RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 ZFYVE28Q9HCC9 887 aa8.56□□□□□ -1.04
VPS8-216ENST00000463687 PPP4R2Q9NY27 417 aa8.56□□□□□ -1.04
VPS8-216ENST00000463687 STK17AQ9UEE5 414 aa8.56□□□□□ -1.04
VPS8-216ENST00000463687 FOXD3Q9UJU5 478 aaPredicted RBP8.56□□□□□ -1.04
VPS8-216ENST00000463687 SIPA1L3O60292 1781 aaPredicted RBP8.56□□□□□ -1.04
VPS8-216ENST00000463687 UBR2Q8IWV8 1755 aa8.56□□□□□ -1.04
VPS8-216ENST00000463687 TJP1Q07157 1748 aa8.55□□□□□ -1.04
VPS8-216ENST00000463687 hCG_2014768A0A024R1R8 64 aa8.55□□□□□ -1.04
VPS8-216ENST00000463687 K7ELQ4 463 aaPredicted RBP8.55□□□□□ -1.04
VPS8-216ENST00000463687 TCERG1O14776 1098 aaKnown RBP8.55□□□□□ -1.04
VPS8-216ENST00000463687 GADD45BO75293 160 aaPredicted RBP8.55□□□□□ -1.04
VPS8-216ENST00000463687 DDX58O95786 925 aaKnown RBP8.55□□□□□ -1.04
VPS8-216ENST00000463687 SERPINB2P05120 415 aa8.55□□□□□ -1.04
VPS8-216ENST00000463687 IRS1P35568 1242 aa8.55□□□□□ -1.04
VPS8-216ENST00000463687 DDR1Q08345 913 aa8.55□□□□□ -1.04
VPS8-216ENST00000463687 RNF187Q5TA31 235 aaPredicted RBP8.55□□□□□ -1.04
VPS8-216ENST00000463687 PDE12Q6L8Q7 609 aaKnown RBP8.55□□□□□ -1.04
VPS8-216ENST00000463687 ERMP1Q7Z2K6 904 aa8.55□□□□□ -1.04
VPS8-216ENST00000463687 ZNF295-AS1Q8N0V1 137 aa8.55□□□□□ -1.04
VPS8-216ENST00000463687 SYT17Q9BSW7 474 aa8.55□□□□□ -1.04
VPS8-216ENST00000463687 SPON2Q9BUD6 331 aa8.55□□□□□ -1.04
VPS8-216ENST00000463687 PHAXQ9H814 394 aaKnown RBP8.55□□□□□ -1.04
VPS8-216ENST00000463687 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
VPS8-216ENST00000463687 CD2APQ9Y5K6 639 aa8.55□□□□□ -1.04
VPS8-216ENST00000463687 CARMIL3Q8ND23 1372 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 TXLNAP40222 546 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 TCIRG1Q13488 830 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 PWP1Q13610 501 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 TCEAL1Q15170 157 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 PTPROQ16827 1216 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 ALDH1L2Q3SY69 923 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 PARP10Q53GL7 1025 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 NXPE4Q6UWF7 544 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 TPTE2Q6XPS3 522 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 JAZF1Q86VZ6 243 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 ZNF34Q8IZ26 560 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 RASGRP4Q8TDF6 673 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
VPS8-216ENST00000463687 KDM3BQ7LBC6 1761 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 PI4KAP2A4QPH2 592 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 NPHP1O15259 732 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 XRCC5P13010 732 aaKnown RBP8.53□□□□□ -1.04
VPS8-216ENST00000463687 IDH3AP50213 366 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 ARSDP51689 593 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 INSM1Q01101 510 aaPredicted RBP8.53□□□□□ -1.04
VPS8-216ENST00000463687 IER5Q5VY09 327 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 KSR2Q6VAB6 950 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 NBPF5PQ86XG9 351 aaPredicted RBP8.53□□□□□ -1.04
VPS8-216ENST00000463687 RELL1Q8IUW5 271 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 KIAA0825Q8IV33 1275 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 PI4KAP1Q8N8J0 262 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 CNBD1Q8NA66 436 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 AIDAQ96BJ3 306 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 AGBL1Q96MI9 1066 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 NOC4LQ9BVI4 516 aaKnown RBP8.53□□□□□ -1.04
VPS8-216ENST00000463687 BCO2Q9BYV7 579 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 NYXQ9GZU5 481 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 NPHS2Q9NP85 383 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 COPRSQ9NQ92 184 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 ANKIB1Q9P2G1 1089 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 TTF2Q9UNY4 1162 aaKnown RBP8.53□□□□□ -1.04
VPS8-216ENST00000463687 ATP10DQ9P241 1426 aa8.53□□□□□ -1.04
VPS8-216ENST00000463687 UTRNP46939 3433 aa8.52□□□□□ -1.04
VPS8-216ENST00000463687 DLG5Q8TDM6 1919 aa8.52□□□□□ -1.04
VPS8-216ENST00000463687 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
VPS8-216ENST00000463687 WIPF1O43516 503 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 BMP1P13497 986 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 GPTP24298 496 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 GSTT1P30711 240 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 PLA2G4AP47712 749 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 ANAPC15P60006 121 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 TGFB2P61812 414 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 ST5P78524 1137 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 TRIM28Q13263 835 aaKnown RBP8.52□□□□□ -1.05
VPS8-216ENST00000463687 PRR5LQ6MZQ0 368 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 G2E3Q7L622 706 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 PPP1R42Q7Z4L9 355 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 CMTR1Q8N1G2 835 aaKnown RBP8.52□□□□□ -1.05
VPS8-216ENST00000463687 SSH1Q8WYL5 1049 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 MKL1Q969V6 931 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 SUSD3Q96L08 255 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 ISCA1Q9BUE6 129 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 METTL22Q9BUU2 404 aaPredicted RBP8.52□□□□□ -1.05
VPS8-216ENST00000463687 TRIM55Q9BYV6 548 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 KBTBD4Q9NVX7 518 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 DMGDHQ9UI17 866 aaKnown RBP8.52□□□□□ -1.05
VPS8-216ENST00000463687 GPC6Q9Y625 555 aaPredicted RBP8.52□□□□□ -1.05
VPS8-216ENST00000463687 MRPL42Q9Y6G3 142 aaKnown RBP8.52□□□□□ -1.05
VPS8-216ENST00000463687 CASZ1Q86V15 1759 aa8.52□□□□□ -1.05
VPS8-216ENST00000463687 RARSP54136 660 aaKnown RBP8.51□□□□□ -1.05
VPS8-216ENST00000463687 NEXNQ0ZGT2 675 aa8.51□□□□□ -1.05
VPS8-216ENST00000463687 SUSD4Q5VX71 490 aa8.51□□□□□ -1.05
VPS8-216ENST00000463687 NOL8Q76FK4 1167 aaKnown RBP8.51□□□□□ -1.05
VPS8-216ENST00000463687 NLRP10Q86W26 655 aa8.51□□□□□ -1.05
VPS8-216ENST00000463687 KDF1Q8NAX2 398 aaPredicted RBP8.51□□□□□ -1.05
VPS8-216ENST00000463687 MYD88Q99836 296 aa8.51□□□□□ -1.05
VPS8-216ENST00000463687 RSRP1Q9BUV0 290 aa8.51□□□□□ -1.05
VPS8-216ENST00000463687 UTP14AQ9BVJ6 771 aaKnown RBP8.51□□□□□ -1.05
VPS8-216ENST00000463687 BRIP1Q9BX63 1249 aa8.51□□□□□ -1.05
VPS8-216ENST00000463687 ELP3Q9H9T3 547 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms