RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 MTMR4Q9NYA4 1195 aa16.36■□□□□ 0.21
PHACTR4-203ENST00000463428 PTPRAP18433 802 aa16.36■□□□□ 0.21
PHACTR4-203ENST00000463428 CLEC10AQ8IUN9 316 aa16.36■□□□□ 0.21
PHACTR4-203ENST00000463428 CLMNQ96JQ2 1002 aa16.36■□□□□ 0.21
PHACTR4-203ENST00000463428 ZSCAN10Q96SZ4 725 aaPredicted RBP16.36■□□□□ 0.21
PHACTR4-203ENST00000463428 AGXT2Q9BYV1 514 aa16.36■□□□□ 0.21
PHACTR4-203ENST00000463428 KANSL2Q9H9L4 492 aa16.36■□□□□ 0.21
PHACTR4-203ENST00000463428 GPHNQ9NQX3 736 aaPredicted RBP16.36■□□□□ 0.21
PHACTR4-203ENST00000463428 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
PHACTR4-203ENST00000463428 MYH4Q9Y623 1939 aa16.35■□□□□ 0.21
PHACTR4-203ENST00000463428 SH2B2O14492 632 aaPredicted RBP16.35■□□□□ 0.21
PHACTR4-203ENST00000463428 CCDC84Q86UT8 332 aaPredicted RBP16.35■□□□□ 0.21
PHACTR4-203ENST00000463428 IQCA1Q86XH1 822 aa16.35■□□□□ 0.21
PHACTR4-203ENST00000463428 DGKHQ86XP1 1220 aa16.35■□□□□ 0.21
PHACTR4-203ENST00000463428 ENAHQ8N8S7 591 aaPredicted RBP16.35■□□□□ 0.21
PHACTR4-203ENST00000463428 TMEM87BQ96K49 555 aa16.35■□□□□ 0.21
PHACTR4-203ENST00000463428 LRRC2Q9BYS8 371 aa16.35■□□□□ 0.21
PHACTR4-203ENST00000463428 ALDH8A1Q9H2A2 487 aaPredicted RBP16.35■□□□□ 0.21
PHACTR4-203ENST00000463428 TNKSO95271 1327 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 USP17L5A8MUK1 530 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 IFIT3O14879 490 aaKnown RBP16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 NEK4P51957 841 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 RABEP1Q15276 862 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 CCDC178Q5BJE1 867 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 SAPCD2Q86UD0 394 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 MKL1Q969V6 931 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 LY9Q9HBG7 655 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 SENP2Q9HC62 589 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 NYAP2Q9P242 653 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 CSADQ9Y600 493 aa16.34■□□□□ 0.21
PHACTR4-203ENST00000463428 A0A1W2PRG0 241 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 TMEM88BA6NKF7 163 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 EEF2P13639 858 aaKnown RBP16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 LIFRP42702 1097 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 TOB2Q14106 344 aaPredicted RBP16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 Q6ZUG5 572 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 ACER1Q8TDN7 264 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 UBAC1Q9BSL1 405 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 WDR18Q9BV38 432 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 ELP3Q9H9T3 547 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 PICK1Q9NRD5 415 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 PDRG1Q9NUG6 133 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 TLL2Q9Y6L7 1015 aa16.33■□□□□ 0.2
PHACTR4-203ENST00000463428 SPDYE5A6NIY4 337 aa16.32■□□□□ 0.2
PHACTR4-203ENST00000463428 ICA1Q05084 483 aa16.32■□□□□ 0.2
PHACTR4-203ENST00000463428 TMEM67Q5HYA8 995 aa16.32■□□□□ 0.2
PHACTR4-203ENST00000463428 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
PHACTR4-203ENST00000463428 TMEM47Q9BQJ4 181 aa16.32■□□□□ 0.2
PHACTR4-203ENST00000463428 CLIP2Q9UDT6 1046 aa16.32■□□□□ 0.2
PHACTR4-203ENST00000463428 AFG3L2Q9Y4W6 797 aa16.32■□□□□ 0.2
PHACTR4-203ENST00000463428 PTPRFP10586 1907 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 TTLL1O95922 423 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 GJA5P36382 358 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 ECE1P42892 770 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 HUNKP57058 714 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 PPATQ06203 517 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 WTAPQ15007 396 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 SART3Q15020 963 aaKnown RBP16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 SGMS1Q86VZ5 419 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 SLC10A4Q96EP9 437 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 STX8Q9UNK0 236 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 TMX2Q9Y320 296 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 ZHX2Q9Y6X8 837 aa16.31■□□□□ 0.2
PHACTR4-203ENST00000463428 ERICH2A1L162 156 aa16.3■□□□□ 0.2
PHACTR4-203ENST00000463428 TOP1P11387 765 aaKnown RBP16.3■□□□□ 0.2
PHACTR4-203ENST00000463428 APLP1P51693 650 aa16.3■□□□□ 0.2
PHACTR4-203ENST00000463428 AK2P54819 239 aa16.3■□□□□ 0.2
PHACTR4-203ENST00000463428 EVCP57679 992 aa16.3■□□□□ 0.2
PHACTR4-203ENST00000463428 PPP4R3BQ5MIZ7 849 aa16.3■□□□□ 0.2
PHACTR4-203ENST00000463428 TMTC2Q8N394 836 aa16.3■□□□□ 0.2
PHACTR4-203ENST00000463428 ZNF280CQ8ND82 737 aa16.3■□□□□ 0.2
PHACTR4-203ENST00000463428 IL27Q8NEV9 243 aa16.3■□□□□ 0.2
PHACTR4-203ENST00000463428 TBC1D2Q9BYX2 928 aa16.3■□□□□ 0.2
PHACTR4-203ENST00000463428 SPP2Q13103 211 aa16.29■□□□□ 0.2
PHACTR4-203ENST00000463428 IFIT1BQ5T764 474 aaKnown RBP16.29■□□□□ 0.2
PHACTR4-203ENST00000463428 BRF1Q92994 677 aa16.29■□□□□ 0.2
PHACTR4-203ENST00000463428 OPTNQ96CV9 577 aa16.29■□□□□ 0.2
PHACTR4-203ENST00000463428 HHIPL1Q96JK4 782 aa16.29■□□□□ 0.2
PHACTR4-203ENST00000463428 KIAA1683Q9H0B3 1180 aa16.29■□□□□ 0.2
PHACTR4-203ENST00000463428 AS3MTQ9HBK9 375 aa16.29■□□□□ 0.2
PHACTR4-203ENST00000463428 ARHGEF10LQ9HCE6 1279 aa16.29■□□□□ 0.2
PHACTR4-203ENST00000463428 BRPF3Q9ULD4 1205 aa16.29■□□□□ 0.2
PHACTR4-203ENST00000463428 SYNPO2Q9UMS6 1093 aa16.29■□□□□ 0.2
PHACTR4-203ENST00000463428 IRF6O14896 467 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 CD2BP2O95400 341 aaKnown RBP16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 PPIL2Q13356 520 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 RGMBQ6NW40 437 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 LRRC47Q8N1G4 583 aaKnown RBP16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 OTUD5Q96G74 571 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 WNK4Q96J92 1243 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 KCNH4Q9UQ05 1017 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 USP17L10C9JJH3 530 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 CXCL11O14625 94 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 BACE1P56817 501 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 APOBRQ0VD83 1088 aa16.28■□□□□ 0.2
PHACTR4-203ENST00000463428 SH3D19Q5HYK7 790 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms