RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 CALM1P0DP23 149 aa23.24■■□□□ 1.31
PTPN18-207ENST00000462321 CALM2P0DP24 149 aa23.24■■□□□ 1.31
PTPN18-207ENST00000462321 CALM3P0DP25 149 aa23.24■■□□□ 1.31
PTPN18-207ENST00000462321 RXRAP19793 462 aa23.24■■□□□ 1.31
PTPN18-207ENST00000462321 PPP4R3BQ5MIZ7 849 aa23.24■■□□□ 1.31
PTPN18-207ENST00000462321 MYH8P13535 1937 aa23.23■■□□□ 1.31
PTPN18-207ENST00000462321 CPLX1O14810 134 aa23.23■■□□□ 1.31
PTPN18-207ENST00000462321 HMGN5P82970 282 aaKnown RBP23.23■■□□□ 1.31
PTPN18-207ENST00000462321 MAP3K10Q02779 954 aa23.23■■□□□ 1.31
PTPN18-207ENST00000462321 TROAPQ12815 778 aa23.23■■□□□ 1.31
PTPN18-207ENST00000462321 PPP2R5BQ15173 497 aa23.23■■□□□ 1.31
PTPN18-207ENST00000462321 MTMR4Q9NYA4 1195 aa23.23■■□□□ 1.31
PTPN18-207ENST00000462321 PPP2R3BQ9Y5P8 575 aa23.23■■□□□ 1.31
PTPN18-207ENST00000462321 GREB1LQ9C091 1923 aaPredicted RBP23.22■■□□□ 1.31
PTPN18-207ENST00000462321 MPHOSPH10O00566 681 aaKnown RBP23.22■■□□□ 1.31
PTPN18-207ENST00000462321 RTN1Q16799 776 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 NUP133Q8WUM0 1156 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 SCAF8Q9UPN6 1271 aaKnown RBP23.22■■□□□ 1.31
PTPN18-207ENST00000462321 CCDC196A0A1B0GTZ2 297 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 PTPDC1A2A3K4 754 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 JAK2O60674 1132 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 CDKL5O76039 1030 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 CDC27P30260 824 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 CPLX2Q6PUV4 134 aaKnown RBP23.22■■□□□ 1.31
PTPN18-207ENST00000462321 TMEM179Q6ZVK1 233 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 CCDC144CPQ8IYA2 1237 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 FANCBQ8NB91 859 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 PNMA1Q8ND90 353 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 TMEM47Q9BQJ4 181 aa23.22■■□□□ 1.31
PTPN18-207ENST00000462321 FAM217BQ9NTX9 383 aaPredicted RBP23.22■■□□□ 1.31
PTPN18-207ENST00000462321 TOP1P11387 765 aaKnown RBP23.21■■□□□ 1.31
PTPN18-207ENST00000462321 NUCB2P80303 420 aa23.21■■□□□ 1.31
PTPN18-207ENST00000462321 ABCB5Q2M3G0 1257 aa23.21■■□□□ 1.31
PTPN18-207ENST00000462321 USP50Q70EL3 339 aaPredicted RBP23.21■■□□□ 1.31
PTPN18-207ENST00000462321 IQCA1LA6NCM1 817 aa23.2■■□□□ 1.3
PTPN18-207ENST00000462321 TTLL1O95922 423 aa23.2■■□□□ 1.3
PTPN18-207ENST00000462321 ADD1P35611 737 aaKnown RBP23.2■■□□□ 1.3
PTPN18-207ENST00000462321 MAP3K14Q99558 947 aa23.2■■□□□ 1.3
PTPN18-207ENST00000462321 RBM28Q9NW13 759 aaKnown RBP23.2■■□□□ 1.3
PTPN18-207ENST00000462321 EPHX2P34913 555 aa23.19■■□□□ 1.3
PTPN18-207ENST00000462321 HOOK2Q96ED9 719 aa23.19■■□□□ 1.3
PTPN18-207ENST00000462321 KIF3AQ9Y496 699 aa23.19■■□□□ 1.3
PTPN18-207ENST00000462321 GDF11O95390 407 aa23.19■■□□□ 1.3
PTPN18-207ENST00000462321 NTRK3Q16288 839 aa23.19■■□□□ 1.3
PTPN18-207ENST00000462321 MIGA2Q7L4E1 593 aa23.19■■□□□ 1.3
PTPN18-207ENST00000462321 KANSL2Q9H9L4 492 aa23.19■■□□□ 1.3
PTPN18-207ENST00000462321 CABP5Q9NP86 173 aa23.19■■□□□ 1.3
PTPN18-207ENST00000462321 DTNBO60941 627 aa23.18■■□□□ 1.3
PTPN18-207ENST00000462321 PDCP20941 246 aa23.18■■□□□ 1.3
PTPN18-207ENST00000462321 RRP1BQ14684 758 aaKnown RBP23.18■■□□□ 1.3
PTPN18-207ENST00000462321 RAB3GAP1Q15042 981 aa23.18■■□□□ 1.3
PTPN18-207ENST00000462321 CTCFLQ8NI51 663 aaPredicted RBP23.18■■□□□ 1.3
PTPN18-207ENST00000462321 WDR90Q96KV7 1748 aa23.17■■□□□ 1.3
PTPN18-207ENST00000462321 PDIA4P13667 645 aaKnown RBP23.17■■□□□ 1.3
PTPN18-207ENST00000462321 IFNAR1P17181 557 aa23.17■■□□□ 1.3
PTPN18-207ENST00000462321 CLEC10AQ8IUN9 316 aa23.17■■□□□ 1.3
PTPN18-207ENST00000462321 FAM184AQ8NB25 1140 aa23.17■■□□□ 1.3
PTPN18-207ENST00000462321 ZC3H15Q8WU90 426 aaKnown RBP23.17■■□□□ 1.3
PTPN18-207ENST00000462321 DDX11Q96FC9 970 aa23.17■■□□□ 1.3
PTPN18-207ENST00000462321 SCN4AP35499 1836 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 GH2P01242 217 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 SYT1P21579 422 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 KIF5BP33176 963 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 GUCY1A2P33402 732 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 PKP1Q13835 747 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 SHROOM1Q2M3G4 852 aaPredicted RBP23.16■■□□□ 1.3
PTPN18-207ENST00000462321 NBPF12Q5TAG4 269 aaPredicted RBP23.16■■□□□ 1.3
PTPN18-207ENST00000462321 DCAF15Q66K64 600 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 DCPSQ96C86 337 aaKnown RBP23.16■■□□□ 1.3
PTPN18-207ENST00000462321 NYAP2Q9P242 653 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 DCAF8L1A6NGE4 600 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 ICA1Q05084 483 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 GRM4Q14833 912 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 SEPT2Q15019 361 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 TAF1DQ9H5J8 278 aaPredicted RBP23.16■■□□□ 1.3
PTPN18-207ENST00000462321 CLIP2Q9UDT6 1046 aa23.16■■□□□ 1.3
PTPN18-207ENST00000462321 STK36Q9NRP7 1315 aa23.15■■□□□ 1.3
PTPN18-207ENST00000462321 CAP2P40123 477 aa23.15■■□□□ 1.3
PTPN18-207ENST00000462321 JAG1P78504 1218 aa23.15■■□□□ 1.3
PTPN18-207ENST00000462321 LARP1BQ659C4 914 aaKnown RBP23.15■■□□□ 1.3
PTPN18-207ENST00000462321 ZBTB21Q9ULJ3 1066 aa23.15■■□□□ 1.3
PTPN18-207ENST00000462321 PHF20L1A8MW92 1017 aa23.14■■□□□ 1.3
PTPN18-207ENST00000462321 STX6O43752 255 aa23.14■■□□□ 1.3
PTPN18-207ENST00000462321 BRD1O95696 1058 aa23.14■■□□□ 1.3
PTPN18-207ENST00000462321 FDPSP14324 419 aaKnown RBP23.14■■□□□ 1.3
PTPN18-207ENST00000462321 TMTC3Q6ZXV5 915 aa23.14■■□□□ 1.3
PTPN18-207ENST00000462321 SULF1Q8IWU6 871 aa23.14■■□□□ 1.3
PTPN18-207ENST00000462321 LRRC47Q8N1G4 583 aaKnown RBP23.14■■□□□ 1.3
PTPN18-207ENST00000462321 MKL1Q969V6 931 aa23.14■■□□□ 1.3
PTPN18-207ENST00000462321 ORC3Q9UBD5 711 aaPredicted RBP23.14■■□□□ 1.3
PTPN18-207ENST00000462321 WDR33Q9C0J8 1336 aaKnown RBP23.14■■□□□ 1.29
PTPN18-207ENST00000462321 POTECB2RU33 542 aa23.13■■□□□ 1.29
PTPN18-207ENST00000462321 FMNL1O95466 1100 aaPredicted RBP23.13■■□□□ 1.29
PTPN18-207ENST00000462321 EEF2P13639 858 aaKnown RBP23.13■■□□□ 1.29
PTPN18-207ENST00000462321 PPFIA3O75145 1194 aa23.13■■□□□ 1.29
PTPN18-207ENST00000462321 GNAQP50148 359 aa23.13■■□□□ 1.29
PTPN18-207ENST00000462321 ATP2B2Q01814 1243 aa23.13■■□□□ 1.29
PTPN18-207ENST00000462321 SSRP1Q08945 709 aaKnown RBP23.13■■□□□ 1.29
PTPN18-207ENST00000462321 PNMA8AQ86V59 439 aaPredicted RBP23.13■■□□□ 1.29
PTPN18-207ENST00000462321 PHKBQ93100 1093 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms