RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 PPFIA4O75335 1185 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 STAM2O75886 525 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 A0A1B0GVL5 298 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 EVI5O60447 810 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 TROVE2P10155 538 aaKnown RBP eCLIP9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 SLC8A1P32418 973 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 CFAP221Q4G0U5 840 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 AKNAD1Q5T1N1 836 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 ELMSAN1Q6PJG2 1045 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 ASIC3Q9UHC3 531 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 TNFAIP1Q13829 316 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 WAPLQ7Z5K2 1190 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 XAGE3Q8WTP9 111 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 CCDC124Q96CT7 223 aaKnown RBP9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 ORC6Q9Y5N6 252 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 ABCD1P33897 745 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 CASC4Q6P4E1 433 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 URB2Q14146 1524 aaKnown RBP9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 ESYT2A0FGR8 921 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 INPP5BP32019 993 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 PDCD2Q16342 344 aaPredicted RBP9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 SPOUT1Q5T280 376 aaKnown RBP9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 DNAJC25Q9H1X3 360 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 SRGAP2BP0DMP2 458 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 ARHGAP4P98171 946 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 CDR2Q01850 454 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 TMTC1Q8IUR5 882 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 DACT1Q9NYF0 836 aa9.81□□□□□ -0.84
SHROOM4-203ENST00000460112 PDE1AP54750 535 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 PUM3Q15397 648 aaKnown RBP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 TSPYL2Q9H2G4 693 aaPredicted RBP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 AS3MTQ9HBK9 375 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 MYO1AQ9UBC5 1043 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 ZRANB1Q9UGI0 708 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 LMNB1P20700 586 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 PPP1R2P3Q6NXS1 205 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 APOBRQ0VD83 1088 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 PAK1Q13153 545 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 NMIQ13287 307 aaPredicted RBP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 CCDC68Q9H2F9 335 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 ARHGEF5Q12774 1597 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 NLRX1Q86UT6 975 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 TEX11Q8IYF3 940 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 RSAD2Q8WXG1 361 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 DRC3Q9H069 523 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 DCTPP1Q9H773 170 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 CROCC2H7BZ55 1655 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 RLBP1P12271 317 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 ATP8B2P98198 1209 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 PABPC4Q13310 644 aaKnown RBP eCLIP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 KRT81Q14533 505 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 TRAPPC3LQ5T215 181 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 IGSF22Q8N9C0 903 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 EIF2AQ9BY44 585 aaKnown RBP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 DNM3Q9UQ16 869 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 MYH6P13533 1939 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 UHRF1BP1LA0JNW5 1464 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 RHOXF2BP0C7M4 288 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 HPDP32754 393 aaPredicted RBP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 COG7P83436 770 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 ANKRD20A3Q5VUR7 823 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 CCDC186Q7Z3E2 898 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 MLKLQ8NB16 471 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 BBOF1Q8ND07 529 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 RHOXF2Q9BQY4 288 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 GDPD2Q9HCC8 539 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 TYW1Q9NV66 732 aaKnown RBP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 STK32BQ9NY57 414 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 CTTNBP2NLQ9P2B4 639 aa9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 BLMP54132 1417 aaPredicted RBP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 VIRMAQ69YN4 1812 aaKnown RBP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 GPATCH8Q9UKJ3 1502 aaKnown RBP9.8□□□□□ -0.84
SHROOM4-203ENST00000460112 VWA3AA6NCI4 1184 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 SDSP20132 328 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 GARSP41250 739 aaKnown RBP9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 NONOQ15233 471 aaKnown RBP eCLIP9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 RIC8AQ9NPQ8 531 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 LARSQ9P2J5 1176 aaKnown RBP9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 KIAA0556O60303 1618 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 ARHGAP31Q2M1Z3 1444 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 PTPDC1A2A3K4 754 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 KRT12Q99456 494 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 DCAF5Q96JK2 942 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 RNF40O75150 1001 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 HARSP12081 509 aaKnown RBP9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 GNPTABQ3T906 1256 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 CDC37L1Q7L3B6 337 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 VSIG1Q86XK7 387 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 LINS1Q8NG48 757 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 IRS4O14654 1257 aaPredicted RBP9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 PDE4DQ08499 809 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 PALM2Q8IXS6 379 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 NDUFAB1O14561 156 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 MAN1A1P33908 653 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 EVCP57679 992 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 PRPSAP1Q14558 356 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 SFMBT2Q5VUG0 894 aa9.79□□□□□ -0.84
SHROOM4-203ENST00000460112 ZNF500O60304 480 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms