RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 TRDNQ13061 729 aa17.55■□□□□ 0.4
SSR4-206ENST00000460616 E2F4Q16254 413 aa17.55■□□□□ 0.4
SSR4-206ENST00000460616 LMBR1LQ6UX01 489 aa17.55■□□□□ 0.4
SSR4-206ENST00000460616 TRIML1Q8N9V2 468 aa17.55■□□□□ 0.4
SSR4-206ENST00000460616 MYO6Q9UM54 1294 aa17.55■□□□□ 0.4
SSR4-206ENST00000460616 COL5A3P25940 1745 aaPredicted RBP17.54■□□□□ 0.4
SSR4-206ENST00000460616 TNS1Q9HBL0 1735 aaKnown RBP17.54■□□□□ 0.4
SSR4-206ENST00000460616 LOC102724428A0A0B4J2F2 783 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 MFAP3LO75121 409 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 PRPF6O94906 941 aaKnown RBP17.54■□□□□ 0.4
SSR4-206ENST00000460616 A1BGP04217 495 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 CASP14P31944 242 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 SIK1P57059 783 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 ITPK1Q13572 414 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 TRIM29Q14134 588 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 GPATCH11Q8N954 259 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 ACRBPQ8NEB7 543 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 PHKBQ93100 1093 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 ZMYM6O95789 1325 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 FOXP2O15409 715 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 METAP2P50579 478 aaKnown RBP eCLIP17.54■□□□□ 0.43e-6■■■■□ 21.8
SSR4-206ENST00000460616 SWT1Q5T5J6 900 aaKnown RBP17.54■□□□□ 0.4
SSR4-206ENST00000460616 MCTP2Q6DN12 878 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 APTXQ7Z2E3 356 aaKnown RBP17.54■□□□□ 0.4
SSR4-206ENST00000460616 MYO1AQ9UBC5 1043 aa17.54■□□□□ 0.4
SSR4-206ENST00000460616 ZNF213O14771 459 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 AKAP17AQ02040 695 aaKnown RBP17.53■□□□□ 0.4
SSR4-206ENST00000460616 NCAPH2Q6IBW4 605 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
SSR4-206ENST00000460616 ATG9AQ7Z3C6 839 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 CNGA4Q8IV77 575 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 GRAMD1CQ8IYS0 662 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 NBPF26B4DH59 902 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 ATP5J2-PTCD1G3V325 749 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 ATP6V1AP38606 617 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSR4-206ENST00000460616 NBPF14Q5TI25 921 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 NBPF10Q6P3W6 841 aaKnown RBP17.53■□□□□ 0.4
SSR4-206ENST00000460616 STK11IPQ8N1F8 1099 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 NBPF15Q8N660 670 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 SMARCC1Q92922 1105 aaPredicted RBP17.53■□□□□ 0.4
SSR4-206ENST00000460616 GPR108Q9NPR9 543 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 WWC3Q9ULE0 1092 aa17.53■□□□□ 0.4
SSR4-206ENST00000460616 RXRAP19793 462 aa17.52■□□□□ 0.4
SSR4-206ENST00000460616 PBX1P40424 430 aa17.52■□□□□ 0.4
SSR4-206ENST00000460616 MAP9Q49MG5 647 aa17.52■□□□□ 0.4
SSR4-206ENST00000460616 CCDC91Q7Z6B0 441 aa17.52■□□□□ 0.4
SSR4-206ENST00000460616 TMTC1Q8IUR5 882 aa17.52■□□□□ 0.4
SSR4-206ENST00000460616 CCDC51Q96ER9 411 aa17.52■□□□□ 0.4
SSR4-206ENST00000460616 ADD3Q9UEY8 706 aaKnown RBP17.52■□□□□ 0.4
SSR4-206ENST00000460616 HPCAL4Q9UM19 191 aa17.52■□□□□ 0.4
SSR4-206ENST00000460616 CICQ96RK0 1608 aaPredicted RBP17.52■□□□□ 0.39
SSR4-206ENST00000460616 CHRM1P11229 460 aaPredicted RBP17.52■□□□□ 0.39
SSR4-206ENST00000460616 MCM3P25205 808 aa17.52■□□□□ 0.39
SSR4-206ENST00000460616 FILIP1LQ4L180 1135 aa17.52■□□□□ 0.39
SSR4-206ENST00000460616 SPATA1Q5VX52 437 aa17.52■□□□□ 0.39
SSR4-206ENST00000460616 CTAGE1Q96RT6 745 aa17.52■□□□□ 0.39
SSR4-206ENST00000460616 CEP89Q96ST8 783 aa17.52■□□□□ 0.39
SSR4-206ENST00000460616 WDR19Q8NEZ3 1342 aa17.51■□□□□ 0.39
SSR4-206ENST00000460616 ERLIN2O94905 339 aa17.51■□□□□ 0.39
SSR4-206ENST00000460616 FXR1P51114 621 aaKnown RBP eCLIP17.51■□□□□ 0.39
SSR4-206ENST00000460616 AMPD2Q01433 879 aa17.51■□□□□ 0.39
SSR4-206ENST00000460616 GRIN1Q05586 938 aa17.51■□□□□ 0.39
SSR4-206ENST00000460616 KANK3Q6NY19 840 aa17.51■□□□□ 0.39
SSR4-206ENST00000460616 ANGEL1Q9UNK9 670 aaKnown RBP17.51■□□□□ 0.39
SSR4-206ENST00000460616 MAP3K15Q6ZN16 1313 aa17.51■□□□□ 0.39
SSR4-206ENST00000460616 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
SSR4-206ENST00000460616 USP14P54578 494 aa17.5■□□□□ 0.39
SSR4-206ENST00000460616 STIM1Q13586 685 aa17.5■□□□□ 0.39
SSR4-206ENST00000460616 LRP10Q7Z4F1 713 aa17.5■□□□□ 0.39
SSR4-206ENST00000460616 CDHR2Q9BYE9 1310 aa17.5■□□□□ 0.39
SSR4-206ENST00000460616 GYPCP04921 128 aa17.5■□□□□ 0.39
SSR4-206ENST00000460616 CYP19A1P11511 503 aaPredicted RBP17.5■□□□□ 0.39
SSR4-206ENST00000460616 ARHGAP25P42331 645 aa17.5■□□□□ 0.39
SSR4-206ENST00000460616 KLHL10Q6JEL2 608 aa17.5■□□□□ 0.39
SSR4-206ENST00000460616 RIN2Q8WYP3 895 aaPredicted RBP17.5■□□□□ 0.39
SSR4-206ENST00000460616 ZNF831Q5JPB2 1677 aa17.5■□□□□ 0.39
SSR4-206ENST00000460616 PTPREP23469 700 aa17.49■□□□□ 0.39
SSR4-206ENST00000460616 IL15P40933 162 aaPredicted RBP17.49■□□□□ 0.39
SSR4-206ENST00000460616 STX17P56962 302 aa17.49■□□□□ 0.39
SSR4-206ENST00000460616 COG1Q8WTW3 980 aa17.49■□□□□ 0.39
SSR4-206ENST00000460616 SEC31BQ9NQW1 1179 aa17.49■□□□□ 0.39
SSR4-206ENST00000460616 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
SSR4-206ENST00000460616 FBXO2Q9UK22 296 aaPredicted RBP17.49■□□□□ 0.39
SSR4-206ENST00000460616 FECHP22830 423 aa17.49■□□□□ 0.39
SSR4-206ENST00000460616 GGCXP38435 758 aa17.49■□□□□ 0.39
SSR4-206ENST00000460616 NOSTRINQ8IVI9 506 aa17.49■□□□□ 0.39
SSR4-206ENST00000460616 SPATA20Q8TB22 786 aa17.49■□□□□ 0.39
SSR4-206ENST00000460616 EBAG9O00559 213 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 SHOX2O60902 331 aaPredicted RBP17.48■□□□□ 0.39
SSR4-206ENST00000460616 ZFYP08048 801 aaPredicted RBP17.48■□□□□ 0.39
SSR4-206ENST00000460616 CCT5P48643 541 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 LIG3P49916 1009 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 CASP7P55210 303 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 ERVK-24P63145 666 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 CT47A1Q5JQC4 288 aaPredicted RBP17.48■□□□□ 0.39
SSR4-206ENST00000460616 LINC00116Q8NCU8 138 aa17.48■□□□□ 0.39
SSR4-206ENST00000460616 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms