RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 BICDL2A1A5D9 508 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 KRT13P13646 458 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 GJC1P36383 396 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 VAV2P52735 878 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 SND1Q7KZF4 910 aaKnown RBP eCLIP10.17□□□□□ -0.78
HPS4-208ENST00000464362 SV2BQ7L1I2 683 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 NBPF11Q86T75 865 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 PIH1D3Q9NQM4 214 aaKnown RBP10.17□□□□□ -0.78
HPS4-208ENST00000464362 EBAG9O00559 213 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 HGSO14964 777 aaPredicted RBP10.17□□□□□ -0.78
HPS4-208ENST00000464362 MAGEA1P43355 309 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 UBE4AQ14139 1066 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 C2CD5Q86YS7 1000 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 LCORLQ8N3X6 602 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.17□□□□□ -0.78
HPS4-208ENST00000464362 SOWAHDA6NJG2 315 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 MCAMP43121 646 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 MRPS25P82663 173 aaKnown RBP10.17□□□□□ -0.78
HPS4-208ENST00000464362 SLC35F6Q8N357 371 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 ACRBPQ8NEB7 543 aa10.17□□□□□ -0.78
HPS4-208ENST00000464362 FOXN1O15353 648 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 KIAA0753Q2KHM9 967 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 KLHL7Q8IXQ5 586 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 SNX29Q8TEQ0 813 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 ZC3H12CQ9C0D7 883 aaKnown RBP10.16□□□□□ -0.78
HPS4-208ENST00000464362 SPTLC3Q9NUV7 552 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 BIN2Q9UBW5 565 aaPredicted RBP10.16□□□□□ -0.78
HPS4-208ENST00000464362 LRWD1Q9UFC0 647 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 KCNJ18B7U540 433 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 CHMP2AO43633 222 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 GSTO1P78417 241 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 CHRNDQ07001 517 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 KCNJ12Q14500 433 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 HLFQ16534 295 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 CFAP58Q5T655 872 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 GIGYF2Q6Y7W6 1299 aaKnown RBP10.16□□□□□ -0.78
HPS4-208ENST00000464362 RRAGAQ7L523 313 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 MAEAQ7L5Y9 396 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 CCDC25Q86WR0 208 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 CCDC87Q9NVE4 849 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 RTCBQ9Y3I0 505 aaKnown RBP10.16□□□□□ -0.78
HPS4-208ENST00000464362 ERVV-2B6SEH9 535 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 ADD2P35612 726 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 CLCN6P51797 869 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 MORC3Q14149 939 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 ZSCAN26Q16670 478 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 HERC4Q5GLZ8 1057 aaPredicted RBP10.16□□□□□ -0.78
HPS4-208ENST00000464362 FAM76AQ8TAV0 307 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 ZSCAN10Q96SZ4 725 aaPredicted RBP10.16□□□□□ -0.78
HPS4-208ENST00000464362 PDE11AQ9HCR9 933 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 ANKRD65E5RJM6 399 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 UFL1O94874 794 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 IVLP07476 585 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 TECP42680 631 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 SP4Q02446 784 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 OR8K1Q8NGG5 319 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 ZCCHC17Q9NP64 241 aaKnown RBP10.16□□□□□ -0.78
HPS4-208ENST00000464362 A2ML1A8K2U0 1454 aa10.16□□□□□ -0.78
HPS4-208ENST00000464362 QRICH2Q9H0J4 1663 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 INO80Q9ULG1 1556 aaPredicted RBP10.15□□□□□ -0.78
HPS4-208ENST00000464362 GOLGA6L10A0A0M3HER8 536 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 FAM182BQ5T319 152 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 C8orf74Q6P047 294 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 CABP7Q86V35 215 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 TBC1D10CQ8IV04 446 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 PNMA1Q8ND90 353 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 SMARCC2Q8TAQ2 1214 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 FERMT2Q96AC1 680 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 SLC39A2Q9NP94 309 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 MAN1B1Q9UKM7 699 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 CRB1P82279 1406 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 MROH5Q6ZUA9 1318 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 DIP2BQ9P265 1576 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 PLEKHG1Q9ULL1 1385 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 PLCD1P51178 756 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 RBL2Q08999 1139 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 TCP10Q12799 353 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 ZNF804AQ7Z570 1209 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 TICAM2Q86XR7 235 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 GPR161Q8N6U8 529 aaKnown RBP10.15□□□□□ -0.78
HPS4-208ENST00000464362 SLAIN2Q9P270 581 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 SIGLEC1Q9BZZ2 1709 aa10.15□□□□□ -0.78
HPS4-208ENST00000464362 IQSEC2Q5JU85 1478 aa10.15□□□□□ -0.79
HPS4-208ENST00000464362 NLRP1Q9C000 1473 aa10.15□□□□□ -0.79
HPS4-208ENST00000464362 PSDA5PKW4 1024 aaPredicted RBP10.15□□□□□ -0.79
HPS4-208ENST00000464362 UBE3CQ15386 1083 aa10.15□□□□□ -0.79
HPS4-208ENST00000464362 ZYXQ15942 572 aaKnown RBP10.15□□□□□ -0.79
HPS4-208ENST00000464362 WDR78Q5VTH9 848 aa10.15□□□□□ -0.79
HPS4-208ENST00000464362 TTC19Q6DKK2 380 aaPredicted RBP10.15□□□□□ -0.79
HPS4-208ENST00000464362 SECISBP2LQ93073 1101 aaKnown RBP10.15□□□□□ -0.79
HPS4-208ENST00000464362 SPDYE3A6NKU9 549 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 BUB1O43683 1085 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 RPS8P62241 208 aaKnown RBP10.14□□□□□ -0.79
HPS4-208ENST00000464362 CETN1Q12798 172 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 RASGRF1Q13972 1273 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 NONOQ15233 471 aaKnown RBP eCLIP10.14□□□□□ -0.79
HPS4-208ENST00000464362 PARP10Q53GL7 1025 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 SPATA1Q5VX52 437 aa10.14□□□□□ -0.79
HPS4-208ENST00000464362 CYB5R4Q7L1T6 521 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms