RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 PLCD1P51178 756 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 ATP2B2Q01814 1243 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 IRF5Q13568 498 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 RRP1BQ14684 758 aaKnown RBP10.65□□□□□ -0.7
LDB1-203ENST00000461873 UBE3CQ15386 1083 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 TMEM179Q6ZVK1 233 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 TRMT44Q8IYL2 757 aaKnown RBP10.65□□□□□ -0.7
LDB1-203ENST00000461873 LCORLQ8N3X6 602 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 SOCS4Q8WXH5 440 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 P2RX7Q99572 595 aaKnown RBP10.65□□□□□ -0.7
LDB1-203ENST00000461873 RIOK1Q9BRS2 568 aaKnown RBP10.65□□□□□ -0.7
LDB1-203ENST00000461873 DNAJC18Q9H819 358 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 MKNK2Q9HBH9 465 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 ZNF287Q9HBT7 754 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 GABRQQ9UN88 632 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 NAV1Q8NEY1 1877 aa10.65□□□□□ -0.7
LDB1-203ENST00000461873 RBBP6Q7Z6E9 1792 aaKnown RBP10.65□□□□□ -0.71
LDB1-203ENST00000461873 MYH8P13535 1937 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 ZSWIM8A7E2V4 1837 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 INHAP05111 366 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 ZFYP08048 801 aaPredicted RBP10.64□□□□□ -0.71
LDB1-203ENST00000461873 ELNP15502 786 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 CTGFP29279 349 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 CAP1Q01518 475 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 MTFR1Q15390 333 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
LDB1-203ENST00000461873 EDC3Q96F86 508 aaKnown RBP10.64□□□□□ -0.71
LDB1-203ENST00000461873 CCDC17Q96LX7 622 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 NACAP1Q9BZK3 213 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 TANGO6Q9C0B7 1094 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 DCTPP1Q9H773 170 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 HMX1Q9NP08 348 aaPredicted RBP10.64□□□□□ -0.71
LDB1-203ENST00000461873 DCP1AQ9NPI6 582 aaPredicted RBP10.64□□□□□ -0.71
LDB1-203ENST00000461873 HOXC10Q9NYD6 342 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 LOC285556D6RIA3 1793 aa10.64□□□□□ -0.71
LDB1-203ENST00000461873 MYH7P12883 1935 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 HMGCRP04035 888 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 SLC3A2P08195 630 aaKnown RBP10.63□□□□□ -0.71
LDB1-203ENST00000461873 GNAT2P19087 354 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 CYP2B6P20813 491 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 RGS2P41220 211 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 GJA8P48165 433 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 TDO2P48775 406 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 ERVK-9P63128 1117 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 ERVK-24P63145 666 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 SEPT2Q15019 361 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 U2AF1L4Q8WU68 220 aaKnown RBP10.63□□□□□ -0.71
LDB1-203ENST00000461873 KIAA1683Q9H0B3 1180 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 EMILIN3Q9NT22 766 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 ARPP21Q9UBL0 812 aaPredicted RBP10.63□□□□□ -0.71
LDB1-203ENST00000461873 MORF4L1Q9UBU8 362 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 CTDP1Q9Y5B0 961 aaPredicted RBP10.63□□□□□ -0.71
LDB1-203ENST00000461873 NR2E3Q9Y5X4 410 aa10.63□□□□□ -0.71
LDB1-203ENST00000461873 TCRBV5S4A2TA0A5A2 114 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 MINDY4BA8MYZ0 360 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 USP17L21D6R901 530 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 FARP2O94887 1054 aaPredicted RBP10.62□□□□□ -0.71
LDB1-203ENST00000461873 SGPL1O95470 568 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 ZKSCAN1P17029 563 aaPredicted RBP10.62□□□□□ -0.71
LDB1-203ENST00000461873 SHMT1P34896 483 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 RRP1P56182 461 aaKnown RBP10.62□□□□□ -0.71
LDB1-203ENST00000461873 ICA1Q05084 483 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 CATSPERGQ6ZRH7 1159 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 PLEKHH3Q7Z736 793 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 C12orf42Q96LP6 360 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 DEFB118Q96PH6 123 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 FSD1Q9BTV5 496 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 UNC93B1Q9H1C4 597 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 RPAP3Q9H6T3 665 aaPredicted RBP10.62□□□□□ -0.71
LDB1-203ENST00000461873 GOPCQ9HD26 462 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 SLC5A4Q9NY91 659 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 RABGAP1Q9Y3P9 1069 aa10.62□□□□□ -0.71
LDB1-203ENST00000461873 TTC41PQ6P2S7 1318 aa10.61□□□□□ -0.71
LDB1-203ENST00000461873 SIPA1L1O43166 1804 aa10.61□□□□□ -0.71
LDB1-203ENST00000461873 RNF113AO15541 343 aaKnown RBP10.61□□□□□ -0.71
LDB1-203ENST00000461873 PRKAB2O43741 272 aa10.61□□□□□ -0.71
LDB1-203ENST00000461873 CENPBP07199 599 aaPredicted RBP10.61□□□□□ -0.71
LDB1-203ENST00000461873 VCAM1P19320 739 aa10.61□□□□□ -0.71
LDB1-203ENST00000461873 PLS1Q14651 629 aa10.61□□□□□ -0.71
LDB1-203ENST00000461873 COG2Q14746 738 aa10.61□□□□□ -0.71
LDB1-203ENST00000461873 ANKRD45Q5TZF3 282 aa10.61□□□□□ -0.71
LDB1-203ENST00000461873 ZNF444Q8N0Y2 327 aaPredicted RBP10.61□□□□□ -0.71
LDB1-203ENST00000461873 KBTBD3Q8NAB2 608 aa10.61□□□□□ -0.71
LDB1-203ENST00000461873 APPBP2Q92624 585 aa10.61□□□□□ -0.71
LDB1-203ENST00000461873 LPAR1Q92633 364 aa10.61□□□□□ -0.71
LDB1-203ENST00000461873 TNRC18O15417 2968 aaPredicted RBP10.61□□□□□ -0.71
LDB1-203ENST00000461873 RPTORQ8N122 1335 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 DOCK3Q8IZD9 2030 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 FLOT1O75955 427 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 CYP2D6P10635 497 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 CDK8P49336 464 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 JAG1P78504 1218 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 SHROOM1Q2M3G4 852 aaPredicted RBP10.6□□□□□ -0.71
LDB1-203ENST00000461873 C12orf60Q5U649 245 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 MFSD14CQ5VZR4 134 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 GPR142Q7Z601 462 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 NECAB2Q7Z6G3 386 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 DPP9Q86TI2 863 aa10.6□□□□□ -0.71
LDB1-203ENST00000461873 STK11IPQ8N1F8 1099 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms