RNA–Protein interactions for RNA: ENST00000463093.5

SSBP1-203, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-203ENST00000463093 KANSL2Q9H9L4 492 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 INCENPQ9NQS7 918 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 CTNNA3Q9UI47 895 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 SLC45A1Q9Y2W3 748 aa16.19■□□□□ 0.18
SSBP1-203ENST00000463093 NAV1Q8NEY1 1877 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 PDHXO00330 501 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 PRDM1O75626 825 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 HMGCS2P54868 508 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 CRHR2Q13324 411 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 MTMR2Q13614 643 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 TAF1CQ15572 869 aaPredicted RBP16.18■□□□□ 0.18
SSBP1-203ENST00000463093 USP17L2Q6R6M4 530 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 PROCA1Q8NCQ7 364 aaPredicted RBP16.18■□□□□ 0.18
SSBP1-203ENST00000463093 KIAA1683Q9H0B3 1180 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 ZFYVE28Q9HCC9 887 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 EMILIN3Q9NT22 766 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 TMOD4Q9NZQ9 345 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
SSBP1-203ENST00000463093 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
SSBP1-203ENST00000463093 DDX60LQ5H9U9 1706 aaKnown RBP16.18■□□□□ 0.18
SSBP1-203ENST00000463093 ORC4O43929 436 aa16.17■□□□□ 0.18
SSBP1-203ENST00000463093 NEDD1Q8NHV4 660 aa16.17■□□□□ 0.18
SSBP1-203ENST00000463093 AGTPBP1Q9UPW5 1226 aa16.17■□□□□ 0.18
SSBP1-203ENST00000463093 DOCK1Q14185 1865 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 A0A1W2PRG0 241 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 GPR25O00155 361 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 ZNF213O14771 459 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 USP14P54578 494 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 HAND2P61296 217 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 TFAP4Q01664 338 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 PTH1RQ03431 593 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 TREML2Q5T2D2 321 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 ESYT1Q9BSJ8 1104 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 RNF39Q9H2S5 420 aa16.16■□□□□ 0.18
SSBP1-203ENST00000463093 IGKV6D-41A0A0C4DH26 115 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 TLR2O60603 784 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 PCP11498 1178 aaKnown RBP16.15■□□□□ 0.18
SSBP1-203ENST00000463093 EEF2P13639 858 aaKnown RBP16.15■□□□□ 0.18
SSBP1-203ENST00000463093 HOXA7P31268 230 aaPredicted RBP16.15■□□□□ 0.18
SSBP1-203ENST00000463093 ICA1Q05084 483 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 DGKZQ13574 1117 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 AKNAD1Q5T1N1 836 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 KIAA1211Q6ZU35 1233 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 C12orf42Q96LP6 360 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 FEZ1Q99689 392 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 NBPF3Q9H094 633 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 ARHGEF10LQ9HCE6 1279 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 TMX2Q9Y320 296 aa16.15■□□□□ 0.18
SSBP1-203ENST00000463093 CDC45O75419 566 aa16.14■□□□□ 0.17
SSBP1-203ENST00000463093 PABPC4Q13310 644 aaKnown RBP eCLIP16.14■□□□□ 0.17
SSBP1-203ENST00000463093 FAM47AQ5JRC9 791 aa16.14■□□□□ 0.17
SSBP1-203ENST00000463093 MFSD6Q6ZSS7 791 aa16.14■□□□□ 0.17
SSBP1-203ENST00000463093 CLEC10AQ8IUN9 316 aa16.14■□□□□ 0.17
SSBP1-203ENST00000463093 STAG1Q8WVM7 1258 aa16.14■□□□□ 0.17
SSBP1-203ENST00000463093 MAP4K1Q92918 833 aa16.14■□□□□ 0.17
SSBP1-203ENST00000463093 MKL1Q969V6 931 aa16.14■□□□□ 0.17
SSBP1-203ENST00000463093 RNF41Q9H4P4 317 aaPredicted RBP16.14■□□□□ 0.17
SSBP1-203ENST00000463093 NYAP2Q9P242 653 aa16.14■□□□□ 0.17
SSBP1-203ENST00000463093 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
SSBP1-203ENST00000463093 PHIPQ8WWQ0 1821 aa16.14■□□□□ 0.17
SSBP1-203ENST00000463093 PCNTO95613 3336 aa16.14■□□□□ 0.17
SSBP1-203ENST00000463093 RANBP6O60518 1105 aaKnown RBP16.13■□□□□ 0.17
SSBP1-203ENST00000463093 FKTNO75072 461 aa16.13■□□□□ 0.17
SSBP1-203ENST00000463093 TSPY3P0CV98 308 aa16.13■□□□□ 0.17
SSBP1-203ENST00000463093 TSPY8P0CW00 308 aa16.13■□□□□ 0.17
SSBP1-203ENST00000463093 CYP2C8P10632 490 aa16.13■□□□□ 0.17
SSBP1-203ENST00000463093 OSBPP22059 807 aa16.13■□□□□ 0.17
SSBP1-203ENST00000463093 IMMTQ16891 758 aaKnown RBP16.13■□□□□ 0.17
SSBP1-203ENST00000463093 CASC1Q6TDU7 716 aa16.13■□□□□ 0.17
SSBP1-203ENST00000463093 C17orf99Q6UX52 265 aa16.13■□□□□ 0.17
SSBP1-203ENST00000463093 TBC1D10CQ8IV04 446 aa16.13■□□□□ 0.17
SSBP1-203ENST00000463093 ZNF296Q8WUU4 475 aaPredicted RBP16.13■□□□□ 0.17
SSBP1-203ENST00000463093 PARK7Q99497 189 aaKnown RBP16.13■□□□□ 0.17
SSBP1-203ENST00000463093 SH2D4AQ9H788 454 aa16.13■□□□□ 0.17
SSBP1-203ENST00000463093 MTMR4Q9NYA4 1195 aa16.13■□□□□ 0.17
SSBP1-203ENST00000463093 ATP2B2Q01814 1243 aa16.12■□□□□ 0.17
SSBP1-203ENST00000463093 ZYXQ15942 572 aaKnown RBP16.12■□□□□ 0.17
SSBP1-203ENST00000463093 CEP95Q96GE4 821 aa16.12■□□□□ 0.17
SSBP1-203ENST00000463093 P2RX7Q99572 595 aaKnown RBP16.12■□□□□ 0.17
SSBP1-203ENST00000463093 LSG1Q9H089 658 aaKnown RBP16.12■□□□□ 0.17
SSBP1-203ENST00000463093 ASCC2Q9H1I8 757 aaPredicted RBP16.12■□□□□ 0.17
SSBP1-203ENST00000463093 TOMM22Q9NS69 142 aa16.12■□□□□ 0.17
SSBP1-203ENST00000463093 CLIP2Q9UDT6 1046 aa16.12■□□□□ 0.17
SSBP1-203ENST00000463093 PNMA3Q9UL41 463 aa16.12■□□□□ 0.17
SSBP1-203ENST00000463093 CASP8AP2Q9UKL3 1982 aa16.12■□□□□ 0.17
SSBP1-203ENST00000463093 TSPY2A6NKD2 308 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 USP17L15C9J2P7 530 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 USP17L13C9JLJ4 530 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 USP17L11C9JVI0 530 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 USP17L18D6R9N7 530 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 USP17L22D6RA61 530 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 USP17L17D6RBQ6 530 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 USP17L19D6RCP7 530 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 USP17L20D6RJB6 530 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 TTLL1O95922 423 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 NT5C2P49902 561 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 SP3Q02447 781 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 USP17L24Q0WX57 530 aa16.11■□□□□ 0.17
SSBP1-203ENST00000463093 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms