RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 OXR1Q8N573 874 aa4.96□□□□□ -1.62
SYPL1-203ENST00000460770 RIN3Q8TB24 985 aa4.96□□□□□ -1.62
SYPL1-203ENST00000460770 DHX38Q92620 1227 aaKnown RBP4.96□□□□□ -1.62
SYPL1-203ENST00000460770 NSUN3Q9H649 340 aaKnown RBP4.96□□□□□ -1.62
SYPL1-203ENST00000460770 DCP1AQ9NPI6 582 aaPredicted RBP4.96□□□□□ -1.62
SYPL1-203ENST00000460770 TJP2Q9UDY2 1190 aa4.96□□□□□ -1.62
SYPL1-203ENST00000460770 XPCQ01831 940 aaPredicted RBP4.95□□□□□ -1.62
SYPL1-203ENST00000460770 SPOCD1Q6ZMY3 1216 aa4.95□□□□□ -1.62
SYPL1-203ENST00000460770 CREG2Q8IUH2 290 aa4.95□□□□□ -1.62
SYPL1-203ENST00000460770 SIAH1Q8IUQ4 282 aa4.95□□□□□ -1.62
SYPL1-203ENST00000460770 LRRC56Q8IYG6 542 aaPredicted RBP4.95□□□□□ -1.62
SYPL1-203ENST00000460770 CYB5D2Q8WUJ1 264 aa4.95□□□□□ -1.62
SYPL1-203ENST00000460770 DIRC2Q96SL1 478 aa4.95□□□□□ -1.62
SYPL1-203ENST00000460770 CEP131Q9UPN4 1083 aa4.95□□□□□ -1.62
SYPL1-203ENST00000460770 PCDHB5Q9Y5E4 795 aa4.95□□□□□ -1.62
SYPL1-203ENST00000460770 ANKRD33BA6NCL7 494 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 TCAF2A6NFQ2 919 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.94□□□□□ -1.62
SYPL1-203ENST00000460770 TPP2P29144 1249 aaPredicted RBP4.94□□□□□ -1.62
SYPL1-203ENST00000460770 LTKP29376 864 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 TNNI2P48788 182 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 CDK8P49336 464 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 HK2P52789 917 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 PWP1Q13610 501 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 MLECQ14165 292 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 LILRA2Q8N149 483 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 FAM13CQ8NE31 585 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 JARID2Q92833 1246 aaPredicted RBP4.94□□□□□ -1.62
SYPL1-203ENST00000460770 SLC26A8Q96RN1 970 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 DPH2Q9BQC3 489 aaPredicted RBP4.94□□□□□ -1.62
SYPL1-203ENST00000460770 BCL11AQ9H165 835 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 C19orf73Q9NVV2 129 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 DUSP13Q9UII6 198 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 CNTNAP4Q9C0A0 1308 aa4.94□□□□□ -1.62
SYPL1-203ENST00000460770 FITM1A5D6W6 292 aa4.93□□□□□ -1.62
SYPL1-203ENST00000460770 PLCG1P19174 1290 aa4.93□□□□□ -1.62
SYPL1-203ENST00000460770 TFE3P19532 575 aaPredicted RBP4.93□□□□□ -1.62
SYPL1-203ENST00000460770 SND1Q7KZF4 910 aaKnown RBP eCLIP4.93□□□□□ -1.624e-14■■■■■ 37.4
SYPL1-203ENST00000460770 SPPL2CQ8IUH8 684 aa4.93□□□□□ -1.62
SYPL1-203ENST00000460770 PDZD8Q8NEN9 1154 aa4.93□□□□□ -1.62
SYPL1-203ENST00000460770 GPR62Q9BZJ7 368 aa4.93□□□□□ -1.62
SYPL1-203ENST00000460770 ASCC2Q9H1I8 757 aaPredicted RBP4.93□□□□□ -1.62
SYPL1-203ENST00000460770 MRS2Q9HD23 443 aa4.93□□□□□ -1.62
SYPL1-203ENST00000460770 DNAJC25-GNG10A0A024R161 153 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 HPXP02790 462 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 ESR1P03372 595 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 CFPP27918 469 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 DAB2P98082 770 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 CHRNEQ04844 493 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 EGR3Q06889 387 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 DUSP4Q13115 394 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 CIAPIN1Q6FI81 312 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 TSPYL5Q86VY4 417 aaPredicted RBP4.92□□□□□ -1.62
SYPL1-203ENST00000460770 RELL1Q8IUW5 271 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 SLFN12Q8IYM2 578 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 DNAJB8Q8NHS0 232 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 RNF141Q8WVD5 230 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 ACSF2Q96CM8 615 aaPredicted RBP4.92□□□□□ -1.62
SYPL1-203ENST00000460770 CRELD1Q96HD1 420 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 ASPNQ9BXN1 380 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 SLC6A17Q9H1V8 727 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 PARP2Q9UGN5 583 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 TIMELESSQ9UNS1 1208 aa4.92□□□□□ -1.62
SYPL1-203ENST00000460770 C1QTNF9P0C862 333 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 ZSCAN22P10073 491 aaPredicted RBP4.91□□□□□ -1.62
SYPL1-203ENST00000460770 GLDCP23378 1020 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 LMNB2Q03252 620 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 CLEC16AQ2KHT3 1053 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 GAB4Q2WGN9 574 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 RALGPS1Q5JS13 557 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 TMEM201Q5SNT2 666 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 MEI1Q5TIA1 1274 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 IRF2BP1Q8IU81 584 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 DTWD2Q8NBA8 298 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 PHC3Q8NDX5 983 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 KCNN1Q92952 543 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 CCDC74BQ96LY2 380 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
SYPL1-203ENST00000460770 DUSP15Q9H1R2 295 aaPredicted RBP4.91□□□□□ -1.62
SYPL1-203ENST00000460770 CWC22Q9HCG8 908 aaKnown RBP4.91□□□□□ -1.62
SYPL1-203ENST00000460770 CILPO75339 1184 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 MED14OSP0DP75 135 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 SRFP11831 508 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 SNX17Q15036 470 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 KCNA10Q16322 511 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 ATG14Q6ZNE5 492 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 TMC4Q7Z404 712 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 GATAD2BQ8WXI9 593 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 Q96M66 194 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 ADAMTS10Q9H324 1103 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 RAPGEFL1Q9UHV5 662 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 TLR6Q9Y2C9 796 aa4.9□□□□□ -1.63
SYPL1-203ENST00000460770 NPIPB6E9PJ23 425 aa4.89□□□□□ -1.63
SYPL1-203ENST00000460770 SORBS3O60504 671 aa4.89□□□□□ -1.63
SYPL1-203ENST00000460770 ERCC3P19447 782 aa4.89□□□□□ -1.63
SYPL1-203ENST00000460770 RNF4P78317 190 aa4.89□□□□□ -1.63
SYPL1-203ENST00000460770 CAMK2GQ13555 558 aaPredicted RBP4.89□□□□□ -1.63
SYPL1-203ENST00000460770 NR0B2Q15466 257 aa4.89□□□□□ -1.63
SYPL1-203ENST00000460770 SNAP47Q5SQN1 464 aa4.89□□□□□ -1.63
SYPL1-203ENST00000460770 AMIGO3Q86WK7 504 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms