RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 GPRC5AQ8NFJ5 357 aa17.6■□□□□ 0.41
ALMS1-202ENST00000464408 DIS3LQ8TF46 1054 aaKnown RBP17.6■□□□□ 0.41
ALMS1-202ENST00000464408 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.6■□□□□ 0.41
ALMS1-202ENST00000464408 CRISPLD2Q9H0B8 497 aa17.6■□□□□ 0.41
ALMS1-202ENST00000464408 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.6■□□□□ 0.41
ALMS1-202ENST00000464408 SMIM22K7EJ46 135 aa17.59■□□□□ 0.41
ALMS1-202ENST00000464408 CNMDO75829 334 aa17.59■□□□□ 0.41
ALMS1-202ENST00000464408 POLR3DP05423 398 aaPredicted RBP17.59■□□□□ 0.41
ALMS1-202ENST00000464408 ERVK-9P63128 1117 aa17.59■□□□□ 0.41
ALMS1-202ENST00000464408 ERVK-24P63145 666 aa17.59■□□□□ 0.41
ALMS1-202ENST00000464408 GABPAQ06546 454 aa17.59■□□□□ 0.41
ALMS1-202ENST00000464408 C12orf42Q96LP6 360 aa17.59■□□□□ 0.41
ALMS1-202ENST00000464408 FEZ1Q99689 392 aa17.59■□□□□ 0.41
ALMS1-202ENST00000464408 CRNKL1Q9BZJ0 848 aaKnown RBP17.59■□□□□ 0.41
ALMS1-202ENST00000464408 BOLA2Q9H3K6 86 aa17.59■□□□□ 0.41
ALMS1-202ENST00000464408 ARMT1Q9H993 441 aa17.59■□□□□ 0.41
ALMS1-202ENST00000464408 MCM9Q9NXL9 1143 aa17.59■□□□□ 0.41
ALMS1-202ENST00000464408 PRKAB2O43741 272 aa17.58■□□□□ 0.4
ALMS1-202ENST00000464408 SMARCA5O60264 1052 aaPredicted RBP17.58■□□□□ 0.4
ALMS1-202ENST00000464408 RAB11FIP3O75154 756 aa17.58■□□□□ 0.4
ALMS1-202ENST00000464408 VCAM1P19320 739 aa17.58■□□□□ 0.4
ALMS1-202ENST00000464408 TMED8Q6PL24 325 aaPredicted RBP17.58■□□□□ 0.4
ALMS1-202ENST00000464408 SLC44A5Q8NCS7 719 aa17.58■□□□□ 0.4
ALMS1-202ENST00000464408 DCP1AQ9NPI6 582 aaPredicted RBP17.58■□□□□ 0.4
ALMS1-202ENST00000464408 PAG1Q9NWQ8 432 aa17.58■□□□□ 0.4
ALMS1-202ENST00000464408 RLFQ13129 1914 aa17.57■□□□□ 0.4
ALMS1-202ENST00000464408 SEPT2Q15019 361 aa17.57■□□□□ 0.4
ALMS1-202ENST00000464408 CCL14Q16627 93 aa17.57■□□□□ 0.4
ALMS1-202ENST00000464408 GPR142Q7Z601 462 aa17.57■□□□□ 0.4
ALMS1-202ENST00000464408 DYNLL2Q96FJ2 89 aa17.57■□□□□ 0.4
ALMS1-202ENST00000464408 PAWRQ96IZ0 340 aaKnown RBP17.57■□□□□ 0.4
ALMS1-202ENST00000464408 HTATIP2Q9BUP3 242 aa17.57■□□□□ 0.4
ALMS1-202ENST00000464408 KIAA1683Q9H0B3 1180 aa17.57■□□□□ 0.4
ALMS1-202ENST00000464408 A0A1W2PRG0 241 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 USP17L15C9J2P7 530 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 USP17L13C9JLJ4 530 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 USP17L11C9JVI0 530 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 USP17L18D6R9N7 530 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 USP17L22D6RA61 530 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 USP17L17D6RBQ6 530 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 USP17L19D6RCP7 530 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 USP17L20D6RJB6 530 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 MBD4O95243 580 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 ATP5JP18859 108 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 ADD2P35612 726 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 MNX1P50219 401 aaPredicted RBP17.56■□□□□ 0.4
ALMS1-202ENST00000464408 USP17L24Q0WX57 530 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 CATSPERGQ6ZRH7 1159 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 CLEC10AQ8IUN9 316 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 USP6NLQ92738 828 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 NUDT12Q9BQG2 462 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 CABP5Q9NP86 173 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 PCDH10Q9P2E7 1040 aa17.56■□□□□ 0.4
ALMS1-202ENST00000464408 RPTORQ8N122 1335 aa17.55■□□□□ 0.4
ALMS1-202ENST00000464408 CYP2D7A0A087X1C5 515 aa17.55■□□□□ 0.4
ALMS1-202ENST00000464408 MPHOSPH10O00566 681 aaKnown RBP17.55■□□□□ 0.4
ALMS1-202ENST00000464408 PRKAR2AP13861 404 aaKnown RBP17.55■□□□□ 0.4
ALMS1-202ENST00000464408 MAPK4P31152 587 aa17.55■□□□□ 0.4
ALMS1-202ENST00000464408 KIAA1755Q5JYT7 1200 aa17.55■□□□□ 0.4
ALMS1-202ENST00000464408 MORN1Q5T089 497 aa17.55■□□□□ 0.4
ALMS1-202ENST00000464408 MAP3K21Q5TCX8 1036 aa17.55■□□□□ 0.4
ALMS1-202ENST00000464408 HAUS7Q99871 368 aa17.55■□□□□ 0.4
ALMS1-202ENST00000464408 RPAP3Q9H6T3 665 aaPredicted RBP17.55■□□□□ 0.4
ALMS1-202ENST00000464408 BTBD7Q9P203 1132 aa17.55■□□□□ 0.4
ALMS1-202ENST00000464408 RBM27Q9P2N5 1060 aaKnown RBP17.55■□□□□ 0.4
ALMS1-202ENST00000464408 FRMPD3Q5JV73 1810 aa17.55■□□□□ 0.4
ALMS1-202ENST00000464408 SPDYE16A6NNV3 312 aaPredicted RBP17.54■□□□□ 0.4
ALMS1-202ENST00000464408 USP14P54578 494 aa17.54■□□□□ 0.4
ALMS1-202ENST00000464408 PLEKHH3Q7Z736 793 aa17.54■□□□□ 0.4
ALMS1-202ENST00000464408 HMX1Q9NP08 348 aaPredicted RBP17.54■□□□□ 0.4
ALMS1-202ENST00000464408 RABGAP1Q9Y3P9 1069 aa17.54■□□□□ 0.4
ALMS1-202ENST00000464408 PARP14Q460N5 1801 aa17.54■□□□□ 0.4
ALMS1-202ENST00000464408 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
ALMS1-202ENST00000464408 A0A0G2JMZ2 1700 aa17.53■□□□□ 0.4
ALMS1-202ENST00000464408 PDE3AQ14432 1141 aa17.53■□□□□ 0.4
ALMS1-202ENST00000464408 GTF3C2Q8WUA4 911 aaPredicted RBP17.53■□□□□ 0.4
ALMS1-202ENST00000464408 SOCS4Q8WXH5 440 aa17.53■□□□□ 0.4
ALMS1-202ENST00000464408 EVI5O60447 810 aa17.52■□□□□ 0.4
ALMS1-202ENST00000464408 XRCC5P13010 732 aaKnown RBP17.52■□□□□ 0.4
ALMS1-202ENST00000464408 AKR1B1P15121 316 aa17.52■□□□□ 0.4
ALMS1-202ENST00000464408 ZKSCAN1P17029 563 aaPredicted RBP17.52■□□□□ 0.4
ALMS1-202ENST00000464408 CCND3P30281 292 aaPredicted RBP17.52■□□□□ 0.4
ALMS1-202ENST00000464408 CACNB2Q08289 660 aaPredicted RBP17.52■□□□□ 0.4
ALMS1-202ENST00000464408 SIAH1Q8IUQ4 282 aa17.52■□□□□ 0.4
ALMS1-202ENST00000464408 CCAR1Q8IX12 1150 aaKnown RBP17.52■□□□□ 0.4
ALMS1-202ENST00000464408 LRRCC1Q9C099 1032 aa17.52■□□□□ 0.4
ALMS1-202ENST00000464408 PRO3102Q9H379 93 aa17.52■□□□□ 0.4
ALMS1-202ENST00000464408 FLRT1Q9NZU1 646 aa17.52■□□□□ 0.4
ALMS1-202ENST00000464408 RGS2P41220 211 aa17.51■□□□□ 0.39
ALMS1-202ENST00000464408 WDR78Q5VTH9 848 aa17.51■□□□□ 0.39
ALMS1-202ENST00000464408 TSHZ3Q63HK5 1081 aa17.51■□□□□ 0.39
ALMS1-202ENST00000464408 LBX2Q6XYB7 198 aa17.51■□□□□ 0.39
ALMS1-202ENST00000464408 NECAB2Q7Z6G3 386 aa17.51■□□□□ 0.39
ALMS1-202ENST00000464408 APBA2Q99767 749 aa17.51■□□□□ 0.39
ALMS1-202ENST00000464408 PUS7LQ9H0K6 701 aaKnown RBP17.51■□□□□ 0.39
ALMS1-202ENST00000464408 NR2E3Q9Y5X4 410 aa17.51■□□□□ 0.39
ALMS1-202ENST00000464408 COL11A1P12107 1806 aaPredicted RBP17.5■□□□□ 0.39
ALMS1-202ENST00000464408 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.5■□□□□ 0.39
ALMS1-202ENST00000464408 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
ALMS1-202ENST00000464408 CWC22Q9HCG8 908 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms