RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 POTEB2H3BUK9 544 aa19.84■□□□□ 0.77
CHRD-208ENST00000460627 CWC15Q9P013 229 aaKnown RBP19.84■□□□□ 0.77
CHRD-208ENST00000460627 LUC7L2Q9Y383 392 aaKnown RBP19.84■□□□□ 0.77
CHRD-208ENST00000460627 PLEKHG2Q9H7P9 1386 aa19.84■□□□□ 0.77
CHRD-208ENST00000460627 DYNLL1P63167 89 aaKnown RBP19.84■□□□□ 0.77
CHRD-208ENST00000460627 NCAPH2Q6IBW4 605 aa19.84■□□□□ 0.77
CHRD-208ENST00000460627 LRRC47Q8N1G4 583 aaKnown RBP19.84■□□□□ 0.77
CHRD-208ENST00000460627 FBXO18Q8NFZ0 1043 aa19.84■□□□□ 0.77
CHRD-208ENST00000460627 ARHGEF1Q92888 912 aaKnown RBP19.84■□□□□ 0.77
CHRD-208ENST00000460627 CCDC42Q96M95 316 aa19.84■□□□□ 0.77
CHRD-208ENST00000460627 MRPL11Q9Y3B7 192 aaKnown RBP19.84■□□□□ 0.77
CHRD-208ENST00000460627 PAXBP1Q9Y5B6 917 aa19.84■□□□□ 0.77
CHRD-208ENST00000460627 ADGRB1O14514 1584 aa19.83■□□□□ 0.77
CHRD-208ENST00000460627 KCNQ2O43526 872 aa19.83■□□□□ 0.77
CHRD-208ENST00000460627 HS1BP3Q53T59 392 aa19.83■□□□□ 0.77
CHRD-208ENST00000460627 PUS7LQ9H0K6 701 aaKnown RBP19.83■□□□□ 0.77
CHRD-208ENST00000460627 CCDC175P0C221 793 aa19.83■□□□□ 0.77
CHRD-208ENST00000460627 CTNNA2P26232 953 aa19.83■□□□□ 0.77
CHRD-208ENST00000460627 RNF26Q9BY78 433 aaPredicted RBP19.83■□□□□ 0.77
CHRD-208ENST00000460627 NT5C3AQ9H0P0 336 aa19.83■□□□□ 0.77
CHRD-208ENST00000460627 LEKR1Q6ZMV7 388 aa19.83■□□□□ 0.76
CHRD-208ENST00000460627 APBB1IPQ7Z5R6 666 aaPredicted RBP19.83■□□□□ 0.76
CHRD-208ENST00000460627 LCORLQ8N3X6 602 aa19.83■□□□□ 0.76
CHRD-208ENST00000460627 PSTPIP2Q9H939 334 aa19.83■□□□□ 0.76
CHRD-208ENST00000460627 LMBRD1Q9NUN5 540 aa19.83■□□□□ 0.76
CHRD-208ENST00000460627 FRMD4BQ9Y2L6 1034 aa19.83■□□□□ 0.76
CHRD-208ENST00000460627 CNGA4Q8IV77 575 aa19.83■□□□□ 0.76
CHRD-208ENST00000460627 TMEM87AQ8NBN3 555 aa19.83■□□□□ 0.76
CHRD-208ENST00000460627 TAOK3Q9H2K8 898 aa19.83■□□□□ 0.76
CHRD-208ENST00000460627 CABP7Q86V35 215 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 JADE2Q9NQC1 790 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 CEP135Q66GS9 1140 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 FBXO11Q86XK2 927 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 CCDC102AQ96A19 550 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 IFT74Q96LB3 600 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 PIH1D3Q9NQM4 214 aaKnown RBP19.82■□□□□ 0.76
CHRD-208ENST00000460627 SPATA31A1Q5TZJ5 1347 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 TXNRD1Q16881 649 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 ASPRV1Q53RT3 343 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 CTNNBL1Q8WYA6 563 aaPredicted RBP19.82■□□□□ 0.76
CHRD-208ENST00000460627 CSRNP1Q96S65 589 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 MINPP1Q9UNW1 487 aa19.82■□□□□ 0.76
CHRD-208ENST00000460627 CETN3O15182 167 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 EPB41P11171 864 aaKnown RBP19.81■□□□□ 0.76
CHRD-208ENST00000460627 PRPHP41219 470 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 DCPSQ96C86 337 aaKnown RBP19.81■□□□□ 0.76
CHRD-208ENST00000460627 ZKSCAN5Q9Y2L8 839 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 NOP56O00567 594 aaKnown RBP19.81■□□□□ 0.76
CHRD-208ENST00000460627 KIF5AQ12840 1032 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 PABPC4Q13310 644 aaKnown RBP eCLIP19.81■□□□□ 0.76
CHRD-208ENST00000460627 POSTNQ15063 836 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 USP28Q96RU2 1077 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 KANSL2Q9H9L4 492 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 NEURL4Q96JN8 1562 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 DTNBO60941 627 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 TACC1O75410 805 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 MCAMP43121 646 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 ZNF445P59923 1031 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 FAM193AP78312 1265 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 SCRN1Q12765 414 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 PRPF4BQ13523 1007 aaKnown RBP19.81■□□□□ 0.76
CHRD-208ENST00000460627 EAPPQ56P03 285 aaPredicted RBP19.81■□□□□ 0.76
CHRD-208ENST00000460627 SPECC1Q5M775 1068 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 HOMER2Q9NSB8 354 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 VWDEQ8N2E2 1590 aa19.81■□□□□ 0.76
CHRD-208ENST00000460627 KRT86O43790 486 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 HERC4Q5GLZ8 1057 aaPredicted RBP19.8■□□□□ 0.76
CHRD-208ENST00000460627 RC3H1Q5TC82 1133 aaKnown RBP19.8■□□□□ 0.76
CHRD-208ENST00000460627 TBC1D9BQ66K14 1250 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 CMTR1Q8N1G2 835 aaKnown RBP19.8■□□□□ 0.76
CHRD-208ENST00000460627 MRVI1Q9Y6F6 885 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 USP17L3A6NCW0 530 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 USP17L4A6NCW7 530 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 USP17L1Q7RTZ2 530 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 SMCR8Q8TEV9 937 aaPredicted RBP19.8■□□□□ 0.76
CHRD-208ENST00000460627 SYNCQ9H7C4 482 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 BIN2Q9UBW5 565 aaPredicted RBP19.8■□□□□ 0.76
CHRD-208ENST00000460627 EXOC7Q9UPT5 735 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 DCCP43146 1447 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 DALRD3Q5D0E6 543 aaKnown RBP19.8■□□□□ 0.76
CHRD-208ENST00000460627 BARGINQ6ZT62 677 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 NEK8Q86SG6 692 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 USP32Q8NFA0 1604 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 FOSP01100 380 aaPredicted RBP19.8■□□□□ 0.76
CHRD-208ENST00000460627 PTGS1P23219 599 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 MECOMQ03112 1051 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 TBC1D8BQ0IIM8 1120 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 NLRX1Q86UT6 975 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 KCNG1Q9UIX4 513 aa19.8■□□□□ 0.76
CHRD-208ENST00000460627 GSTTP1A0A1W2PQM5 241 aa19.79■□□□□ 0.76
CHRD-208ENST00000460627 BTBD18B2RXH4 712 aa19.79■□□□□ 0.76
CHRD-208ENST00000460627 PRKAB2O43741 272 aa19.79■□□□□ 0.76
CHRD-208ENST00000460627 PAK1Q13153 545 aa19.79■□□□□ 0.76
CHRD-208ENST00000460627 GRIPAP1Q4V328 841 aa19.79■□□□□ 0.76
CHRD-208ENST00000460627 CSGALNACT2Q8N6G5 542 aa19.79■□□□□ 0.76
CHRD-208ENST00000460627 CD163L1Q9NR16 1453 aa19.79■□□□□ 0.76
CHRD-208ENST00000460627 FRMPD2Q68DX3 1309 aaPredicted RBP19.79■□□□□ 0.76
CHRD-208ENST00000460627 KDM3AQ9Y4C1 1321 aa19.79■□□□□ 0.76
CHRD-208ENST00000460627 TTLL1O95922 423 aa19.79■□□□□ 0.76
CHRD-208ENST00000460627 NLRP12P59046 1061 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms