RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 SEC23AQ15436 765 aa8.44□□□□□ -1.06
SREBF2-204ENST00000462539 CT47A1Q5JQC4 288 aaPredicted RBP8.44□□□□□ -1.06
SREBF2-204ENST00000462539 RRP12Q5JTH9 1297 aaKnown RBP8.44□□□□□ -1.06
SREBF2-204ENST00000462539 TMCO3Q6UWJ1 677 aa8.44□□□□□ -1.06
SREBF2-204ENST00000462539 RSRC2Q7L4I2 434 aaKnown RBP8.44□□□□□ -1.06
SREBF2-204ENST00000462539 APTXQ7Z2E3 356 aaKnown RBP8.44□□□□□ -1.06
SREBF2-204ENST00000462539 SH3RF1Q7Z6J0 888 aa8.44□□□□□ -1.06
SREBF2-204ENST00000462539 DZIP3Q86Y13 1208 aaKnown RBP8.44□□□□□ -1.06
SREBF2-204ENST00000462539 NUTM2AQ8IVF1 878 aaPredicted RBP8.44□□□□□ -1.06
SREBF2-204ENST00000462539 HELBQ8NG08 1087 aaPredicted RBP8.44□□□□□ -1.06
SREBF2-204ENST00000462539 PANX2Q96RD6 677 aa8.44□□□□□ -1.06
SREBF2-204ENST00000462539 WDR24Q96S15 920 aa8.44□□□□□ -1.06
SREBF2-204ENST00000462539 ZKSCAN3Q9BRR0 538 aa8.44□□□□□ -1.06
SREBF2-204ENST00000462539 RNF26Q9BY78 433 aaPredicted RBP8.44□□□□□ -1.06
SREBF2-204ENST00000462539 NACAP1Q9BZK3 213 aa8.44□□□□□ -1.06
SREBF2-204ENST00000462539 UBXN6Q9BZV1 441 aa8.44□□□□□ -1.06
SREBF2-204ENST00000462539 CSRNP2Q9H175 543 aa8.44□□□□□ -1.06
SREBF2-204ENST00000462539 RNF41Q9H4P4 317 aaPredicted RBP8.44□□□□□ -1.06
SREBF2-204ENST00000462539 SLC4A4Q9Y6R1 1079 aa8.44□□□□□ -1.06
SREBF2-204ENST00000462539 CDK5RAP2Q96SN8 1893 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 A0A087X0B3 334 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 ERICH2A1L162 156 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 FAM205CA6NFA0 338 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 AKR1B15C9JRZ8 316 aaPredicted RBP8.43□□□□□ -1.06
SREBF2-204ENST00000462539 SEC31AO94979 1220 aaKnown RBP8.43□□□□□ -1.06
SREBF2-204ENST00000462539 FECHP22830 423 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 KRT2P35908 639 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 IL6STP40189 918 aaPredicted RBP8.43□□□□□ -1.06
SREBF2-204ENST00000462539 ADKP55263 362 aaKnown RBP8.43□□□□□ -1.06
SREBF2-204ENST00000462539 GNG11P61952 73 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 C1QBPQ07021 282 aaKnown RBP8.43□□□□□ -1.06
SREBF2-204ENST00000462539 MKRN4PQ13434 485 aaPredicted RBP8.43□□□□□ -1.06
SREBF2-204ENST00000462539 CUL4BQ13620 913 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 NR1I3Q14994 352 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 HSP90AA4PQ58FG1 418 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 CDKAL1Q5VV42 579 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 SPATA1Q5VX52 437 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 PDILTQ8N807 584 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 PHF20Q9BVI0 1012 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 MRPL44Q9H9J2 332 aaKnown RBP8.43□□□□□ -1.06
SREBF2-204ENST00000462539 SAMSN1Q9NSI8 373 aaKnown RBP8.43□□□□□ -1.06
SREBF2-204ENST00000462539 ANAPC4Q9UJX5 808 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 TNKSO95271 1327 aa8.43□□□□□ -1.06
SREBF2-204ENST00000462539 CCDC66A2RUB6 948 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 TRIM75PA6NK02 468 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 SEMA3EO15041 775 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 MFAP3LO75121 409 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 TBC1D8O95759 1140 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 BMP15O95972 392 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 CD44P16070 742 aaKnown RBP8.42□□□□□ -1.06
SREBF2-204ENST00000462539 CDK11BP21127 795 aaKnown RBP8.42□□□□□ -1.06
SREBF2-204ENST00000462539 CYP2C19P33261 490 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 EVA1CP58658 441 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 FUT2Q10981 343 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 DPYDQ12882 1025 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 MTF1Q14872 753 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 KARSQ15046 597 aaKnown RBP8.42□□□□□ -1.06
SREBF2-204ENST00000462539 PKN1Q16512 942 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 TEX35Q5T0J7 233 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 SUSD4Q5VX71 490 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 CC2D1AQ6P1N0 951 aaPredicted RBP8.42□□□□□ -1.06
SREBF2-204ENST00000462539 RAD9BQ6WBX8 426 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 USP49Q70CQ1 688 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 TMTC2Q8N394 836 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 GPR161Q8N6U8 529 aaKnown RBP8.42□□□□□ -1.06
SREBF2-204ENST00000462539 FANCBQ8NB91 859 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 NUP133Q8WUM0 1156 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 RABGGTAQ92696 567 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 GOLGA1Q92805 767 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 TNFRSF25Q93038 417 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 DHX58Q96C10 678 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 PAGE5Q96GU1 130 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 DESI2Q9BSY9 194 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 NAA15Q9BXJ9 866 aaKnown RBP8.42□□□□□ -1.06
SREBF2-204ENST00000462539 TOMM22Q9NS69 142 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 ITIH6Q6UXX5 1313 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 CNTNAP5Q8WYK1 1306 aa8.42□□□□□ -1.06
SREBF2-204ENST00000462539 DDX60LQ5H9U9 1706 aaKnown RBP8.42□□□□□ -1.06
SREBF2-204ENST00000462539 KAT6BQ8WYB5 2073 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 ZNF804BA4D1E1 1349 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 XDHP47989 1333 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 SOWAHDA6NJG2 315 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 PPP1R3GB7ZBB8 358 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 SNAP23O00161 211 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 TEX33O43247 280 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 PRPF3O43395 683 aaKnown RBP8.41□□□□□ -1.06
SREBF2-204ENST00000462539 SASH3O75995 380 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 CCDC175P0C221 793 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 CYP7A1P22680 504 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 PPP2R5BQ15173 497 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 EARS2Q5JPH6 523 aaKnown RBP8.41□□□□□ -1.06
SREBF2-204ENST00000462539 ADGRA1Q86SQ6 560 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 FAM177A1Q8N128 213 aaPredicted RBP8.41□□□□□ -1.06
SREBF2-204ENST00000462539 CMTR1Q8N1G2 835 aaKnown RBP8.41□□□□□ -1.06
SREBF2-204ENST00000462539 MIGA1Q8NAN2 632 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 CCDC12Q8WUD4 166 aaPredicted RBP8.41□□□□□ -1.06
SREBF2-204ENST00000462539 ESR2Q92731 530 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 SYMPKQ92797 1274 aaKnown RBP8.41□□□□□ -1.06
SREBF2-204ENST00000462539 FERMT2Q96AC1 680 aa8.41□□□□□ -1.06
SREBF2-204ENST00000462539 CCDC34Q96HJ3 373 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms