RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 CDC42EP5Q6NZY7 148 aa16.77■□□□□ 0.28
HDAC6-213ENST00000462730 SLC44A5Q8NCS7 719 aa16.77■□□□□ 0.28
HDAC6-213ENST00000462730 DDX4Q9NQI0 724 aaKnown RBP16.77■□□□□ 0.28
HDAC6-213ENST00000462730 RTEL1Q9NZ71 1219 aa16.77■□□□□ 0.28
HDAC6-213ENST00000462730 PCDHAC2Q9Y5I4 1007 aa16.77■□□□□ 0.28
HDAC6-213ENST00000462730 DEXIO95424 95 aa16.77■□□□□ 0.27
HDAC6-213ENST00000462730 NT5C2P49902 561 aa16.77■□□□□ 0.27
HDAC6-213ENST00000462730 GNL2Q13823 731 aaKnown RBP16.77■□□□□ 0.27
HDAC6-213ENST00000462730 RBM28Q9NW13 759 aaKnown RBP16.77■□□□□ 0.27
HDAC6-213ENST00000462730 RBM5P52756 815 aaKnown RBP eCLIP16.76■□□□□ 0.27
HDAC6-213ENST00000462730 HDLBPQ00341 1268 aaKnown RBP16.76■□□□□ 0.27
HDAC6-213ENST00000462730 TROAPQ12815 778 aa16.76■□□□□ 0.27
HDAC6-213ENST00000462730 ZSCAN30Q86W11 494 aa16.76■□□□□ 0.27
HDAC6-213ENST00000462730 MRIQ9BWK5 157 aa16.76■□□□□ 0.27
HDAC6-213ENST00000462730 VPS33BQ9H267 617 aa16.76■□□□□ 0.27
HDAC6-213ENST00000462730 TAOK3Q9H2K8 898 aa16.76■□□□□ 0.27
HDAC6-213ENST00000462730 SERPINA10Q9UK55 444 aa16.76■□□□□ 0.27
HDAC6-213ENST00000462730 RAD17O75943 681 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 PLEKHA8P1O95397 391 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 NUP62CLQ9H1M0 184 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 DACT1Q9NYF0 836 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 MYO3BQ8WXR4 1341 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 PSMD14O00487 310 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 AKAP17AQ02040 695 aaKnown RBP16.75■□□□□ 0.27
HDAC6-213ENST00000462730 STK38Q15208 465 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 NIM1KQ8IY84 436 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 ZNF444Q8N0Y2 327 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-213ENST00000462730 RNF26Q9BY78 433 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-213ENST00000462730 DDX19AQ9NUU7 478 aaKnown RBP16.75■□□□□ 0.27
HDAC6-213ENST00000462730 BCS1LQ9Y276 419 aa16.75■□□□□ 0.27
HDAC6-213ENST00000462730 UTRNP46939 3433 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 TPM2P07951 284 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 TSPY3P0CV98 308 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 TSPY8P0CW00 308 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 ME1P48163 572 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 NFIAQ12857 509 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 RCSD1Q6JBY9 416 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 RSBN1LQ6PCB5 846 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-213ENST00000462730 TMTC3Q6ZXV5 915 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-213ENST00000462730 OSBPL5Q9H0X9 879 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-213ENST00000462730 KAT14Q9H8E8 782 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 ZNF287Q9HBT7 754 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 POLR3EQ9NVU0 708 aa16.74■□□□□ 0.27
HDAC6-213ENST00000462730 NFKBIEO00221 500 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 YEATS4O95619 227 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 RASA1P20936 1047 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 CDK8P49336 464 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 FUT2Q10981 343 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 CCDC178Q5BJE1 867 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 CCAR1Q8IX12 1150 aaKnown RBP16.73■□□□□ 0.27
HDAC6-213ENST00000462730 LINC00301Q8NCQ3 95 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDAC6-213ENST00000462730 IL17RBQ9NRM6 502 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 KCNJ14Q9UNX9 436 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 MYH8P13535 1937 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 MYH6P13533 1939 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 NR1I2O75469 434 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 MMP1P03956 469 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 U2AF2P26368 475 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDAC6-213ENST00000462730 CACNB3P54284 484 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 SAFBQ15424 915 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDAC6-213ENST00000462730 SF3A1Q15459 793 aaKnown RBP16.73■□□□□ 0.27
HDAC6-213ENST00000462730 ANO1Q5XXA6 986 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 DGKHQ86XP1 1220 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 RNF214Q8ND24 703 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 NLGN2Q8NFZ4 835 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 CLSTN2Q9H4D0 955 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 ZNRF3Q9ULT6 936 aa16.73■□□□□ 0.27
HDAC6-213ENST00000462730 ARFGEF1Q9Y6D6 1849 aa16.72■□□□□ 0.27
HDAC6-213ENST00000462730 PRPF3O43395 683 aaKnown RBP16.72■□□□□ 0.27
HDAC6-213ENST00000462730 VIL1P09327 827 aaKnown RBP16.72■□□□□ 0.27
HDAC6-213ENST00000462730 CAMK4Q16566 473 aa16.72■□□□□ 0.27
HDAC6-213ENST00000462730 CFAP100Q494V2 611 aa16.72■□□□□ 0.27
HDAC6-213ENST00000462730 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
HDAC6-213ENST00000462730 ANKS1AQ92625 1134 aa16.72■□□□□ 0.27
HDAC6-213ENST00000462730 TCP11L1Q9NUJ3 509 aa16.72■□□□□ 0.27
HDAC6-213ENST00000462730 CNTNAP5Q8WYK1 1306 aa16.72■□□□□ 0.27
HDAC6-213ENST00000462730 SPTLC2O15270 562 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 MAP3K11Q16584 847 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 DIS3L2Q8IYB7 885 aaKnown RBP16.71■□□□□ 0.27
HDAC6-213ENST00000462730 TNMDQ9H2S6 317 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 GOLPH3LQ9H4A5 285 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 PCDHA7Q9UN72 937 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 ZBTB12Q9Y330 459 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-213ENST00000462730 SIPA1L1O43166 1804 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 hCG_1642624A0A1W2PR95 340 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 MSNP26038 577 aaKnown RBP16.71■□□□□ 0.27
HDAC6-213ENST00000462730 PKN1Q16512 942 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 HS1BP3Q53T59 392 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 CCDC73Q6ZRK6 1079 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 FSIP1Q8NA03 581 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 PNMA1Q8ND90 353 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 FUCA2Q9BTY2 467 aa16.71■□□□□ 0.27
HDAC6-213ENST00000462730 V9GY48 417 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-213ENST00000462730 BTBD18B2RXH4 712 aa16.7■□□□□ 0.26
HDAC6-213ENST00000462730 KIF5BP33176 963 aa16.7■□□□□ 0.26
HDAC6-213ENST00000462730 GABPAQ06546 454 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms