa20.29■□□□□ 0.84
VPS52-215ENST00000464425 ADGRA2Q96PE1 1338 aa20.29■□□□□ 0.84
VPS52-215ENST00000464425 HIP1O00291 1037 aa20.29■□□□□ 0.84
VPS52-215ENST00000464425 HSPD1P10809 573 aaKnown RBP20.29■□□□□ 0.84
VPS52-215ENST00000464425 RASA1P20936 1047 aa20.29■□□□□ 0.84
VPS52-215ENST00000464425 PABPC4Q13310 644 aaKnown RBP eCLIP20.29■□□□□ 0.84
VPS52-215ENST00000464425 TRIM17Q9Y577 477 aa20.29■□□□□ 0.84
VPS52-215ENST00000464425 A0A1W2PRG0 241 aa20.28■□□□□ 0.84
VPS52-215ENST00000464425 SLC3A2P08195 630 aaKnown RBP20.28■□□□□ 0.84
VPS52-215ENST00000464425 OSBPP22059 807 aa20.28■□□□□ 0.84
VPS52-215ENST00000464425 USP14P54578 494 aa20.28■□□□□ 0.84
VPS52-215ENST00000464425 ATP2B2Q01814 1243 aa20.28■□□□□ 0.84
VPS52-215ENST00000464425 CTDSPL2Q05D32 466 aa20.28■□□□□ 0.84
VPS52-215ENST00000464425 SIAH1Q8IUQ4 282 aa20.28■□□□□ 0.84
VPS52-215ENST00000464425 ZNF444Q8N0Y2 327 aaPredicted RBP20.28■□□□□ 0.84
VPS52-215ENST00000464425 KIAA1683Q9H0B3 1180 aa20.28■□□□□ 0.84
VPS52-215ENST00000464425 ASCC2Q9H1I8 757 aaPredicted RBP20.28■□□□□ 0.84
VPS52-215ENST00000464425 PNMA3Q9UL41 463 aa20.28■□□□□ 0.84
VPS52-215ENST00000464425 ROBO3Q96MS0 1386 aa20.28■□□□□ 0.84
VPS52-215ENST00000464425 FGAP02671 866 aa20.27■□□□□ 0.84
VPS52-215ENST00000464425 MFAP1P55081 439 aaKnown RBP20.27■□□□□ 0.84
VPS52-215ENST00000464425 ICA1Q05084 483 aa20.27■□□□□ 0.84
VPS52-215ENST00000464425 ALX1Q15699 326 aa20.27■□□□□ 0.84
VPS52-215ENST00000464425 OTOP1Q7RTM1 612 aa20.27■□□□□ 0.84
VPS52-215ENST00000464425 ABHD8Q96I13 439 aa20.27■□□□□ 0.84
VPS52-215ENST00000464425 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.27■□□□□ 0.84
VPS52-215ENST00000464425 ARHGAP39Q9C0H5 1083 aa20.27■□□□□ 0.84
VPS52-215ENST00000464425 EFCC1Q9HA90 598 aa20.27■□□□□ 0.84
VPS52-215ENST00000464425 ZNF287Q9HBT7 754 aa20.27■□□□□ 0.84
VPS52-215ENST00000464425 CAPN15O75808 1086 aa20.26■□□□□ 0.83
VPS52-215ENST00000464425 BCRP11274 1271 aa20.26■□□□□ 0.83
VPS52-215ENST00000464425 HOXA7P31268 230 aaPredicted RBP20.26■□□□□ 0.83
VPS52-215ENST00000464425 IRX3P78415 501 aaPredicted RBP20.26■□□□□ 0.83
VPS52-215ENST00000464425 LACTBP83111 547 aaPredicted RBP20.26■□□□□ 0.83
VPS52-215ENST00000464425 PDE4BQ07343 736 aa20.26■□□□□ 0.83
VPS52-215ENST00000464425 KIF22Q14807 665 aa20.26■□□□□ 0.83
VPS52-215ENST00000464425 BMP2KLQ5H9B9 411 aa20.26■□□□□ 0.83
VPS52-215ENST00000464425 P2RX7Q99572 595 aaKnown RBP20.26■□□□□ 0.83
VPS52-215ENST00000464425 KANSL2Q9H9L4 492 aa20.26■□□□□ 0.83
VPS52-215ENST00000464425 INCENPQ9NQS7 918 aa20.26■□□□□ 0.83
VPS52-215ENST00000464425 MYH8P13535 1937 aa20.25■□□□□ 0.83
VPS52-215ENST00000464425 EEF2P13639 858 aaKnown RBP20.25■□□□□ 0.83
VPS52-215ENST00000464425 PKN2Q16513 984 aaKnown RBP20.25■□□□□ 0.83
VPS52-215ENST00000464425 ANKRD13CQ8N6S4 541 aa20.25■□□□□ 0.83
VPS52-215ENST00000464425 C12orf42Q96LP6 360 aa20.25■□□□□ 0.83
VPS52-215ENST00000464425 ARHGEF10LQ9HCE6 1279 aa20.25■□□□□ 0.83
VPS52-215ENST00000464425 LOC285556D6RIA3 1793 aa20.24■□□□□ 0.83
VPS52-215ENST00000464425 VCAM1P19320 739 aa20.24■□□□□ 0.83
VPS52-215ENST00000464425 FAM47AQ5JRC9 791 aa20.24■□□□□ 0.83
VPS52-215ENST00000464425 USP17L15C9J2P7 530 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 USP17L13C9JLJ4 530 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 USP17L11C9JVI0 530 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 USP17L18D6R9N7 530 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 USP17L22D6RA61 530 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 USP17L17D6RBQ6 530 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 USP17L19D6RCP7 530 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 USP17L20D6RJB6 530 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 CHMLP26374 656 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 CTGFP29279 349 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 PSMC4P43686 418 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 HAND2P61296 217 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 USP17L24Q0WX57 530 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 ARHGEF6Q15052 776 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 KIAA1755Q5JYT7 1200 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 IFFO2Q5TF58 517 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 IL25Q9H293 177 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 RPAP3Q9H6T3 665 aaPredicted RBP20.23■□□□□ 0.83
VPS52-215ENST00000464425 ANAPC4Q9UJX5 808 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 TMX2Q9Y320 296 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 TACC3Q9Y6A5 838 aa20.23■□□□□ 0.83
VPS52-215ENST00000464425 PEX10O60683 326 aa20.22■□□□□ 0.83
VPS52-215ENST00000464425 FMNL1O95466 1100 aaPredicted RBP20.22■□□□□ 0.83
VPS52-215ENST00000464425 TSPY3P0CV98 308 aa20.22■□□□□ 0.83
VPS52-215ENST00000464425 TSPY8P0CW00 308 aa20.22■□□□□ 0.83
VPS52-215ENST00000464425 GCLCP48506 637 aaPredicted RBP20.22■□□□□ 0.83
VPS52-215ENST00000464425 TFAP4Q01664 338 aa20.22■□□□□ 0.83
VPS52-215ENST00000464425 FBXO46Q6PJ61 603 aaPredicted RBP20.22■□□□□ 0.83
VPS52-215ENST00000464425 SPICE1Q8N0Z3 855 aa20.22■□□□□ 0.83
VPS52-215ENST00000464425 SH2D4AQ9H788 454 aa20.22■□□□□ 0.83
VPS52-215ENST00000464425 CCDC85CA6NKD9 419 aa20.21■□□□□ 0.83
VPS52-215ENST00000464425 RAD21O60216 631 aa20.21■□□□□ 0.83
VPS52-215ENST00000464425 HERVK_113P62684 666 aa20.21■□□□□ 0.83
VPS52-215ENST00000464425 CATSPERGQ6ZRH7 1159 aa20.21■□□□□ 0.83
VPS52-215ENST00000464425 TRIM47Q96LD4 638 aa20.21■□□□□ 0.83
VPS52-215ENST00000464425 VCPKMTQ9H867 229 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms