RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 USP17L17D6RBQ6 530 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 USP17L19D6RCP7 530 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 USP17L20D6RJB6 530 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 GDF11O95390 407 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 USP17L24Q0WX57 530 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 GRB14Q14449 540 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 ZKSCAN2Q63HK3 967 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 SLC15A5A6NIM6 579 aa17.76■□□□□ 0.43
DNMT3A-207ENST00000461228 VCAM1P19320 739 aa17.76■□□□□ 0.43
DNMT3A-207ENST00000461228 ATP8B2P98198 1209 aa17.76■□□□□ 0.43
DNMT3A-207ENST00000461228 FAM109BQ6ICB4 259 aaPredicted RBP17.76■□□□□ 0.43
DNMT3A-207ENST00000461228 POTEEQ6S8J3 1075 aa17.76■□□□□ 0.43
DNMT3A-207ENST00000461228 SLC17A8Q8NDX2 589 aa17.76■□□□□ 0.43
DNMT3A-207ENST00000461228 ZMYND8Q9ULU4 1186 aaPredicted RBP17.76■□□□□ 0.43
DNMT3A-207ENST00000461228 GH2P01242 217 aa17.75■□□□□ 0.43
DNMT3A-207ENST00000461228 ZAP70P43403 619 aa17.75■□□□□ 0.43
DNMT3A-207ENST00000461228 TTC6Q86TZ1 520 aa17.75■□□□□ 0.43
DNMT3A-207ENST00000461228 CCAR1Q8IX12 1150 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-207ENST00000461228 FEZ1Q99689 392 aa17.75■□□□□ 0.43
DNMT3A-207ENST00000461228 PIH1D3Q9NQM4 214 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-207ENST00000461228 GREB1LQ9C091 1923 aaPredicted RBP17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 DNM1LO00429 736 aa17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 CNMDO75829 334 aa17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 OS9Q13438 667 aaPredicted RBP17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 MFSD14CQ5VZR4 134 aa17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 CATSPERGQ6ZRH7 1159 aa17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 ERC1Q8IUD2 1116 aa17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 DEFB123Q8N688 67 aa17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 LPAR1Q92633 364 aa17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 UBE2OQ9C0C9 1292 aaKnown RBP17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 SNRKQ9NRH2 765 aa17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 SPTBN5Q9NRC6 3674 aaKnown RBP17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 PRUNE2Q8WUY3 3088 aa17.74■□□□□ 0.43
DNMT3A-207ENST00000461228 SPDYE16A6NNV3 312 aaPredicted RBP17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 CYP7A1P22680 504 aa17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 PTPREP23469 700 aa17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 GABPAQ06546 454 aa17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 MAP3K12Q12852 859 aa17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 SHROOM1Q2M3G4 852 aaPredicted RBP17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 Q3C1V9 767 aa17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 SHCBP1Q8NEM2 672 aa17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 PAGR1Q9BTK6 254 aa17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 MTMR10Q9NXD2 777 aa17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 DDX20Q9UHI6 824 aaKnown RBP17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 PLXNA1Q9UIW2 1896 aa17.73■□□□□ 0.43
DNMT3A-207ENST00000461228 DLL1O00548 723 aa17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 SURF6O75683 361 aaKnown RBP17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 BCAR3O75815 825 aa17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 CCND3P30281 292 aaPredicted RBP17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 CCL14Q16627 93 aa17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 LRRC26Q2I0M4 334 aa17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 OLFML2BQ68BL8 750 aa17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 MB21D1Q8N884 522 aa17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 FRAT1Q92837 279 aaPredicted RBP17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 EDC3Q96F86 508 aaKnown RBP17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 IVNS1ABPQ9Y6Y0 642 aa17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
DNMT3A-207ENST00000461228 IDH1O75874 414 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 CYBAP13498 195 aa17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 SHMT1P34896 483 aa17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 USP5P45974 858 aa17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 TTF1Q15361 905 aaPredicted RBP17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 ABCB5Q2M3G0 1257 aa17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 ABRAQ8N0Z2 381 aa17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 EAF2Q96CJ1 260 aaPredicted RBP17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 TLR7Q9NYK1 1049 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 SAP30BPQ9UHR5 308 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-207ENST00000461228 STRNO43815 780 aa17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 SYN1P17600 705 aa17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 SNX17Q15036 470 aa17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 C1orf53Q5VUE5 145 aa17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 MAGEB6Q8N7X4 407 aa17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 CLUAP1Q96AJ1 413 aa17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 CWC22Q9HCG8 908 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 CABP5Q9NP86 173 aa17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 TNNQ9UQP3 1299 aa17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 MUC3AQ02505 3323 aa17.7■□□□□ 0.42
DNMT3A-207ENST00000461228 BAZ2AQ9UIF9 1905 aaKnown RBP17.69■□□□□ 0.42
DNMT3A-207ENST00000461228 DYNLL1P63167 89 aaKnown RBP17.69■□□□□ 0.42
DNMT3A-207ENST00000461228 HSP90AB4PQ58FF6 505 aa17.69■□□□□ 0.42
DNMT3A-207ENST00000461228 NRBP1Q9UHY1 535 aa17.69■□□□□ 0.42
DNMT3A-207ENST00000461228 PEX10O60683 326 aa17.68■□□□□ 0.42
DNMT3A-207ENST00000461228 RAB3GAP1Q15042 981 aa17.68■□□□□ 0.42
DNMT3A-207ENST00000461228 MIGA1Q8NAN2 632 aa17.68■□□□□ 0.42
DNMT3A-207ENST00000461228 FLRT1Q9NZU1 646 aa17.68■□□□□ 0.42
DNMT3A-207ENST00000461228 BTBD7Q9P203 1132 aa17.68■□□□□ 0.42
DNMT3A-207ENST00000461228 SWAP70Q9UH65 585 aa17.68■□□□□ 0.42
DNMT3A-207ENST00000461228 ZNFX1Q9P2E3 1918 aaKnown RBP17.68■□□□□ 0.42
DNMT3A-207ENST00000461228 POTEB2H3BUK9 544 aa17.67■□□□□ 0.42
DNMT3A-207ENST00000461228 GUCY1A2P33402 732 aa17.67■□□□□ 0.42
DNMT3A-207ENST00000461228 CEP85Q6P2H3 762 aa17.67■□□□□ 0.42
DNMT3A-207ENST00000461228 TMEM179Q6ZVK1 233 aa17.67■□□□□ 0.42
DNMT3A-207ENST00000461228 CRNKL1Q9BZJ0 848 aaKnown RBP17.67■□□□□ 0.42
DNMT3A-207ENST00000461228 RPAP3Q9H6T3 665 aaPredicted RBP17.67■□□□□ 0.42
DNMT3A-207ENST00000461228 SH2D4AQ9H788 454 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms