RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 MCATQ8IVS2 390 aaKnown RBP5.22□□□□□ -1.57
GPNMB-205ENST00000463011 TMEM87BQ96K49 555 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 RUSC1Q9BVN2 902 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 LGR4Q9BXB1 951 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 MBIPQ9NS73 344 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 SUSD2Q9UGT4 822 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 MRPS23Q9Y3D9 190 aaKnown RBP5.22□□□□□ -1.57
GPNMB-205ENST00000463011 PCDHGC5Q9Y5F6 944 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 IGF1RP08069 1367 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 C9IYK1 514 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 C11orf95C9JLR9 678 aaPredicted RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 M0R082 166 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 TM4SF5O14894 197 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 RGS13O14921 159 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 FANCGO15287 622 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 EPHX1P07099 455 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 NAT2P11245 290 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 SDSP20132 328 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 ZNF143P52747 638 aaPredicted RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 ERVK-24P63145 666 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 PPP2R2AP63151 447 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 EXOSC10Q01780 885 aaKnown RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 ID3Q02535 119 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 SETDB1Q15047 1291 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 FNDC3BQ53EP0 1204 aaKnown RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 HP1BP3Q5SSJ5 553 aaPredicted RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 ZBTB37Q5TC79 503 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 SLC6A19Q695T7 634 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 HEATR6Q6AI08 1181 aaKnown RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 RNF180Q86T96 592 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 HID1Q8IV36 788 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 SCUBE1Q8IWY4 988 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 RAVER1Q8IY67 606 aaKnown RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 SLFN12Q8IYM2 578 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 GPR161Q8N6U8 529 aaKnown RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 GOLGA6L1Q8N7Z2 621 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 LRRN4CLQ8ND94 238 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 ATL2Q8NHH9 583 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 ZNF417Q8TAU3 575 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 BAHD1Q8TBE0 780 aaPredicted RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 ZNF507Q8TCN5 953 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 FGD4Q96M96 766 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 ZNF587Q96SQ5 575 aaPredicted RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 DPH2Q9BQC3 489 aaPredicted RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 AARSD1Q9BTE6 412 aaKnown RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 FBRSQ9HAH7 460 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 SUCOQ9UBS9 1254 aaKnown RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 PPP1R9AQ9ULJ8 1098 aa5.21□□□□□ -1.58
GPNMB-205ENST00000463011 THRAP3Q9Y2W1 955 aaKnown RBP5.21□□□□□ -1.58
GPNMB-205ENST00000463011 GSG1L2A8MUP6 293 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 ADAM11O75078 769 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 UBOX5O94941 541 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 ITGAVP06756 1048 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 CD68P34810 354 aaPredicted RBP5.2□□□□□ -1.58
GPNMB-205ENST00000463011 AKAP4Q5JQC9 854 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 ADAT2Q7Z6V5 191 aaKnown RBP5.2□□□□□ -1.58
GPNMB-205ENST00000463011 DMRTC2Q8IXT2 367 aaPredicted RBP5.2□□□□□ -1.58
GPNMB-205ENST00000463011 ZNF512BQ96KM6 892 aaPredicted RBP5.2□□□□□ -1.58
GPNMB-205ENST00000463011 CCDC74BQ96LY2 380 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 HAUS7Q99871 368 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 TARS2Q9BW92 718 aaKnown RBP5.2□□□□□ -1.58
GPNMB-205ENST00000463011 KCNK4Q9NYG8 393 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 GABBR1Q9UBS5 961 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 APEX2Q9UBZ4 518 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 TCEAL9Q9UHQ7 104 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 MCM8Q9UJA3 840 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 GDF2Q9UK05 429 aaPredicted RBP5.2□□□□□ -1.58
GPNMB-205ENST00000463011 EID1Q9Y6B2 187 aa5.2□□□□□ -1.58
GPNMB-205ENST00000463011 ALG1L2C9J202 215 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 TMPRSS2O15393 492 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 PRODHO43272 600 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 CLEC3AO75596 197 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 EPXP11678 715 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 NTF4P34130 210 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 GRIA2P42262 883 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 NKG7Q16617 165 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 EXOSC6Q5RKV6 272 aaKnown RBP5.19□□□□□ -1.58
GPNMB-205ENST00000463011 DCAF15Q66K64 600 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 NSMFQ6X4W1 530 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 SLCO4C1Q6ZQN7 724 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 C1orf229Q6ZS94 237 aaPredicted RBP5.19□□□□□ -1.58
GPNMB-205ENST00000463011 CDC37L1Q7L3B6 337 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 LRRTM3Q86VH5 581 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 MRPL41Q8IXM3 137 aaKnown RBP5.19□□□□□ -1.58
GPNMB-205ENST00000463011 CCDC144CPQ8IYA2 1237 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 MRPL4Q9BYD3 311 aaKnown RBP5.19□□□□□ -1.58
GPNMB-205ENST00000463011 DISC1Q9NRI5 854 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 MAPRE3Q9UPY8 281 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 WASHC2CQ9Y4E1 1318 aa5.19□□□□□ -1.58
GPNMB-205ENST00000463011 SPDYE3A6NKU9 549 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 CBFA2T2O43439 604 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 PABPC1P11940 636 aaKnown RBP5.18□□□□□ -1.58
GPNMB-205ENST00000463011 GUCY2FP51841 1108 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 FOXD4L6Q3SYB3 417 aaPredicted RBP5.18□□□□□ -1.58
GPNMB-205ENST00000463011 WWC2Q6AWC2 1192 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 FOXD4L3Q6VB84 417 aaPredicted RBP5.18□□□□□ -1.58
GPNMB-205ENST00000463011 DDX46Q7L014 1031 aaKnown RBP5.18□□□□□ -1.58
GPNMB-205ENST00000463011 UBE3DQ7Z6J8 389 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 STRA8Q7Z7C7 330 aa5.18□□□□□ -1.58
GPNMB-205ENST00000463011 ZNF227Q86WZ6 799 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms