RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 HTATSF1O43719 755 aaKnown RBP10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 SNRPBP14678 240 aaKnown RBP10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 SIK1P57059 783 aa10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 RIPK4P57078 832 aa10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 HYAL2Q12891 473 aa10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 ITPK1Q13572 414 aa10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 SF3A1Q15459 793 aaKnown RBP10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 ZNF827Q17R98 1081 aa10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 NCAPG2Q86XI2 1143 aa10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 SLC43A3Q8NBI5 491 aa10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 PNNQ9H307 717 aaKnown RBP10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 LIN7BQ9HAP6 207 aa10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 APAF1O14727 1248 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 NRLP54845 237 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 FCGRTP55899 365 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 AMIGO3Q86WK7 504 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 CCNJLQ8IV13 435 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 ZNF654Q8IZM8 581 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 SMARCC1Q92922 1105 aaPredicted RBP10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 OSMRQ99650 979 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 OXCT2Q9BYC2 517 aaPredicted RBP10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 PDGFDQ9GZP0 370 aaPredicted RBP10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 CAPN10Q9HC96 672 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 PPP4R2Q9NY27 417 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 CCNL1Q9UK58 526 aaPredicted RBP10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 PHF24Q9UPV7 400 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 MAPK8IP3Q9UPT6 1336 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 KCPQ6ZWJ8 1503 aa10.47□□□□□ -0.73
ECHDC1-212ENST00000461239 TMEM238LA0A1B0GVL6 79 aa10.46□□□□□ -0.73
ECHDC1-212ENST00000461239 CTBSQ01459 385 aa10.46□□□□□ -0.73
ECHDC1-212ENST00000461239 MAP3K10Q02779 954 aa10.46□□□□□ -0.73
ECHDC1-212ENST00000461239 R3HDM1Q15032 1099 aaKnown RBP10.46□□□□□ -0.73
ECHDC1-212ENST00000461239 LINC00116Q8NCU8 138 aa10.46□□□□□ -0.73
ECHDC1-212ENST00000461239 NSUN5Q96P11 429 aaKnown RBP10.46□□□□□ -0.73
ECHDC1-212ENST00000461239 NOC4LQ9BVI4 516 aaKnown RBP10.46□□□□□ -0.73
ECHDC1-212ENST00000461239 DZANK1Q9NVP4 752 aa10.46□□□□□ -0.73
ECHDC1-212ENST00000461239 TTF2Q9UNY4 1162 aaKnown RBP10.46□□□□□ -0.73
ECHDC1-212ENST00000461239 CCER2I3L3R5 266 aa10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 NFKBIEO00221 500 aa10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 PPFIA3O75145 1194 aa10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 TRPA1O75762 1119 aa10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 XRCC5P13010 732 aaKnown RBP10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 GPLD1P80108 840 aa10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 SLC15A2Q16348 729 aa10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 SMIM5Q71RC9 77 aa10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 RTF1Q92541 710 aaKnown RBP10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 COPRSQ9NQ92 184 aa10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 MIS18AQ9NYP9 233 aa10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 PPM1HQ9ULR3 514 aa10.45□□□□□ -0.74
ECHDC1-212ENST00000461239 ZBTB42B2RXF5 422 aa10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 GPR25O00155 361 aa10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 NEFMP07197 916 aa10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 TEFQ10587 303 aa10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 ZNF790Q6PG37 636 aa10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 FAM9BQ8IZU0 186 aa10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 TRPM4Q8TD43 1214 aa10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 ZNF496Q96IT1 587 aaPredicted RBP10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 HHIPQ96QV1 700 aa10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 TAF1LQ8IZX4 1826 aa10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 UBR2Q8IWV8 1755 aa10.44□□□□□ -0.74
ECHDC1-212ENST00000461239 PRAMEF22A3QJZ6 481 aa10.43□□□□□ -0.74
ECHDC1-212ENST00000461239 BTBD11A6QL63 1104 aa10.43□□□□□ -0.74
ECHDC1-212ENST00000461239 GRIA4P48058 902 aa10.43□□□□□ -0.74
ECHDC1-212ENST00000461239 TAF7Q15545 349 aaPredicted RBP10.43□□□□□ -0.74
ECHDC1-212ENST00000461239 LCE2AQ5TA79 106 aaPredicted RBP10.43□□□□□ -0.74
ECHDC1-212ENST00000461239 TREML4Q6UXN2 200 aa10.43□□□□□ -0.74
ECHDC1-212ENST00000461239 DNAJC10Q8IXB1 793 aa10.43□□□□□ -0.74
ECHDC1-212ENST00000461239 UBXN4Q92575 508 aa10.43□□□□□ -0.74
ECHDC1-212ENST00000461239 BHLHE41Q9C0J9 482 aaPredicted RBP10.43□□□□□ -0.74
ECHDC1-212ENST00000461239 ZNF831Q5JPB2 1677 aa10.43□□□□□ -0.74
ECHDC1-212ENST00000461239 TJP1Q07157 1748 aa10.42□□□□□ -0.74
ECHDC1-212ENST00000461239 PNPLA7Q6ZV29 1317 aa10.42□□□□□ -0.74
ECHDC1-212ENST00000461239 C5P01031 1676 aa10.42□□□□□ -0.74
ECHDC1-212ENST00000461239 ITPKAP23677 461 aa10.42□□□□□ -0.74
ECHDC1-212ENST00000461239 DTHD1Q6ZMT9 781 aa10.42□□□□□ -0.74
ECHDC1-212ENST00000461239 TMEM102Q8N9M5 508 aaPredicted RBP10.42□□□□□ -0.74
ECHDC1-212ENST00000461239 TRERF1Q96PN7 1200 aa10.42□□□□□ -0.74
ECHDC1-212ENST00000461239 GMLQ99445 158 aa10.42□□□□□ -0.74
ECHDC1-212ENST00000461239 STK32BQ9NY57 414 aa10.42□□□□□ -0.74
ECHDC1-212ENST00000461239 C4BP0C0L5 1744 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 HEG1Q9ULI3 1381 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 CICQ96RK0 1608 aaPredicted RBP10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 CDC14CA4D256 554 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 METTL12A8MUP2 240 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 C2CD2LO14523 706 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 CYP19A1P11511 503 aaPredicted RBP10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 MLLT1Q03111 559 aaPredicted RBP10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 ZNF468Q5VIY5 522 aaPredicted RBP10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 INTS5Q6P9B9 1019 aaKnown RBP10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 VWA5B2Q8N398 1253 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 NANOS1Q8WY41 292 aaKnown RBP10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 TRIM56Q9BRZ2 755 aaKnown RBP10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 RSRP1Q9BUV0 290 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 KBTBD4Q9NVX7 518 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 AKAP2Q9Y2D5 859 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 INPP5FQ9Y2H2 1132 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 TUBGCP6Q96RT7 1819 aa10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 COL5A3P25940 1745 aaPredicted RBP10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 MYH14Q7Z406 1995 aaKnown RBP10.41□□□□□ -0.74
ECHDC1-212ENST00000461239 CASZ1Q86V15 1759 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms